Gene annotation
Transcriptome id Sobic.002G274500.1
Synonym STY1, SRS1
Functional annotation LRP1, putative, expressed
UniProt A0A1B6QDR9
Pfam PF05142
Panther DB PTHR31604 PTHR31604:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G51060 : Lateral root primordium (LRP) protein-related
RAP-DB (Rice) LOC_Os09g36160.1 : LRP1, putative, expressed
MaizeGDB (Corn) Zm00025a047778 , Zm00025a005706 , Zm00025a039107 , Zm00025a034204 , Zm00025a014427
Brachypodium KQK11604 , PNT73613 , KQJ91165 , KQJ99272
Barley HORVU7Hr1G057230.2 , HORVU7Hr1G057230.3 , HORVU7Hr1G057230.1 , HORVU5Hr1G081450.3 , HORVU5Hr1G081450.2 , HORVU5Hr1G081450.1 , HORVU5Hr1G081450.7 , HORVU5Hr1G081450.6 , HORVU5Hr1G081450.5 , HORVU5Hr1G081450.4 , HORVU3Hr1G108950.10 , HORVU3Hr1G108950.11 , HORVU3Hr1G108950.4 , HORVU3Hr1G108950.5 , HORVU3Hr1G108950.6 , HORVU3Hr1G108950.7 , HORVU3Hr1G108950.1 , HORVU3Hr1G108950.2 , HORVU3Hr1G108950.3
Wheat TraesCS3D02G497300 , TraesCS3B02G552400 , TraesCS7B02G306300 , TraesCS7B02G169200 , TraesCS3A02G491500 , TraesCS5D02G325400 , TraesCS7A02G270900 , TraesCS7D02G271400 , TraesCS5B02G319600 , TraesCS5D02G325400 , TraesCS5A02G319200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G137500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
3 Sobic.004G052200 expressed protein -
4 Sobic.006G124400 ATP binding protein, putative, expressed -
5 Sobic.009G208300 TOO MANY MOUTHS precursor, putative, expressed -
6 Sobic.003G366000 DUF623 domain containing protein, expressed -
7 Sobic.004G162900 expressed protein -
8 Sobic.009G188500 expressed protein -
9 Sobic.006G041700 sex determination protein tasselseed-2, putative, expressed -
10 Sobic.010G058700 expressed protein -
11 Sobic.006G197400 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
13 Sobic.009G026650 - -
14 Sobic.002G286700 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
15 Sobic.002G265200 formin, putative, expressed -
16 Sobic.006G187000 leucine-rich repeat family protein, putative, expressed -
17 Sobic.006G221300 expressed protein -
18 Sobic.001G160000 LSTK-1-like kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
19 Sobic.001G496400 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
20 Sobic.010G227200 expressed protein -


Gene co-expression network
sample Sobic002G274500 Sobic002G274500 Sobic009G137500 Sobic009G137500 Sobic002G274500--Sobic009G137500 Sobic006G105600 Sobic006G105600 Sobic002G274500--Sobic006G105600 Sobic004G052200 Sobic004G052200 Sobic002G274500--Sobic004G052200 Sobic006G124400 Sobic006G124400 Sobic002G274500--Sobic006G124400 Sobic009G208300 Sobic009G208300 Sobic002G274500--Sobic009G208300 Sobic003G366000 Sobic003G366000 Sobic002G274500--Sobic003G366000 Sobic004G162900 Sobic004G162900 Sobic002G274500--Sobic004G162900 Sobic009G188500 Sobic009G188500 Sobic002G274500--Sobic009G188500 Sobic006G041700 Sobic006G041700 Sobic002G274500--Sobic006G041700 Sobic006G187000 Sobic006G187000 Sobic009G137500--Sobic006G187000 Sobic001G267100 Sobic001G267100 Sobic009G137500--Sobic001G267100 Sobic009G137500--Sobic006G105600 Sobic006G255300 Sobic006G255300 Sobic009G137500--Sobic006G255300 Sobic009G137500--Sobic003G366000 Sobic003G016200 Sobic003G016200 Sobic009G137500--Sobic003G016200 Sobic001G276800 Sobic001G276800 Sobic009G137500--Sobic001G276800 Sobic008G150500 Sobic008G150500 Sobic009G137500--Sobic008G150500 Sobic001G046400 Sobic001G046400 Sobic009G137500--Sobic001G046400 Sobic005G091000 Sobic005G091000 Sobic006G105600--Sobic005G091000 Sobic006G105600--Sobic001G267100 Sobic006G105600--Sobic006G124400 Sobic002G296000 Sobic002G296000 Sobic006G105600--Sobic002G296000 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic008G083500 Sobic008G083500 Sobic006G105600--Sobic008G083500 Sobic001G304800 Sobic001G304800 Sobic006G105600--Sobic001G304800 Sobic006G221300 Sobic006G221300 Sobic004G052200--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G052200--Sobic009G143200 Sobic009G077300 Sobic009G077300 Sobic004G052200--Sobic009G077300 Sobic001G054700 Sobic001G054700 Sobic004G052200--Sobic001G054700 Sobic004G052200--Sobic006G124400 Sobic007G218100 Sobic007G218100 Sobic004G052200--Sobic007G218100 Sobic006G275500 Sobic006G275500 Sobic004G052200--Sobic006G275500 Sobic001G104500 Sobic001G104500 Sobic004G052200--Sobic001G104500 Sobic002G230800 Sobic002G230800 Sobic004G052200--Sobic002G230800 Sobic006G124400--Sobic002G296000 Sobic010G105400 Sobic010G105400 Sobic006G124400--Sobic010G105400 Sobic009G101100 Sobic009G101100 Sobic006G124400--Sobic009G101100 Sobic007G027900 Sobic007G027900 Sobic006G124400--Sobic007G027900 Sobic004G273000 Sobic004G273000 Sobic006G124400--Sobic004G273000 Sobic005G005700 Sobic005G005700 Sobic006G124400--Sobic005G005700 Sobic008G006800 Sobic008G006800 Sobic006G124400--Sobic008G006800 Sobic001G477400 Sobic001G477400 Sobic006G124400--Sobic001G477400 Sobic001G398400 Sobic001G398400 Sobic006G124400--Sobic001G398400 Sobic009G060800 Sobic009G060800 Sobic009G208300--Sobic009G060800 Sobic010G192500 Sobic010G192500 Sobic009G208300--Sobic010G192500 Sobic007G209200 Sobic007G209200 Sobic009G208300--Sobic007G209200 Sobic009G208300--Sobic003G366000 Sobic001G473500 Sobic001G473500 Sobic009G208300--Sobic001G473500 Sobic001G390400 Sobic001G390400 Sobic009G208300--Sobic001G390400 Sobic001G286700 Sobic001G286700 Sobic009G208300--Sobic001G286700 Sobic009G208300--Sobic009G188500 Sobic009G208300--Sobic001G046400 Sobic006G110850 Sobic006G110850 Sobic003G366000--Sobic006G110850 Sobic003G366000--Sobic006G187000 Sobic003G366000--Sobic009G060800 Sobic004G302700 Sobic004G302700 Sobic003G366000--Sobic004G302700 Sobic003G366000--Sobic010G192500 Sobic003G366000--Sobic001G390400 Sobic001G160000 Sobic001G160000 Sobic003G366000--Sobic001G160000 Sobic003G366000--Sobic001G046400 Sobic008G190000 Sobic008G190000 Sobic003G366000--Sobic008G190000 Sobic004G162900--Sobic006G221300 Sobic002G279400 Sobic002G279400 Sobic004G162900--Sobic002G279400 Sobic007G201900 Sobic007G201900 Sobic004G162900--Sobic007G201900 Sobic004G162900--Sobic001G054700 Sobic009G002200 Sobic009G002200 Sobic004G162900--Sobic009G002200 Sobic004G162900--Sobic009G077300 Sobic009G127800 Sobic009G127800 Sobic004G162900--Sobic009G127800 Sobic010G003300 Sobic010G003300 Sobic004G162900--Sobic010G003300 Sobic005G153000 Sobic005G153000 Sobic004G162900--Sobic005G153000 Sobic010G037901 Sobic010G037901 Sobic009G188500--Sobic010G037901 Sobic003G086800 Sobic003G086800 Sobic009G188500--Sobic003G086800 Sobic009G188500--Sobic009G208300 Sobic009G188500--Sobic005G153000 Sobic009G188500--Sobic002G279400 Sobic002G144600 Sobic002G144600 Sobic009G188500--Sobic002G144600 Sobic006G197400 Sobic006G197400 Sobic009G188500--Sobic006G197400 Sobic009G188500--Sobic009G077300 Sobic009G188500--Sobic006G041700 Sobic001G493100 Sobic001G493100 Sobic006G041700--Sobic001G493100 Sobic006G172000 Sobic006G172000 Sobic006G041700--Sobic006G172000 Sobic006G041700--Sobic006G197400 Sobic006G041700--Sobic003G086800 Sobic001G246600 Sobic001G246600 Sobic006G041700--Sobic001G246600 Sobic002G175200 Sobic002G175200 Sobic006G041700--Sobic002G175200 Sobic004G330200 Sobic004G330200 Sobic006G041700--Sobic004G330200 Sobic003G350400 Sobic003G350400 Sobic006G041700--Sobic003G350400 Sobic002G259200 Sobic002G259200 Sobic006G041700--Sobic002G259200
Octagon: transcription factors


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