Gene annotation
Transcriptome id Sobic.009G225700.1
Synonym GLT1, Sb09g027910
Functional annotation glutamate synthase, chloroplast precursor, putative, expressed
UniProt A0A1B6P9Z9
Pfam PF14691 PF07992 PF01493 PF04898 PF01645 PF00310
Panther DB PTHR11938 PTHR11938:SF109
NCBI CDD -
KEGG Orthology K00264; glutamate synthase (NADH)
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process GO:0015930glutamate synthase activity GO:0006807nitrogen compound metabolic process GO:0016638oxidoreductase activity, acting on the CH-NH2 group of donors GO:0006537glutamate biosynthetic process


Orthologs (automatic annotation)
TAIR AT5G53460 : NADH-dependent glutamate synthase 1
RAP-DB (Rice) LOC_Os05g48200.1 : glutamate synthase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a044495 , Zm00025a028023 , Zm00025a038839
Brachypodium KQK04984 , KQK09208
Barley HORVU3Hr1G063050.15 , HORVU3Hr1G063050.11 , HORVU3Hr1G063050.10 , HORVU3Hr1G063050.13 , HORVU3Hr1G063050.12 , HORVU3Hr1G063050.9 , HORVU3Hr1G063050.1 , HORVU3Hr1G063050.3 , HORVU3Hr1G063050.2 , HORVU3Hr1G063050.5 , HORVU3Hr1G063050.4 , HORVU3Hr1G063050.7 , HORVU3Hr1G063050.6
Wheat TraesCS3D02G266400 , TraesCS3D02G266400 , TraesCS3B02G299800 , TraesCS3A02G266300 , TraesCS3A02G266300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G233000 homeobox domain containing protein, expressed -
2 Sobic.005G153000 agenet domain containing protein, expressed -
3 Sobic.002G168000 expressed protein -
4 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
5 Sobic.004G282601 - -
6 Sobic.003G129500 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C
7 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
8 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
10 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
11 Sobic.008G175400 U-box domain-containing protein, putative, expressed -
12 Sobic.006G221300 expressed protein -
13 Sobic.010G037901 - -
14 Sobic.009G127800 BZIP protein, putative, expressed -
15 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
17 Sobic.002G021200 expressed protein K19001: HELLS, ATP-dependent DNA helicase
18 Sobic.008G052300 plant protein of unknown function DUF869 domain containing protein, expressed -
19 Sobic.009G077300 protein kinase, putative, expressed -
20 Sobic.005G036200 protein of unknown function containing protein, expressed -


Gene co-expression network
sample Sobic009G225700 Sobic009G225700 Sobic009G233000 Sobic009G233000 Sobic009G225700--Sobic009G233000 Sobic005G153000 Sobic005G153000 Sobic009G225700--Sobic005G153000 Sobic002G168000 Sobic002G168000 Sobic009G225700--Sobic002G168000 Sobic009G002200 Sobic009G002200 Sobic009G225700--Sobic009G002200 Sobic004G282601 Sobic004G282601 Sobic009G225700--Sobic004G282601 Sobic003G129500 Sobic003G129500 Sobic009G225700--Sobic003G129500 Sobic009G012600 Sobic009G012600 Sobic009G225700--Sobic009G012600 Sobic009G225500 Sobic009G225500 Sobic009G225700--Sobic009G225500 Sobic007G050800 Sobic007G050800 Sobic009G225700--Sobic007G050800 Sobic003G295600 Sobic003G295600 Sobic009G233000--Sobic003G295600 Sobic004G301800 Sobic004G301800 Sobic009G233000--Sobic004G301800 Sobic003G283700 Sobic003G283700 Sobic009G233000--Sobic003G283700 Sobic003G236200 Sobic003G236200 Sobic009G233000--Sobic003G236200 Sobic002G391100 Sobic002G391100 Sobic009G233000--Sobic002G391100 Sobic003G098800 Sobic003G098800 Sobic009G233000--Sobic003G098800 Sobic010G142900 Sobic010G142900 Sobic009G233000--Sobic010G142900 Sobic001G380800 Sobic001G380800 Sobic009G233000--Sobic001G380800 Sobic002G118300 Sobic002G118300 Sobic009G233000--Sobic002G118300 Sobic009G077300 Sobic009G077300 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic010G037901 Sobic010G037901 Sobic005G153000--Sobic010G037901 Sobic003G290400 Sobic003G290400 Sobic005G153000--Sobic003G290400 Sobic007G187700 Sobic007G187700 Sobic005G153000--Sobic007G187700 Sobic006G221300 Sobic006G221300 Sobic005G153000--Sobic006G221300 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600 Sobic002G168000--Sobic007G187700 Sobic002G168000--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic002G168000--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic002G168000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic002G168000--Sobic006G275500 Sobic009G188900 Sobic009G188900 Sobic002G168000--Sobic009G188900 Sobic002G168000--Sobic009G077300 Sobic006G016700 Sobic006G016700 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic009G002200--Sobic007G050800 Sobic009G002200--Sobic003G290400 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic009G002200--Sobic010G037901 Sobic004G282601--Sobic005G153000 Sobic004G282601--Sobic001G104500 Sobic004G282601--Sobic010G037901 Sobic004G282601--Sobic009G077300 Sobic004G282601--Sobic009G002200 Sobic004G282601--Sobic007G187700 Sobic004G282601--Sobic003G290400 Sobic004G282601--Sobic006G221300 Sobic004G282601--Sobic005G196600 Sobic003G129500--Sobic005G153000 Sobic002G112000 Sobic002G112000 Sobic003G129500--Sobic002G112000 Sobic003G129500--Sobic002G168000 Sobic009G012400 Sobic009G012400 Sobic003G129500--Sobic009G012400 Sobic010G250400 Sobic010G250400 Sobic003G129500--Sobic010G250400 Sobic003G423800 Sobic003G423800 Sobic003G129500--Sobic003G423800 Sobic003G370300 Sobic003G370300 Sobic003G129500--Sobic003G370300 Sobic010G222800 Sobic010G222800 Sobic003G129500--Sobic010G222800 Sobic003G183466 Sobic003G183466 Sobic003G129500--Sobic003G183466 Sobic009G012600--Sobic007G050800 Sobic005G045700 Sobic005G045700 Sobic009G012600--Sobic005G045700 Sobic006G226000 Sobic006G226000 Sobic009G012600--Sobic006G226000 Sobic007G192200 Sobic007G192200 Sobic009G012600--Sobic007G192200 Sobic009G012600--Sobic009G002200 Sobic009G012600--Sobic005G036200 Sobic009G012600--Sobic010G037901 Sobic006G262501 Sobic006G262501 Sobic009G012600--Sobic006G262501 Sobic008G191850 Sobic008G191850 Sobic009G012600--Sobic008G191850 Sobic009G127800 Sobic009G127800 Sobic009G225500--Sobic009G127800 Sobic003G259300 Sobic003G259300 Sobic009G225500--Sobic003G259300 Sobic006G142500 Sobic006G142500 Sobic009G225500--Sobic006G142500 Sobic009G225500--Sobic006G221300 Sobic010G086000 Sobic010G086000 Sobic009G225500--Sobic010G086000 Sobic001G425700 Sobic001G425700 Sobic009G225500--Sobic001G425700 Sobic004G179800 Sobic004G179800 Sobic009G225500--Sobic004G179800 Sobic006G272800 Sobic006G272800 Sobic009G225500--Sobic006G272800 Sobic009G225500--Sobic006G281900 Sobic007G050800--Sobic009G002200 Sobic007G050800--Sobic006G016700 Sobic008G118100 Sobic008G118100 Sobic007G050800--Sobic008G118100 Sobic007G050800--Sobic006G226000 Sobic007G050800--Sobic002G168000 Sobic007G050800--Sobic005G153000 Sobic007G050800--Sobic006G135800 Sobic007G050800--Sobic007G187700 Sobic007G050800--Sobic009G012600
Octagon: transcription factors


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