Gene annotation
Transcriptome id Sobic.001G138900.1,Sobic.001G138900.2
Synonym Sb01g012120
Functional annotation expressed protein
UniProt A0A1Z5S5L0 , A0A1B6QIX0
Pfam PF01878
Panther DB PTHR14087 PTHR14087:SF9
NCBI CDD KOG3383; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G14660 : -
RAP-DB (Rice) LOC_Os03g47260.1 : expressed protein
MaizeGDB (Corn) Zm00025a017121
Brachypodium KQK13802
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G138900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G091200 seven in absentia protein family domain containing protein, expressed -
2 Sobic.004G149400 ankyrin, putative, expressed -
3 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
4 Sobic.001G212600 a_IG002N01.7, putative, expressed -
5 Sobic.004G207000 fasciated ear2, putative, expressed -
6 Sobic.010G222800 expressed protein -
7 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
8 Sobic.006G106200 NAP domain containing protein, putative, expressed K11290: SET, TAF1, template-activating factor I
9 Sobic.004G327600 expressed protein -
10 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
11 Sobic.007G128100 expressed protein -
12 Sobic.003G240100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
14 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
15 Sobic.004G041100 ATEXO70G1, putative, expressed K07195: EXOC7, exocyst complex component 7
16 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
17 Sobic.008G078000 EDM2, putative, expressed -
18 Sobic.009G205400 RING-H2 finger protein ATL2M, putative, expressed -
19 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
20 Sobic.003G331000 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G138900 Sobic001G138900 Sobic003G091200 Sobic003G091200 Sobic001G138900--Sobic003G091200 Sobic004G149400 Sobic004G149400 Sobic001G138900--Sobic004G149400 Sobic005G062600 Sobic005G062600 Sobic001G138900--Sobic005G062600 Sobic001G212600 Sobic001G212600 Sobic001G138900--Sobic001G212600 Sobic004G207000 Sobic004G207000 Sobic001G138900--Sobic004G207000 Sobic010G222800 Sobic010G222800 Sobic001G138900--Sobic010G222800 Sobic005G160200 Sobic005G160200 Sobic001G138900--Sobic005G160200 Sobic006G106200 Sobic006G106200 Sobic001G138900--Sobic006G106200 Sobic004G327600 Sobic004G327600 Sobic001G138900--Sobic004G327600 Sobic002G196500 Sobic002G196500 Sobic003G091200--Sobic002G196500 Sobic005G162900 Sobic005G162900 Sobic003G091200--Sobic005G162900 Sobic003G091200--Sobic004G149400 Sobic001G137400 Sobic001G137400 Sobic003G091200--Sobic001G137400 Sobic001G171200 Sobic001G171200 Sobic003G091200--Sobic001G171200 Sobic009G243000 Sobic009G243000 Sobic003G091200--Sobic009G243000 Sobic003G022900 Sobic003G022900 Sobic003G091200--Sobic003G022900 Sobic004G220200 Sobic004G220200 Sobic003G091200--Sobic004G220200 Sobic001G457600 Sobic001G457600 Sobic003G091200--Sobic001G457600 Sobic004G149400--Sobic004G207000 Sobic004G149400--Sobic004G220200 Sobic004G149400--Sobic005G062600 Sobic009G216500 Sobic009G216500 Sobic004G149400--Sobic009G216500 Sobic004G149400--Sobic003G091200 Sobic008G070700 Sobic008G070700 Sobic004G149400--Sobic008G070700 Sobic004G149400--Sobic006G106200 Sobic004G149400--Sobic002G196500 Sobic004G149400--Sobic001G171200 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic010G092400 Sobic010G092400 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic003G351900 Sobic003G351900 Sobic001G212600--Sobic003G351900 Sobic003G411700 Sobic003G411700 Sobic001G212600--Sobic003G411700 Sobic008G165200 Sobic008G165200 Sobic001G212600--Sobic008G165200 Sobic001G369800 Sobic001G369800 Sobic001G212600--Sobic001G369800 Sobic001G296800 Sobic001G296800 Sobic001G212600--Sobic001G296800 Sobic001G212600--Sobic010G222800 Sobic001G487200 Sobic001G487200 Sobic001G212600--Sobic001G487200 Sobic001G212600--Sobic005G062600 Sobic002G006100 Sobic002G006100 Sobic001G212600--Sobic002G006100 Sobic006G022400 Sobic006G022400 Sobic004G207000--Sobic006G022400 Sobic001G540700 Sobic001G540700 Sobic004G207000--Sobic001G540700 Sobic007G125700 Sobic007G125700 Sobic004G207000--Sobic007G125700 Sobic009G006900 Sobic009G006900 Sobic004G207000--Sobic009G006900 Sobic002G302600 Sobic002G302600 Sobic004G207000--Sobic002G302600 Sobic004G207000--Sobic004G149400 Sobic005G032600 Sobic005G032600 Sobic004G207000--Sobic005G032600 Sobic010G149600 Sobic010G149600 Sobic004G207000--Sobic010G149600 Sobic009G031500 Sobic009G031500 Sobic004G207000--Sobic009G031500 Sobic003G343200 Sobic003G343200 Sobic010G222800--Sobic003G343200 Sobic010G024000 Sobic010G024000 Sobic010G222800--Sobic010G024000 Sobic010G222800--Sobic003G411700 Sobic002G112000 Sobic002G112000 Sobic010G222800--Sobic002G112000 Sobic010G222800--Sobic008G070700 Sobic002G271400 Sobic002G271400 Sobic010G222800--Sobic002G271400 Sobic007G076200 Sobic007G076200 Sobic010G222800--Sobic007G076200 Sobic003G423800 Sobic003G423800 Sobic010G222800--Sobic003G423800 Sobic008G131900 Sobic008G131900 Sobic010G222800--Sobic008G131900 Sobic004G014100 Sobic004G014100 Sobic005G160200--Sobic004G014100 Sobic005G160200--Sobic003G411700 Sobic005G160200--Sobic003G343200 Sobic006G091850 Sobic006G091850 Sobic005G160200--Sobic006G091850 Sobic002G315100 Sobic002G315100 Sobic005G160200--Sobic002G315100 Sobic010G038900 Sobic010G038900 Sobic005G160200--Sobic010G038900 Sobic010G257500 Sobic010G257500 Sobic005G160200--Sobic010G257500 Sobic001G534400 Sobic001G534400 Sobic005G160200--Sobic001G534400 Sobic004G350200 Sobic004G350200 Sobic005G160200--Sobic004G350200 Sobic001G211500 Sobic001G211500 Sobic006G106200--Sobic001G211500 Sobic006G106200--Sobic008G070700 Sobic006G106200--Sobic010G222800 Sobic003G072500 Sobic003G072500 Sobic006G106200--Sobic003G072500 Sobic003G289700 Sobic003G289700 Sobic006G106200--Sobic003G289700 Sobic006G106200--Sobic004G149400 Sobic001G005800 Sobic001G005800 Sobic006G106200--Sobic001G005800 Sobic006G106200--Sobic009G216500 Sobic006G106200--Sobic002G112000 Sobic001G105800 Sobic001G105800 Sobic004G327600--Sobic001G105800 Sobic002G289800 Sobic002G289800 Sobic004G327600--Sobic002G289800 Sobic002G128000 Sobic002G128000 Sobic004G327600--Sobic002G128000 Sobic003G085900 Sobic003G085900 Sobic004G327600--Sobic003G085900 Sobic004G327600--Sobic010G092400 Sobic001G289900 Sobic001G289900 Sobic004G327600--Sobic001G289900 Sobic004G075900 Sobic004G075900 Sobic004G327600--Sobic004G075900 Sobic004G327600--Sobic005G062600 Sobic003G444300 Sobic003G444300 Sobic004G327600--Sobic003G444300
Octagon: transcription factors


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