Gene annotation
Transcriptome id Sobic.009G026650.1
Synonym -
Functional annotation -
UniProt A0A1Z5R0J6
Pfam -
Panther DB PTHR33448 PTHR33448:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37100 : protamine P1 family protein
RAP-DB (Rice) LOC_Os05g03440.1 : expressed protein
MaizeGDB (Corn) Zm00025a040733
Brachypodium KQK07856
Barley -
Wheat TraesCS1A02G065800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G468000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF677 domain containing protein, putative, expressed -
2 Sobic.001G101700 OsGIF1(Ortholog in rice:He et al. (2017))(PubMedID : 31659832)@GRF-interacting factor 1, putative, expressed -
3 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
4 Sobic.006G221300 expressed protein -
5 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
6 Sobic.003G345000 CAMK_CAMK_like.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
7 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.002G274500 LRP1, putative, expressed -
9 Sobic.004G162900 expressed protein -
10 Sobic.007G153700 transcription regulator, putative, expressed -
11 Sobic.007G201900 expressed protein -
12 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
13 Sobic.010G058700 expressed protein -
14 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
15 Sobic.010G086000 cyclin, putative, expressed K18810: cyclin D1/2/4, plant
16 Sobic.009G225700 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)
17 Sobic.009G087700 proline-rich family protein, putative, expressed -
18 Sobic.009G127800 BZIP protein, putative, expressed -
19 Sobic.001G158300 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
20 Sobic.001G335100 OsFBX125 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic009G026650 Sobic009G026650 Sobic001G468000 Sobic001G468000 Sobic009G026650--Sobic001G468000 Sobic001G101700 Sobic001G101700 Sobic009G026650--Sobic001G101700 Sobic006G272800 Sobic006G272800 Sobic009G026650--Sobic006G272800 Sobic006G221300 Sobic006G221300 Sobic009G026650--Sobic006G221300 Sobic009G225500 Sobic009G225500 Sobic009G026650--Sobic009G225500 Sobic003G345000 Sobic003G345000 Sobic009G026650--Sobic003G345000 Sobic002G279400 Sobic002G279400 Sobic009G026650--Sobic002G279400 Sobic002G274500 Sobic002G274500 Sobic009G026650--Sobic002G274500 Sobic004G162900 Sobic004G162900 Sobic009G026650--Sobic004G162900 Sobic006G066400 Sobic006G066400 Sobic001G468000--Sobic006G066400 Sobic010G212700 Sobic010G212700 Sobic001G468000--Sobic010G212700 Sobic001G468000--Sobic006G272800 Sobic002G196500 Sobic002G196500 Sobic001G468000--Sobic002G196500 Sobic002G284100 Sobic002G284100 Sobic001G468000--Sobic002G284100 Sobic001G158300 Sobic001G158300 Sobic001G468000--Sobic001G158300 Sobic010G180200 Sobic010G180200 Sobic001G468000--Sobic010G180200 Sobic002G302600 Sobic002G302600 Sobic001G468000--Sobic002G302600 Sobic001G171100 Sobic001G171100 Sobic001G468000--Sobic001G171100 Sobic006G221800 Sobic006G221800 Sobic001G101700--Sobic006G221800 Sobic010G255000 Sobic010G255000 Sobic001G101700--Sobic010G255000 Sobic004G003700 Sobic004G003700 Sobic001G101700--Sobic004G003700 Sobic007G147200 Sobic007G147200 Sobic001G101700--Sobic007G147200 Sobic007G201900 Sobic007G201900 Sobic001G101700--Sobic007G201900 Sobic007G209200 Sobic007G209200 Sobic001G101700--Sobic007G209200 Sobic008G151600 Sobic008G151600 Sobic001G101700--Sobic008G151600 Sobic009G057800 Sobic009G057800 Sobic001G101700--Sobic009G057800 Sobic001G143400 Sobic001G143400 Sobic001G101700--Sobic001G143400 Sobic006G272800--Sobic002G284100 Sobic002G027600 Sobic002G027600 Sobic006G272800--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic006G272800--Sobic004G267600 Sobic008G070700 Sobic008G070700 Sobic006G272800--Sobic008G070700 Sobic005G032600 Sobic005G032600 Sobic006G272800--Sobic005G032600 Sobic006G272800--Sobic001G468000 Sobic002G006100 Sobic002G006100 Sobic006G272800--Sobic002G006100 Sobic006G142500 Sobic006G142500 Sobic006G272800--Sobic006G142500 Sobic006G272800--Sobic001G158300 Sobic009G127800 Sobic009G127800 Sobic006G221300--Sobic009G127800 Sobic001G054700 Sobic001G054700 Sobic006G221300--Sobic001G054700 Sobic009G077300 Sobic009G077300 Sobic006G221300--Sobic009G077300 Sobic005G153000 Sobic005G153000 Sobic006G221300--Sobic005G153000 Sobic009G143200 Sobic009G143200 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic006G221300--Sobic004G052200 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic009G225500--Sobic009G127800 Sobic003G259300 Sobic003G259300 Sobic009G225500--Sobic003G259300 Sobic009G225500--Sobic006G142500 Sobic009G225500--Sobic006G221300 Sobic010G086000 Sobic010G086000 Sobic009G225500--Sobic010G086000 Sobic001G425700 Sobic001G425700 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic009G225500--Sobic006G272800 Sobic006G281900 Sobic006G281900 Sobic009G225500--Sobic006G281900 Sobic003G283600 Sobic003G283600 Sobic003G345000--Sobic003G283600 Sobic004G315700 Sobic004G315700 Sobic003G345000--Sobic004G315700 Sobic001G540700 Sobic001G540700 Sobic003G345000--Sobic001G540700 Sobic006G218900 Sobic006G218900 Sobic003G345000--Sobic006G218900 Sobic003G420300 Sobic003G420300 Sobic003G345000--Sobic003G420300 Sobic007G084200 Sobic007G084200 Sobic003G345000--Sobic007G084200 Sobic003G345000--Sobic009G225500 Sobic009G212100 Sobic009G212100 Sobic003G345000--Sobic009G212100 Sobic003G292700 Sobic003G292700 Sobic003G345000--Sobic003G292700 Sobic002G279400--Sobic007G201900 Sobic002G279400--Sobic009G057800 Sobic002G279400--Sobic009G127800 Sobic002G279400--Sobic006G221300 Sobic002G279400--Sobic005G153000 Sobic002G279400--Sobic001G101700 Sobic009G188500 Sobic009G188500 Sobic002G279400--Sobic009G188500 Sobic002G279400--Sobic001G054700 Sobic009G208300 Sobic009G208300 Sobic002G279400--Sobic009G208300 Sobic009G137500 Sobic009G137500 Sobic002G274500--Sobic009G137500 Sobic006G105600 Sobic006G105600 Sobic002G274500--Sobic006G105600 Sobic002G274500--Sobic004G052200 Sobic006G124400 Sobic006G124400 Sobic002G274500--Sobic006G124400 Sobic002G274500--Sobic009G208300 Sobic003G366000 Sobic003G366000 Sobic002G274500--Sobic003G366000 Sobic002G274500--Sobic004G162900 Sobic002G274500--Sobic009G188500 Sobic006G041700 Sobic006G041700 Sobic002G274500--Sobic006G041700 Sobic004G162900--Sobic006G221300 Sobic004G162900--Sobic002G279400 Sobic004G162900--Sobic007G201900 Sobic004G162900--Sobic001G054700 Sobic009G002200 Sobic009G002200 Sobic004G162900--Sobic009G002200 Sobic004G162900--Sobic009G077300 Sobic004G162900--Sobic009G127800 Sobic010G003300 Sobic010G003300 Sobic004G162900--Sobic010G003300 Sobic004G162900--Sobic005G153000
Octagon: transcription factors


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