Gene annotation
Transcriptome id Sobic.010G079800.1
Synonym Sb10g006920
Functional annotation expressed protein
UniProt A0A194YIZ8
Pfam PF04504
Panther DB PTHR31662 PTHR31662:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66420 : DNA-binding storekeeper protein-related transcriptional regulator
RAP-DB (Rice) LOC_Os06g10710.1 : expressed protein
MaizeGDB (Corn) Zm00025a022243 , Zm00025a042503 , Zm00025a049598
Brachypodium KQK01724 , KQK19050 , PNT69560
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G079800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G239100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
2 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
4 Sobic.004G146200 MazG nucleotide pyrophosphohydrolase domain containing protein, expressed K16904: dCTP diphosphatase
5 Sobic.007G153700 transcription regulator, putative, expressed -
6 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
7 Sobic.001G478700 THION26 - Plant thionin family protein precursor, expressed -
8 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
9 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
10 Sobic.003G272300 RNA polymerase II transcriptional coactivator KELP, putative, expressed -
11 Sobic.006G276200 F-box domain containing protein, expressed -
12 Sobic.009G232500 expressed protein -
13 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G011800 SAM domain containing protein, putative, expressed -
15 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
16 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
17 Sobic.001G099800 nucleic acid binding protein, putative, expressed -
18 Sobic.003G058900 TATA-binding protein-associated factor 2N, putative, expressed K13098: TLS, RNA-binding protein FUS
19 Sobic.001G157600 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
20 Sobic.010G197800 expressed protein -


Gene co-expression network
sample Sobic010G079800 Sobic010G079800 Sobic001G239100 Sobic001G239100 Sobic010G079800--Sobic001G239100 Sobic007G050300 Sobic007G050300 Sobic010G079800--Sobic007G050300 Sobic001G136500 Sobic001G136500 Sobic010G079800--Sobic001G136500 Sobic004G146200 Sobic004G146200 Sobic010G079800--Sobic004G146200 Sobic007G153700 Sobic007G153700 Sobic010G079800--Sobic007G153700 Sobic007G031100 Sobic007G031100 Sobic010G079800--Sobic007G031100 Sobic001G478700 Sobic001G478700 Sobic010G079800--Sobic001G478700 Sobic004G206300 Sobic004G206300 Sobic010G079800--Sobic004G206300 Sobic001G188700 Sobic001G188700 Sobic010G079800--Sobic001G188700 Sobic001G239100--Sobic007G153700 Sobic001G239100--Sobic010G079800 Sobic002G196500 Sobic002G196500 Sobic001G239100--Sobic002G196500 Sobic001G239100--Sobic007G050300 Sobic002G302600 Sobic002G302600 Sobic001G239100--Sobic002G302600 Sobic009G232500 Sobic009G232500 Sobic001G239100--Sobic009G232500 Sobic002G374200 Sobic002G374200 Sobic001G239100--Sobic002G374200 Sobic001G157600 Sobic001G157600 Sobic001G239100--Sobic001G157600 Sobic001G440900 Sobic001G440900 Sobic001G239100--Sobic001G440900 Sobic006G051900 Sobic006G051900 Sobic007G050300--Sobic006G051900 Sobic006G120800 Sobic006G120800 Sobic007G050300--Sobic006G120800 Sobic010G197800 Sobic010G197800 Sobic007G050300--Sobic010G197800 Sobic002G095700 Sobic002G095700 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic007G050300--Sobic010G079800 Sobic001G038100 Sobic001G038100 Sobic007G050300--Sobic001G038100 Sobic003G253400 Sobic003G253400 Sobic007G050300--Sobic003G253400 Sobic007G117100 Sobic007G117100 Sobic007G050300--Sobic007G117100 Sobic001G132900 Sobic001G132900 Sobic001G136500--Sobic001G132900 Sobic001G099800 Sobic001G099800 Sobic001G136500--Sobic001G099800 Sobic009G056300 Sobic009G056300 Sobic001G136500--Sobic009G056300 Sobic008G008300 Sobic008G008300 Sobic001G136500--Sobic008G008300 Sobic001G136500--Sobic010G079800 Sobic006G276200 Sobic006G276200 Sobic001G136500--Sobic006G276200 Sobic001G136500--Sobic004G146200 Sobic008G125000 Sobic008G125000 Sobic001G136500--Sobic008G125000 Sobic001G136500--Sobic004G206300 Sobic004G146200--Sobic010G079800 Sobic004G146200--Sobic001G136500 Sobic004G146200--Sobic009G232500 Sobic004G146200--Sobic001G239100 Sobic004G146200--Sobic001G440900 Sobic001G033000 Sobic001G033000 Sobic004G146200--Sobic001G033000 Sobic004G146200--Sobic004G206300 Sobic004G146200--Sobic007G153700 Sobic004G146200--Sobic008G008300 Sobic007G153700--Sobic001G239100 Sobic001G468000 Sobic001G468000 Sobic007G153700--Sobic001G468000 Sobic009G006900 Sobic009G006900 Sobic007G153700--Sobic009G006900 Sobic007G153700--Sobic001G440900 Sobic003G274400 Sobic003G274400 Sobic007G153700--Sobic003G274400 Sobic010G237800 Sobic010G237800 Sobic007G153700--Sobic010G237800 Sobic004G129600 Sobic004G129600 Sobic007G153700--Sobic004G129600 Sobic007G153700--Sobic002G374200 Sobic007G153700--Sobic002G196500 Sobic007G010200 Sobic007G010200 Sobic007G031100--Sobic007G010200 Sobic001G432100 Sobic001G432100 Sobic007G031100--Sobic001G432100 Sobic002G280900 Sobic002G280900 Sobic007G031100--Sobic002G280900 Sobic003G410200 Sobic003G410200 Sobic007G031100--Sobic003G410200 Sobic003G085500 Sobic003G085500 Sobic007G031100--Sobic003G085500 Sobic007G031100--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic007G031100--Sobic002G422400 Sobic006G245700 Sobic006G245700 Sobic007G031100--Sobic006G245700 Sobic007G031100--Sobic009G232500 Sobic001G353501 Sobic001G353501 Sobic001G478700--Sobic001G353501 Sobic001G478700--Sobic009G232500 Sobic001G478700--Sobic003G410200 Sobic001G478700--Sobic010G079800 Sobic006G004300 Sobic006G004300 Sobic001G478700--Sobic006G004300 Sobic005G044100 Sobic005G044100 Sobic001G478700--Sobic005G044100 Sobic001G478700--Sobic007G031100 Sobic007G140500 Sobic007G140500 Sobic001G478700--Sobic007G140500 Sobic010G067200 Sobic010G067200 Sobic001G478700--Sobic010G067200 Sobic004G212700 Sobic004G212700 Sobic004G206300--Sobic004G212700 Sobic004G027000 Sobic004G027000 Sobic004G206300--Sobic004G027000 Sobic004G206300--Sobic009G056300 Sobic004G206300--Sobic004G129600 Sobic009G031500 Sobic009G031500 Sobic004G206300--Sobic009G031500 Sobic004G206300--Sobic008G125000 Sobic004G225300 Sobic004G225300 Sobic004G206300--Sobic004G225300 Sobic001G335500 Sobic001G335500 Sobic004G206300--Sobic001G335500 Sobic004G206300--Sobic001G099800 Sobic005G110526 Sobic005G110526 Sobic001G188700--Sobic005G110526 Sobic004G018200 Sobic004G018200 Sobic001G188700--Sobic004G018200 Sobic006G094500 Sobic006G094500 Sobic001G188700--Sobic006G094500 Sobic009G187600 Sobic009G187600 Sobic001G188700--Sobic009G187600 Sobic001G188700--Sobic007G031100 Sobic001G188700--Sobic008G125000 Sobic001G188700--Sobic001G132900 Sobic003G058900 Sobic003G058900 Sobic001G188700--Sobic003G058900 Sobic001G434400 Sobic001G434400 Sobic001G188700--Sobic001G434400
Octagon: transcription factors


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