Gene annotation
Transcriptome id Sobic.004G162900.1
Synonym Sb04g021450
Functional annotation expressed protein
UniProt A0A1Z5RMT1
Pfam -
Panther DB PTHR34460 PTHR34460:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49100 : -
RAP-DB (Rice) LOC_Os02g32550.1 : expressed protein
MaizeGDB (Corn) Zm00025a011573 , Zm00025a020517
Brachypodium KQJ99682 , KQJ82436
Barley HORVU2Hr1G072060.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G221300 expressed protein -
2 Sobic.002G279400 DUF630/DUF632 domains containing protein, putative, expressed -
3 Sobic.007G201900 expressed protein -
4 Sobic.001G054700 seed specific protein Bn15D14A, putative, expressed -
5 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -
6 Sobic.009G077300 protein kinase, putative, expressed -
7 Sobic.009G127800 BZIP protein, putative, expressed -
8 Sobic.010G003300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
9 Sobic.005G153000 agenet domain containing protein, expressed -
10 Sobic.005G157300 protein binding protein, putative, expressed -
11 Sobic.003G290400 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
12 Sobic.004G282601 - -
13 Sobic.009G143200 DUF630/DUF632 domains containing protein, putative, expressed -
14 Sobic.007G050800 abhydrolase domain-containing protein FAM108C1, putative, expressed -
15 Sobic.003G259300 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
16 Sobic.009G225500 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
17 Sobic.004G052200 expressed protein -
18 Sobic.006G272800 Most C2 domain protein(PubMedID : 29491869)@anthranilate phosphoribosyltransferase, putative, expressed -
19 Sobic.003G244000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
20 Sobic.002G027600 receptor protein kinase CLAVATA1 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G162900 Sobic004G162900 Sobic006G221300 Sobic006G221300 Sobic004G162900--Sobic006G221300 Sobic002G279400 Sobic002G279400 Sobic004G162900--Sobic002G279400 Sobic007G201900 Sobic007G201900 Sobic004G162900--Sobic007G201900 Sobic001G054700 Sobic001G054700 Sobic004G162900--Sobic001G054700 Sobic009G002200 Sobic009G002200 Sobic004G162900--Sobic009G002200 Sobic009G077300 Sobic009G077300 Sobic004G162900--Sobic009G077300 Sobic009G127800 Sobic009G127800 Sobic004G162900--Sobic009G127800 Sobic010G003300 Sobic010G003300 Sobic004G162900--Sobic010G003300 Sobic005G153000 Sobic005G153000 Sobic004G162900--Sobic005G153000 Sobic006G221300--Sobic009G127800 Sobic006G221300--Sobic001G054700 Sobic006G221300--Sobic009G077300 Sobic006G221300--Sobic005G153000 Sobic009G143200 Sobic009G143200 Sobic006G221300--Sobic009G143200 Sobic004G108400 Sobic004G108400 Sobic006G221300--Sobic004G108400 Sobic004G052200 Sobic004G052200 Sobic006G221300--Sobic004G052200 Sobic009G225500 Sobic009G225500 Sobic006G221300--Sobic009G225500 Sobic008G052300 Sobic008G052300 Sobic006G221300--Sobic008G052300 Sobic002G279400--Sobic007G201900 Sobic009G057800 Sobic009G057800 Sobic002G279400--Sobic009G057800 Sobic002G279400--Sobic009G127800 Sobic002G279400--Sobic006G221300 Sobic002G279400--Sobic005G153000 Sobic001G101700 Sobic001G101700 Sobic002G279400--Sobic001G101700 Sobic009G188500 Sobic009G188500 Sobic002G279400--Sobic009G188500 Sobic002G279400--Sobic001G054700 Sobic009G208300 Sobic009G208300 Sobic002G279400--Sobic009G208300 Sobic007G201900--Sobic009G057800 Sobic007G201900--Sobic001G101700 Sobic010G255000 Sobic010G255000 Sobic007G201900--Sobic010G255000 Sobic002G112000 Sobic002G112000 Sobic007G201900--Sobic002G112000 Sobic007G201900--Sobic002G279400 Sobic001G101900 Sobic001G101900 Sobic007G201900--Sobic001G101900 Sobic003G244000 Sobic003G244000 Sobic007G201900--Sobic003G244000 Sobic007G201900--Sobic009G143200 Sobic007G147200 Sobic007G147200 Sobic007G201900--Sobic007G147200 Sobic001G054700--Sobic006G221300 Sobic001G054700--Sobic009G077300 Sobic001G054700--Sobic004G108400 Sobic001G054700--Sobic009G143200 Sobic002G050700 Sobic002G050700 Sobic001G054700--Sobic002G050700 Sobic006G124400 Sobic006G124400 Sobic001G054700--Sobic006G124400 Sobic001G054700--Sobic009G127800 Sobic001G054700--Sobic005G153000 Sobic006G221800 Sobic006G221800 Sobic001G054700--Sobic006G221800 Sobic007G050800 Sobic007G050800 Sobic009G002200--Sobic007G050800 Sobic003G290400 Sobic003G290400 Sobic009G002200--Sobic003G290400 Sobic004G282601 Sobic004G282601 Sobic009G002200--Sobic004G282601 Sobic006G135800 Sobic006G135800 Sobic009G002200--Sobic006G135800 Sobic005G036200 Sobic005G036200 Sobic009G002200--Sobic005G036200 Sobic009G002200--Sobic005G153000 Sobic001G375800 Sobic001G375800 Sobic009G002200--Sobic001G375800 Sobic004G078500 Sobic004G078500 Sobic009G002200--Sobic004G078500 Sobic010G037901 Sobic010G037901 Sobic009G002200--Sobic010G037901 Sobic009G077300--Sobic005G153000 Sobic009G077300--Sobic006G221300 Sobic009G077300--Sobic001G054700 Sobic005G163400 Sobic005G163400 Sobic009G077300--Sobic005G163400 Sobic002G168000 Sobic002G168000 Sobic009G077300--Sobic002G168000 Sobic009G077300--Sobic002G050700 Sobic009G077300--Sobic004G282601 Sobic009G077300--Sobic009G143200 Sobic007G187700 Sobic007G187700 Sobic009G077300--Sobic007G187700 Sobic009G127800--Sobic006G221300 Sobic009G127800--Sobic009G225500 Sobic009G127800--Sobic001G054700 Sobic006G142500 Sobic006G142500 Sobic009G127800--Sobic006G142500 Sobic009G127800--Sobic008G052300 Sobic009G127800--Sobic002G279400 Sobic007G162400 Sobic007G162400 Sobic009G127800--Sobic007G162400 Sobic002G027600 Sobic002G027600 Sobic009G127800--Sobic002G027600 Sobic005G157300 Sobic005G157300 Sobic009G127800--Sobic005G157300 Sobic010G003300--Sobic001G054700 Sobic003G283600 Sobic003G283600 Sobic010G003300--Sobic003G283600 Sobic010G003300--Sobic006G221300 Sobic009G172950 Sobic009G172950 Sobic010G003300--Sobic009G172950 Sobic002G284100 Sobic002G284100 Sobic010G003300--Sobic002G284100 Sobic010G003300--Sobic009G127800 Sobic010G003300--Sobic006G142500 Sobic001G158300 Sobic001G158300 Sobic010G003300--Sobic001G158300 Sobic009G101100 Sobic009G101100 Sobic010G003300--Sobic009G101100 Sobic005G153000--Sobic009G077300 Sobic005G153000--Sobic002G168000 Sobic005G153000--Sobic004G282601 Sobic005G153000--Sobic010G037901 Sobic005G153000--Sobic003G290400 Sobic005G153000--Sobic007G187700 Sobic005G153000--Sobic006G221300 Sobic003G129500 Sobic003G129500 Sobic005G153000--Sobic003G129500 Sobic005G196600 Sobic005G196600 Sobic005G153000--Sobic005G196600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.