Gene annotation
Transcriptome id Sobic.010G269800.1
Synonym ATRAD3, Sb10g030475, ATATR, ATR
Functional annotation Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed
UniProt A0A1W0VV41
Pfam PF02260 PF08064 PF00454 PF02259
Panther DB PTHR11139 PTHR11139:SF69
NCBI CDD -
KEGG Orthology K06640; serine/threonine-protein kinase ATR
Gene Ontology GO:0005515; protein binding GO:0004674protein serine/threonine kinase activity GO:0016773phosphotransferase activity, alcohol group as acceptor


Orthologs (automatic annotation)
TAIR AT5G40820 : Ataxia telangiectasia-mutated and RAD3-related
RAP-DB (Rice) LOC_Os06g50910.1 : Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed
MaizeGDB (Corn) Zm00025a018514
Brachypodium KQK16693
Barley HORVU7Hr1G118750.9 , HORVU7Hr1G118750.8 , HORVU7Hr1G118750.3 , HORVU7Hr1G118750.2 , HORVU7Hr1G118750.1 , HORVU7Hr1G118750.7 , HORVU7Hr1G118750.6 , HORVU7Hr1G118750.5 , HORVU7Hr1G118750.4 , HORVU7Hr1G118750.22 , HORVU7Hr1G118750.20 , HORVU7Hr1G118750.21 , HORVU7Hr1G118750.26 , HORVU7Hr1G118750.27 , HORVU7Hr1G118750.24 , HORVU7Hr1G118750.25 , HORVU7Hr1G118750.19 , HORVU7Hr1G118750.18 , HORVU7Hr1G118750.13 , HORVU7Hr1G118750.12 , HORVU7Hr1G118750.10 , HORVU7Hr1G118750.17 , HORVU7Hr1G118750.16 , HORVU7Hr1G118750.14 , HORVU7Hr1G118750.11
Wheat TraesCS7A02G543400 , TraesCS7A02G543400 , TraesCS7D02G529300 , TraesCS1B02G298500 , TraesCS7B02G465500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
2 Sobic.007G102000 formin-like protein 13, putative, expressed -
3 Sobic.009G080600 expressed protein -
4 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
5 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
6 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
7 Sobic.002G192900 expressed protein -
8 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
9 Sobic.009G042000 expressed protein -
10 Sobic.001G323400 expressed protein -
11 Sobic.004G198300 expressed protein -
12 Sobic.008G073500 AAA-type ATPase family protein, putative, expressed -
13 Sobic.007G105700 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
15 Sobic.004G026600 - -
16 Sobic.001G248400 expressed protein -
17 Sobic.004G306100 expressed protein -
18 Sobic.001G433600 - -
19 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
20 Sobic.002G167100 phosphatidate cytidylyltransferase, putative, expressed K00981: E2.7.7.41, CDS1, CDS2, phosphatidate cytidylyltransferase


Gene co-expression network
sample Sobic010G269800 Sobic010G269800 Sobic002G308000 Sobic002G308000 Sobic010G269800--Sobic002G308000 Sobic007G102000 Sobic007G102000 Sobic010G269800--Sobic007G102000 Sobic009G080600 Sobic009G080600 Sobic010G269800--Sobic009G080600 Sobic010G253200 Sobic010G253200 Sobic010G269800--Sobic010G253200 Sobic002G390800 Sobic002G390800 Sobic010G269800--Sobic002G390800 Sobic008G004900 Sobic008G004900 Sobic010G269800--Sobic008G004900 Sobic002G192900 Sobic002G192900 Sobic010G269800--Sobic002G192900 Sobic010G018900 Sobic010G018900 Sobic010G269800--Sobic010G018900 Sobic009G042000 Sobic009G042000 Sobic010G269800--Sobic009G042000 Sobic002G392400 Sobic002G392400 Sobic002G308000--Sobic002G392400 Sobic007G105700 Sobic007G105700 Sobic002G308000--Sobic007G105700 Sobic001G117900 Sobic001G117900 Sobic002G308000--Sobic001G117900 Sobic001G433600 Sobic001G433600 Sobic002G308000--Sobic001G433600 Sobic003G293400 Sobic003G293400 Sobic002G308000--Sobic003G293400 Sobic002G308000--Sobic010G253200 Sobic001G131900 Sobic001G131900 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G308000--Sobic002G192900 Sobic009G214500 Sobic009G214500 Sobic007G102000--Sobic009G214500 Sobic008G085950 Sobic008G085950 Sobic007G102000--Sobic008G085950 Sobic008G073500 Sobic008G073500 Sobic007G102000--Sobic008G073500 Sobic004G241300 Sobic004G241300 Sobic007G102000--Sobic004G241300 Sobic007G102000--Sobic002G390800 Sobic001G385300 Sobic001G385300 Sobic007G102000--Sobic001G385300 Sobic004G298600 Sobic004G298600 Sobic007G102000--Sobic004G298600 Sobic007G102300 Sobic007G102300 Sobic007G102000--Sobic007G102300 Sobic007G102000--Sobic007G105700 Sobic009G080600--Sobic010G269800 Sobic001G248400 Sobic001G248400 Sobic009G080600--Sobic001G248400 Sobic009G080600--Sobic007G102000 Sobic009G080600--Sobic002G308000 Sobic001G139900 Sobic001G139900 Sobic009G080600--Sobic001G139900 Sobic009G080600--Sobic002G192900 Sobic009G080600--Sobic002G390800 SobicK040800 SobicK040800 Sobic009G080600--SobicK040800 Sobic009G080600--Sobic008G004900 Sobic002G420100 Sobic002G420100 Sobic010G253200--Sobic002G420100 Sobic010G253200--Sobic004G241300 Sobic003G423700 Sobic003G423700 Sobic010G253200--Sobic003G423700 Sobic008G104000 Sobic008G104000 Sobic010G253200--Sobic008G104000 Sobic010G253200--Sobic009G042000 Sobic002G186200 Sobic002G186200 Sobic010G253200--Sobic002G186200 Sobic004G261800 Sobic004G261800 Sobic010G253200--Sobic004G261800 Sobic010G253200--Sobic008G073500 Sobic010G253200--Sobic002G308000 Sobic001G082800 Sobic001G082800 Sobic002G390800--Sobic001G082800 Sobic002G390800--Sobic007G102000 Sobic009G125800 Sobic009G125800 Sobic002G390800--Sobic009G125800 Sobic008G047500 Sobic008G047500 Sobic002G390800--Sobic008G047500 Sobic002G390800--Sobic002G192900 Sobic009G136000 Sobic009G136000 Sobic002G390800--Sobic009G136000 Sobic002G390800--Sobic008G004900 Sobic002G390800--Sobic001G248400 Sobic010G038200 Sobic010G038200 Sobic002G390800--Sobic010G038200 Sobic008G004900--Sobic001G248400 Sobic008G004900--Sobic001G082800 Sobic009G131200 Sobic009G131200 Sobic008G004900--Sobic009G131200 Sobic008G004900--Sobic002G390800 Sobic008G004900--Sobic010G038200 Sobic008G004900--Sobic002G308000 Sobic002G271400 Sobic002G271400 Sobic008G004900--Sobic002G271400 Sobic002G113400 Sobic002G113400 Sobic008G004900--Sobic002G113400 Sobic008G004900--Sobic009G136000 Sobic002G192900--Sobic002G308000 Sobic010G188900 Sobic010G188900 Sobic002G192900--Sobic010G188900 Sobic006G095000 Sobic006G095000 Sobic002G192900--Sobic006G095000 Sobic001G361200 Sobic001G361200 Sobic002G192900--Sobic001G361200 Sobic002G192900--Sobic002G390800 Sobic003G184300 Sobic003G184300 Sobic002G192900--Sobic003G184300 Sobic004G064600 Sobic004G064600 Sobic002G192900--Sobic004G064600 Sobic001G323400 Sobic001G323400 Sobic002G192900--Sobic001G323400 Sobic002G192900--Sobic001G248400 Sobic010G018900--Sobic002G308000 Sobic010G257500 Sobic010G257500 Sobic010G018900--Sobic010G257500 Sobic004G007700 Sobic004G007700 Sobic010G018900--Sobic004G007700 Sobic002G066800 Sobic002G066800 Sobic010G018900--Sobic002G066800 Sobic010G038900 Sobic010G038900 Sobic010G018900--Sobic010G038900 Sobic010G018900--Sobic002G271400 Sobic010G018900--Sobic010G269800 Sobic009G063800 Sobic009G063800 Sobic010G018900--Sobic009G063800 Sobic006G272300 Sobic006G272300 Sobic010G018900--Sobic006G272300 Sobic007G151500 Sobic007G151500 Sobic009G042000--Sobic007G151500 Sobic009G042000--Sobic010G253200 Sobic009G042000--Sobic003G293400 Sobic009G042000--Sobic004G241300 Sobic002G201700 Sobic002G201700 Sobic009G042000--Sobic002G201700 Sobic008G156600 Sobic008G156600 Sobic009G042000--Sobic008G156600 Sobic009G042000--Sobic002G420100 Sobic009G025700 Sobic009G025700 Sobic009G042000--Sobic009G025700 Sobic009G042000--Sobic003G423700
Octagon: transcription factors


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