Gene annotation
Transcriptome id Sobic.001G381500.2
Synonym Sb01g036190
Functional annotation lung seven transmembrane domain containing protein, putative, expressed
UniProt A0A1Z5SA82
Pfam PF06814
Panther DB PTHR21229 PTHR21229:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G61670 : Lung seven transmembrane receptor family protein
RAP-DB (Rice) LOC_Os03g21690.1 : lung seven transmembrane domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002344 , Zm00025a052426
Brachypodium KQK21804
Barley HORVU4Hr1G050360.2 , HORVU4Hr1G050360.3 , HORVU4Hr1G050360.1
Wheat TraesCS4B02G170300 , TraesCS4D02G172300 , TraesCS4A02G134900
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G381500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G154300 DNA binding protein, putative, expressed -
2 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
3 Sobic.001G433600 - -
4 Sobic.007G189100 SFC, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
5 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
6 Sobic.009G080600 expressed protein -
7 Sobic.010G269800 Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed K06640: serine/threonine-protein kinase ATR
8 Sobic.002G392400 expressed protein -
9 Sobic.004G306100 expressed protein -
10 Sobic.002G192900 expressed protein -
11 Sobic.007G111300 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
12 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
13 Sobic.004G353300 growth regulator related protein, putative, expressed -
14 Sobic.001G361200 expressed protein -
15 Sobic.006G095000 PPR repeat domain containing protein, putative, expressed -
16 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
17 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.003G045000 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
19 Sobic.002G260700 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
20 Sobic.001G248400 expressed protein -


Gene co-expression network
sample Sobic001G381500 Sobic001G381500 Sobic001G154300 Sobic001G154300 Sobic001G381500--Sobic001G154300 Sobic002G308000 Sobic002G308000 Sobic001G381500--Sobic002G308000 Sobic001G433600 Sobic001G433600 Sobic001G381500--Sobic001G433600 Sobic007G189100 Sobic007G189100 Sobic001G381500--Sobic007G189100 Sobic002G193500 Sobic002G193500 Sobic001G381500--Sobic002G193500 Sobic009G080600 Sobic009G080600 Sobic001G381500--Sobic009G080600 Sobic010G269800 Sobic010G269800 Sobic001G381500--Sobic010G269800 Sobic002G392400 Sobic002G392400 Sobic001G381500--Sobic002G392400 Sobic004G306100 Sobic004G306100 Sobic001G381500--Sobic004G306100 Sobic001G154300--Sobic001G381500 Sobic004G328300 Sobic004G328300 Sobic001G154300--Sobic004G328300 Sobic001G361200 Sobic001G361200 Sobic001G154300--Sobic001G361200 Sobic001G023500 Sobic001G023500 Sobic001G154300--Sobic001G023500 Sobic002G192900 Sobic002G192900 Sobic001G154300--Sobic002G192900 Sobic001G154300--Sobic004G306100 Sobic001G248400 Sobic001G248400 Sobic001G154300--Sobic001G248400 Sobic001G154300--Sobic002G308000 Sobic006G127200 Sobic006G127200 Sobic001G154300--Sobic006G127200 Sobic002G308000--Sobic002G392400 Sobic007G105700 Sobic007G105700 Sobic002G308000--Sobic007G105700 Sobic001G117900 Sobic001G117900 Sobic002G308000--Sobic001G117900 Sobic002G308000--Sobic001G433600 Sobic003G293400 Sobic003G293400 Sobic002G308000--Sobic003G293400 Sobic010G253200 Sobic010G253200 Sobic002G308000--Sobic010G253200 Sobic001G131900 Sobic001G131900 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G308000--Sobic002G192900 Sobic001G433600--Sobic001G117900 Sobic001G433600--Sobic002G308000 Sobic005G060100 Sobic005G060100 Sobic001G433600--Sobic005G060100 Sobic001G433600--Sobic007G105700 Sobic009G054400 Sobic009G054400 Sobic001G433600--Sobic009G054400 Sobic004G298600 Sobic004G298600 Sobic001G433600--Sobic004G298600 Sobic001G433600--Sobic007G189100 Sobic001G433600--Sobic001G131900 Sobic007G086600 Sobic007G086600 Sobic001G433600--Sobic007G086600 Sobic007G189100--Sobic001G433600 Sobic003G200000 Sobic003G200000 Sobic007G189100--Sobic003G200000 Sobic001G308500 Sobic001G308500 Sobic007G189100--Sobic001G308500 Sobic007G189100--Sobic001G131900 Sobic007G189100--Sobic002G392400 Sobic005G045800 Sobic005G045800 Sobic007G189100--Sobic005G045800 Sobic007G043700 Sobic007G043700 Sobic007G189100--Sobic007G043700 Sobic003G352900 Sobic003G352900 Sobic007G189100--Sobic003G352900 Sobic004G353300 Sobic004G353300 Sobic007G189100--Sobic004G353300 Sobic002G193500--Sobic007G086600 Sobic002G193500--Sobic007G111300 Sobic002G193500--Sobic001G117900 Sobic002G193500--Sobic002G392400 Sobic006G232800 Sobic006G232800 Sobic002G193500--Sobic006G232800 Sobic008G072500 Sobic008G072500 Sobic002G193500--Sobic008G072500 Sobic002G193500--Sobic002G308000 Sobic002G201700 Sobic002G201700 Sobic002G193500--Sobic002G201700 Sobic003G004800 Sobic003G004800 Sobic002G193500--Sobic003G004800 Sobic009G080600--Sobic010G269800 Sobic009G080600--Sobic001G248400 Sobic007G102000 Sobic007G102000 Sobic009G080600--Sobic007G102000 Sobic009G080600--Sobic002G308000 Sobic001G139900 Sobic001G139900 Sobic009G080600--Sobic001G139900 Sobic009G080600--Sobic002G192900 Sobic002G390800 Sobic002G390800 Sobic009G080600--Sobic002G390800 SobicK040800 SobicK040800 Sobic009G080600--SobicK040800 Sobic008G004900 Sobic008G004900 Sobic009G080600--Sobic008G004900 Sobic010G269800--Sobic002G308000 Sobic010G269800--Sobic007G102000 Sobic010G269800--Sobic009G080600 Sobic010G269800--Sobic010G253200 Sobic010G269800--Sobic002G390800 Sobic010G269800--Sobic008G004900 Sobic010G269800--Sobic002G192900 Sobic010G018900 Sobic010G018900 Sobic010G269800--Sobic010G018900 Sobic009G042000 Sobic009G042000 Sobic010G269800--Sobic009G042000 Sobic002G392400--Sobic007G105700 Sobic002G392400--Sobic002G308000 Sobic002G392400--Sobic001G117900 Sobic002G348400 Sobic002G348400 Sobic002G392400--Sobic002G348400 Sobic002G313100 Sobic002G313100 Sobic002G392400--Sobic002G313100 Sobic002G392400--Sobic003G293400 Sobic002G392400--Sobic001G131900 Sobic002G392400--Sobic006G232800 Sobic010G153400 Sobic010G153400 Sobic002G392400--Sobic010G153400 Sobic002G271400 Sobic002G271400 Sobic004G306100--Sobic002G271400 Sobic010G103500 Sobic010G103500 Sobic004G306100--Sobic010G103500 Sobic003G411700 Sobic003G411700 Sobic004G306100--Sobic003G411700 Sobic003G315700 Sobic003G315700 Sobic004G306100--Sobic003G315700 Sobic004G306100--Sobic006G127200 Sobic003G409600 Sobic003G409600 Sobic004G306100--Sobic003G409600 Sobic002G260700 Sobic002G260700 Sobic004G306100--Sobic002G260700 Sobic002G123600 Sobic002G123600 Sobic004G306100--Sobic002G123600 Sobic010G052400 Sobic010G052400 Sobic004G306100--Sobic010G052400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.