Gene annotation
| Transcriptome id | Sobic.009G137500.1 |
|---|---|
| Synonym | GSTU8, Sb09g020350, ATGSTU8 |
| Functional annotation | glutathione S-transferase, putative, expressed |
| UniProt | C5YXU8 |
| Pfam | PF13410 PF13417 |
| Panther DB | PTHR11260 PTHR11260:SF312 |
| NCBI CDD | KOG0406; Glutathione S-transferase |
| KEGG Orthology | K00799; GST, glutathione S-transferase |
| Gene Ontology | GO:0005515; protein binding |
Orthologs (automatic annotation)
| TAIR | AT3G09270 : glutathione S-transferase TAU 8 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g34150.1 : glutathione S-transferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a043702 |
| Brachypodium | KQK06261 , KQK11525 |
| Barley | HORVU1Hr1G064890.6 , HORVU1Hr1G064890.7 , HORVU1Hr1G064890.4 , HORVU1Hr1G064890.5 , HORVU1Hr1G064890.2 , HORVU1Hr1G064890.1 |
| Wheat | TraesCS3B02G539800 , TraesCS1D02G257800 , TraesCS3D02G485700 , TraesCS1B02G269100 , TraesCS3B02G540700 , TraesCS1A02G258500 |
| Populus | - |
JBrowse
| Sobic.009G137500 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G187000 | leucine-rich repeat family protein, putative, expressed | - |
| 2 | Sobic.001G267100 | "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 3 | Sobic.006G105600 | "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed | K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1 |
| 4 | Sobic.006G255300 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed | K14486: K14486, auxin response factor |
| 5 | Sobic.003G366000 | DUF623 domain containing protein, expressed | - |
| 6 | Sobic.003G016200 | expressed protein | - |
| 7 | Sobic.001G276800 | peptide transporter PTR2, putative, expressed | K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 8 | Sobic.008G150500 | - | - |
| 9 | Sobic.001G046400 | expressed protein | - |
| 10 | Sobic.001G160000 | LSTK-1-like kinase, putative, expressed | K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5 |
| 11 | Sobic.003G283900 | leucine-rich repeat family protein, putative, expressed | - |
| 12 | Sobic.010G241100 | thaumatin family domain containing protein, expressed | - |
| 13 | Sobic.006G125200 | ubiquitin family protein, putative, expressed | - |
| 14 | Sobic.001G064600 | IQ calmodulin-binding motif domain containing protein, expressed | - |
| 15 | Sobic.004G302700 | YABBY domain containing protein, putative, expressed | - |
| 16 | Sobic.005G091000 | receptor protein kinase CLAVATA1 precursor, putative, expressed | - |
| 17 | Sobic.010G058700 | expressed protein | - |
| 18 | Sobic.010G192500 | anthranilate phosphoribosyltransferase, putative, expressed | - |
| 19 | Sobic.009G060800 | carboxyl-terminal proteinase, putative, expressed | - |
| 20 | Sobic.002G337600 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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