Gene annotation
Transcriptome id Sobic.009G232500.1
Synonym Sb09g028520
Functional annotation expressed protein
UniProt C5YVK1
Pfam PF10294
Panther DB PTHR14614 PTHR14614:SF7
NCBI CDD KOG2793; Putative N2,N2-dimethylguanosine tRNA methyltransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G44170 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os05g48950.1 : expressed protein
MaizeGDB (Corn) Zm00025a044571
Brachypodium PNT70700 , KQK04875
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G232500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
2 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3
3 Sobic.003G109200 expressed protein -
4 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
5 Sobic.006G181700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
6 Sobic.001G478700 THION26 - Plant thionin family protein precursor, expressed -
7 Sobic.007G010200 - -
8 Sobic.001G239100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
9 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
10 Sobic.004G229000 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
11 Sobic.004G146200 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K16904: dCTP diphosphatase
12 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
13 Sobic.009G187600 methyltransferase domain containing protein, expressed -
14 Sobic.010G079800 expressed protein -
15 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
16 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
17 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
18 Sobic.002G281400 protein of unknown function DUF1279 domain containing protein, expressed -
19 Sobic.006G162600 expressed protein -
20 Sobic.003G434000 expressed protein K06170: PSENEN, presenilin enhancer 2


Gene co-expression network
sample Sobic009G232500 Sobic009G232500 Sobic003G410200 Sobic003G410200 Sobic009G232500--Sobic003G410200 Sobic001G107300 Sobic001G107300 Sobic009G232500--Sobic001G107300 Sobic003G109200 Sobic003G109200 Sobic009G232500--Sobic003G109200 Sobic002G374200 Sobic002G374200 Sobic009G232500--Sobic002G374200 Sobic006G181700 Sobic006G181700 Sobic009G232500--Sobic006G181700 Sobic001G478700 Sobic001G478700 Sobic009G232500--Sobic001G478700 Sobic007G010200 Sobic007G010200 Sobic009G232500--Sobic007G010200 Sobic001G239100 Sobic001G239100 Sobic009G232500--Sobic001G239100 Sobic007G031100 Sobic007G031100 Sobic009G232500--Sobic007G031100 Sobic003G410200--Sobic009G232500 Sobic003G435000 Sobic003G435000 Sobic003G410200--Sobic003G435000 Sobic009G131500 Sobic009G131500 Sobic003G410200--Sobic009G131500 Sobic003G410200--Sobic007G031100 Sobic004G012800 Sobic004G012800 Sobic003G410200--Sobic004G012800 Sobic003G410200--Sobic002G374200 Sobic003G410200--Sobic007G010200 Sobic002G306600 Sobic002G306600 Sobic003G410200--Sobic002G306600 Sobic006G091850 Sobic006G091850 Sobic003G410200--Sobic006G091850 Sobic004G343600 Sobic004G343600 Sobic001G107300--Sobic004G343600 Sobic001G505000 Sobic001G505000 Sobic001G107300--Sobic001G505000 Sobic004G047500 Sobic004G047500 Sobic001G107300--Sobic004G047500 Sobic002G353500 Sobic002G353500 Sobic001G107300--Sobic002G353500 Sobic006G013900 Sobic006G013900 Sobic001G107300--Sobic006G013900 Sobic001G107300--Sobic003G109200 Sobic001G440900 Sobic001G440900 Sobic001G107300--Sobic001G440900 Sobic001G162800 Sobic001G162800 Sobic001G107300--Sobic001G162800 Sobic001G436300 Sobic001G436300 Sobic001G107300--Sobic001G436300 Sobic003G109200--Sobic001G107300 Sobic004G208100 Sobic004G208100 Sobic003G109200--Sobic004G208100 Sobic002G387800 Sobic002G387800 Sobic003G109200--Sobic002G387800 Sobic001G521100 Sobic001G521100 Sobic003G109200--Sobic001G521100 Sobic009G169200 Sobic009G169200 Sobic003G109200--Sobic009G169200 Sobic003G109200--Sobic009G232500 Sobic006G095300 Sobic006G095300 Sobic003G109200--Sobic006G095300 Sobic001G432100 Sobic001G432100 Sobic003G109200--Sobic001G432100 Sobic003G297200 Sobic003G297200 Sobic003G109200--Sobic003G297200 Sobic010G212700 Sobic010G212700 Sobic002G374200--Sobic010G212700 Sobic001G500500 Sobic001G500500 Sobic002G374200--Sobic001G500500 Sobic010G237800 Sobic010G237800 Sobic002G374200--Sobic010G237800 Sobic003G007200 Sobic003G007200 Sobic002G374200--Sobic003G007200 Sobic007G153700 Sobic007G153700 Sobic002G374200--Sobic007G153700 Sobic005G160200 Sobic005G160200 Sobic002G374200--Sobic005G160200 Sobic002G374200--Sobic009G232500 Sobic002G374200--Sobic003G410200 Sobic002G196500 Sobic002G196500 Sobic002G374200--Sobic002G196500 Sobic004G018200 Sobic004G018200 Sobic006G181700--Sobic004G018200 Sobic006G181700--Sobic009G232500 Sobic002G241500 Sobic002G241500 Sobic006G181700--Sobic002G241500 Sobic003G283300 Sobic003G283300 Sobic006G181700--Sobic003G283300 Sobic001G132900 Sobic001G132900 Sobic006G181700--Sobic001G132900 Sobic003G003000 Sobic003G003000 Sobic006G181700--Sobic003G003000 Sobic003G016400 Sobic003G016400 Sobic006G181700--Sobic003G016400 Sobic010G194200 Sobic010G194200 Sobic006G181700--Sobic010G194200 Sobic001G188700 Sobic001G188700 Sobic006G181700--Sobic001G188700 Sobic001G353501 Sobic001G353501 Sobic001G478700--Sobic001G353501 Sobic001G478700--Sobic009G232500 Sobic001G478700--Sobic003G410200 Sobic010G079800 Sobic010G079800 Sobic001G478700--Sobic010G079800 Sobic006G004300 Sobic006G004300 Sobic001G478700--Sobic006G004300 Sobic005G044100 Sobic005G044100 Sobic001G478700--Sobic005G044100 Sobic001G478700--Sobic007G031100 Sobic007G140500 Sobic007G140500 Sobic001G478700--Sobic007G140500 Sobic010G067200 Sobic010G067200 Sobic001G478700--Sobic010G067200 Sobic004G229000 Sobic004G229000 Sobic007G010200--Sobic004G229000 Sobic008G112100 Sobic008G112100 Sobic007G010200--Sobic008G112100 Sobic007G010200--Sobic007G031100 Sobic007G036800 Sobic007G036800 Sobic007G010200--Sobic007G036800 Sobic007G140100 Sobic007G140100 Sobic007G010200--Sobic007G140100 Sobic009G054400 Sobic009G054400 Sobic007G010200--Sobic009G054400 Sobic003G304800 Sobic003G304800 Sobic007G010200--Sobic003G304800 Sobic001G309200 Sobic001G309200 Sobic007G010200--Sobic001G309200 Sobic010G018900 Sobic010G018900 Sobic007G010200--Sobic010G018900 Sobic001G239100--Sobic007G153700 Sobic001G239100--Sobic010G079800 Sobic001G239100--Sobic002G196500 Sobic007G050300 Sobic007G050300 Sobic001G239100--Sobic007G050300 Sobic002G302600 Sobic002G302600 Sobic001G239100--Sobic002G302600 Sobic001G239100--Sobic009G232500 Sobic001G239100--Sobic002G374200 Sobic001G157600 Sobic001G157600 Sobic001G239100--Sobic001G157600 Sobic001G239100--Sobic001G440900 Sobic007G031100--Sobic007G010200 Sobic007G031100--Sobic001G432100 Sobic002G280900 Sobic002G280900 Sobic007G031100--Sobic002G280900 Sobic007G031100--Sobic003G410200 Sobic003G085500 Sobic003G085500 Sobic007G031100--Sobic003G085500 Sobic007G031100--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic007G031100--Sobic009G232500
Octagon: transcription factors


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