Gene annotation
Transcriptome id Sobic.007G153700.1
Synonym Sb07g022740
Functional annotation transcription regulator, putative, expressed
UniProt A0A1B6PI54
Pfam PF04504
Panther DB PTHR31662 PTHR31662:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11510 : DNA-binding storekeeper protein-related transcriptional regulator
RAP-DB (Rice) LOC_Os09g27850.1 : transcription regulator, putative, expressed
MaizeGDB (Corn) Zm00025a030622
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G153700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G239100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
2 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
3 Sobic.009G006900 ZOS5-01 - C2H2 zinc finger protein, expressed -
4 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
5 Sobic.003G274400 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
6 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
7 Sobic.004G129600 expressed protein -
8 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
9 Sobic.002G196500 linker histone H1 and H5 family protein, expressed -
10 Sobic.010G079800 expressed protein -
11 Sobic.002G302600 OsFBX291 - F-box domain containing protein, expressed -
12 Sobic.005G032400 ASH-like SPRY domain containing protein, putative, expressed K14964: Set1/Ash2 histone methyltransferase complex subunit ASH2
13 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
14 Sobic.010G212700 tetraspanin family protein, putative, expressed -
15 Sobic.009G031500 agenet domain containing protein, putative, expressed -
16 Sobic.003G382100 PHD finger protein, putative, expressed -
17 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
18 Sobic.006G066400 cytochrome P450, putative, expressed K00517: indol-3-yl-methylglucosinolate hydroxylase
19 Sobic.009G026650 - -
20 Sobic.001G158300 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A


Gene co-expression network
sample Sobic007G153700 Sobic007G153700 Sobic001G239100 Sobic001G239100 Sobic007G153700--Sobic001G239100 Sobic001G468000 Sobic001G468000 Sobic007G153700--Sobic001G468000 Sobic009G006900 Sobic009G006900 Sobic007G153700--Sobic009G006900 Sobic001G440900 Sobic001G440900 Sobic007G153700--Sobic001G440900 Sobic003G274400 Sobic003G274400 Sobic007G153700--Sobic003G274400 Sobic010G237800 Sobic010G237800 Sobic007G153700--Sobic010G237800 Sobic004G129600 Sobic004G129600 Sobic007G153700--Sobic004G129600 Sobic002G374200 Sobic002G374200 Sobic007G153700--Sobic002G374200 Sobic002G196500 Sobic002G196500 Sobic007G153700--Sobic002G196500 Sobic001G239100--Sobic007G153700 Sobic010G079800 Sobic010G079800 Sobic001G239100--Sobic010G079800 Sobic001G239100--Sobic002G196500 Sobic007G050300 Sobic007G050300 Sobic001G239100--Sobic007G050300 Sobic002G302600 Sobic002G302600 Sobic001G239100--Sobic002G302600 Sobic009G232500 Sobic009G232500 Sobic001G239100--Sobic009G232500 Sobic001G239100--Sobic002G374200 Sobic001G157600 Sobic001G157600 Sobic001G239100--Sobic001G157600 Sobic001G239100--Sobic001G440900 Sobic006G066400 Sobic006G066400 Sobic001G468000--Sobic006G066400 Sobic010G212700 Sobic010G212700 Sobic001G468000--Sobic010G212700 Sobic006G272800 Sobic006G272800 Sobic001G468000--Sobic006G272800 Sobic001G468000--Sobic002G196500 Sobic002G284100 Sobic002G284100 Sobic001G468000--Sobic002G284100 Sobic001G158300 Sobic001G158300 Sobic001G468000--Sobic001G158300 Sobic010G180200 Sobic010G180200 Sobic001G468000--Sobic010G180200 Sobic001G468000--Sobic002G302600 Sobic001G171100 Sobic001G171100 Sobic001G468000--Sobic001G171100 Sobic004G207000 Sobic004G207000 Sobic009G006900--Sobic004G207000 Sobic010G149600 Sobic010G149600 Sobic009G006900--Sobic010G149600 Sobic009G006900--Sobic006G272800 Sobic002G430900 Sobic002G430900 Sobic009G006900--Sobic002G430900 Sobic009G006900--Sobic002G196500 Sobic005G062600 Sobic005G062600 Sobic009G006900--Sobic005G062600 Sobic009G006900--Sobic002G302600 Sobic002G017900 Sobic002G017900 Sobic009G006900--Sobic002G017900 Sobic001G540700 Sobic001G540700 Sobic009G006900--Sobic001G540700 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic010G001800 Sobic010G001800 Sobic001G440900--Sobic010G001800 Sobic001G289900 Sobic001G289900 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G235700 Sobic001G235700 Sobic001G440900--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic001G440900--Sobic001G107300 Sobic002G289800 Sobic002G289800 Sobic001G440900--Sobic002G289800 Sobic001G440900--Sobic007G153700 Sobic002G219900 Sobic002G219900 Sobic003G274400--Sobic002G219900 Sobic006G245700 Sobic006G245700 Sobic003G274400--Sobic006G245700 Sobic001G436300 Sobic001G436300 Sobic003G274400--Sobic001G436300 Sobic007G125700 Sobic007G125700 Sobic003G274400--Sobic007G125700 Sobic009G031500 Sobic009G031500 Sobic003G274400--Sobic009G031500 Sobic003G274400--Sobic004G129600 Sobic003G274400--Sobic002G430900 Sobic003G274400--Sobic002G017900 Sobic006G280100 Sobic006G280100 Sobic003G274400--Sobic006G280100 Sobic003G289700 Sobic003G289700 Sobic010G237800--Sobic003G289700 Sobic008G070700 Sobic008G070700 Sobic010G237800--Sobic008G070700 Sobic010G237800--Sobic001G158300 Sobic006G106200 Sobic006G106200 Sobic010G237800--Sobic006G106200 Sobic003G013800 Sobic003G013800 Sobic010G237800--Sobic003G013800 Sobic010G237800--Sobic002G374200 Sobic010G237800--Sobic010G212700 Sobic010G237800--Sobic007G153700 Sobic010G237800--Sobic002G196500 Sobic004G212700 Sobic004G212700 Sobic004G129600--Sobic004G212700 Sobic004G206300 Sobic004G206300 Sobic004G129600--Sobic004G206300 Sobic004G129600--Sobic003G274400 Sobic004G129600--Sobic009G031500 Sobic001G335500 Sobic001G335500 Sobic004G129600--Sobic001G335500 Sobic004G129600--Sobic007G125700 Sobic004G129600--Sobic007G153700 Sobic004G043750 Sobic004G043750 Sobic004G129600--Sobic004G043750 Sobic004G129600--Sobic002G017900 Sobic002G374200--Sobic010G212700 Sobic001G500500 Sobic001G500500 Sobic002G374200--Sobic001G500500 Sobic002G374200--Sobic010G237800 Sobic003G007200 Sobic003G007200 Sobic002G374200--Sobic003G007200 Sobic002G374200--Sobic007G153700 Sobic005G160200 Sobic005G160200 Sobic002G374200--Sobic005G160200 Sobic002G374200--Sobic009G232500 Sobic003G410200 Sobic003G410200 Sobic002G374200--Sobic003G410200 Sobic002G374200--Sobic002G196500 Sobic003G250100 Sobic003G250100 Sobic002G196500--Sobic003G250100 Sobic002G196500--Sobic001G468000 Sobic002G196500--Sobic006G272800 Sobic002G112000 Sobic002G112000 Sobic002G196500--Sobic002G112000 Sobic002G335500 Sobic002G335500 Sobic002G196500--Sobic002G335500 Sobic004G234600 Sobic004G234600 Sobic002G196500--Sobic004G234600 Sobic007G201900 Sobic007G201900 Sobic002G196500--Sobic007G201900 Sobic002G196500--Sobic001G171100 Sobic003G091200 Sobic003G091200 Sobic002G196500--Sobic003G091200
Octagon: transcription factors


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