Gene annotation
Transcriptome id Sobic.004G146200.2,Sobic.004G146200.4,Sobic.004G146200.3
Synonym Sb04g019220
Functional annotation MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
UniProt A0A1Z5RMF9 , C5XRR0
Pfam PF03819
Panther DB PTHR14552 PTHR14552:SF17
NCBI CDD -
KEGG Orthology K16904; dCTP diphosphatase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25400 : -
RAP-DB (Rice) LOC_Os02g27810.1 : MazG nucleotide pyrophosphohydrolase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a020336
Brachypodium -
Barley HORVU2Hr1G066970.1 , HORVU2Hr1G066970.4 , HORVU2Hr1G066970.5 , HORVU2Hr1G066970.6
Wheat TraesCS2B02G292300 , TraesCS2A02G274400 , TraesCS2D02G273900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G079800 expressed protein -
2 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
3 Sobic.009G232500 expressed protein -
4 Sobic.001G239100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
5 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
6 Sobic.001G033000 ribosomal RNA large subunit methyltransferase J, putative, expressed -
7 Sobic.004G206300 pre-mRNA-splicing factor ISY1, putative, expressed K12870: pre-mRNA-splicing factor ISY1
8 Sobic.007G153700 transcription regulator, putative, expressed -
9 Sobic.008G008300 expressed protein -
10 Sobic.001G132900 expressed protein -
11 Sobic.008G107900 glycine-rich protein, putative, expressed -
12 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3
13 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
14 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
15 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
16 Sobic.009G231900 expressed protein -
17 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
18 Sobic.006G181700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
19 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
20 Sobic.004G212700 RNA recognition motif containing protein, putative, expressed K12883: NCBP2, nuclear cap-binding protein subunit 2


Gene co-expression network
sample Sobic004G146200 Sobic004G146200 Sobic010G079800 Sobic010G079800 Sobic004G146200--Sobic010G079800 Sobic001G136500 Sobic001G136500 Sobic004G146200--Sobic001G136500 Sobic009G232500 Sobic009G232500 Sobic004G146200--Sobic009G232500 Sobic001G239100 Sobic001G239100 Sobic004G146200--Sobic001G239100 Sobic001G440900 Sobic001G440900 Sobic004G146200--Sobic001G440900 Sobic001G033000 Sobic001G033000 Sobic004G146200--Sobic001G033000 Sobic004G206300 Sobic004G206300 Sobic004G146200--Sobic004G206300 Sobic007G153700 Sobic007G153700 Sobic004G146200--Sobic007G153700 Sobic008G008300 Sobic008G008300 Sobic004G146200--Sobic008G008300 Sobic010G079800--Sobic001G239100 Sobic007G050300 Sobic007G050300 Sobic010G079800--Sobic007G050300 Sobic010G079800--Sobic001G136500 Sobic010G079800--Sobic004G146200 Sobic010G079800--Sobic007G153700 Sobic007G031100 Sobic007G031100 Sobic010G079800--Sobic007G031100 Sobic001G478700 Sobic001G478700 Sobic010G079800--Sobic001G478700 Sobic010G079800--Sobic004G206300 Sobic001G188700 Sobic001G188700 Sobic010G079800--Sobic001G188700 Sobic001G132900 Sobic001G132900 Sobic001G136500--Sobic001G132900 Sobic001G099800 Sobic001G099800 Sobic001G136500--Sobic001G099800 Sobic009G056300 Sobic009G056300 Sobic001G136500--Sobic009G056300 Sobic001G136500--Sobic008G008300 Sobic001G136500--Sobic010G079800 Sobic006G276200 Sobic006G276200 Sobic001G136500--Sobic006G276200 Sobic001G136500--Sobic004G146200 Sobic008G125000 Sobic008G125000 Sobic001G136500--Sobic008G125000 Sobic001G136500--Sobic004G206300 Sobic003G410200 Sobic003G410200 Sobic009G232500--Sobic003G410200 Sobic001G107300 Sobic001G107300 Sobic009G232500--Sobic001G107300 Sobic003G109200 Sobic003G109200 Sobic009G232500--Sobic003G109200 Sobic002G374200 Sobic002G374200 Sobic009G232500--Sobic002G374200 Sobic006G181700 Sobic006G181700 Sobic009G232500--Sobic006G181700 Sobic009G232500--Sobic001G478700 Sobic007G010200 Sobic007G010200 Sobic009G232500--Sobic007G010200 Sobic009G232500--Sobic001G239100 Sobic009G232500--Sobic007G031100 Sobic001G239100--Sobic007G153700 Sobic001G239100--Sobic010G079800 Sobic002G196500 Sobic002G196500 Sobic001G239100--Sobic002G196500 Sobic001G239100--Sobic007G050300 Sobic002G302600 Sobic002G302600 Sobic001G239100--Sobic002G302600 Sobic001G239100--Sobic009G232500 Sobic001G239100--Sobic002G374200 Sobic001G157600 Sobic001G157600 Sobic001G239100--Sobic001G157600 Sobic001G239100--Sobic001G440900 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic010G001800 Sobic010G001800 Sobic001G440900--Sobic010G001800 Sobic001G289900 Sobic001G289900 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G235700 Sobic001G235700 Sobic001G440900--Sobic001G235700 Sobic001G440900--Sobic001G107300 Sobic002G289800 Sobic002G289800 Sobic001G440900--Sobic002G289800 Sobic001G440900--Sobic007G153700 Sobic004G287100 Sobic004G287100 Sobic001G033000--Sobic004G287100 Sobic006G245700 Sobic006G245700 Sobic001G033000--Sobic006G245700 Sobic005G120700 Sobic005G120700 Sobic001G033000--Sobic005G120700 Sobic003G199700 Sobic003G199700 Sobic001G033000--Sobic003G199700 Sobic001G033000--Sobic001G107300 Sobic006G251600 Sobic006G251600 Sobic001G033000--Sobic006G251600 Sobic007G209600 Sobic007G209600 Sobic001G033000--Sobic007G209600 Sobic006G127500 Sobic006G127500 Sobic001G033000--Sobic006G127500 Sobic001G061800 Sobic001G061800 Sobic001G033000--Sobic001G061800 Sobic004G212700 Sobic004G212700 Sobic004G206300--Sobic004G212700 Sobic004G027000 Sobic004G027000 Sobic004G206300--Sobic004G027000 Sobic004G206300--Sobic009G056300 Sobic004G129600 Sobic004G129600 Sobic004G206300--Sobic004G129600 Sobic009G031500 Sobic009G031500 Sobic004G206300--Sobic009G031500 Sobic004G206300--Sobic008G125000 Sobic004G225300 Sobic004G225300 Sobic004G206300--Sobic004G225300 Sobic001G335500 Sobic001G335500 Sobic004G206300--Sobic001G335500 Sobic004G206300--Sobic001G099800 Sobic007G153700--Sobic001G239100 Sobic001G468000 Sobic001G468000 Sobic007G153700--Sobic001G468000 Sobic009G006900 Sobic009G006900 Sobic007G153700--Sobic009G006900 Sobic007G153700--Sobic001G440900 Sobic003G274400 Sobic003G274400 Sobic007G153700--Sobic003G274400 Sobic010G237800 Sobic010G237800 Sobic007G153700--Sobic010G237800 Sobic007G153700--Sobic004G129600 Sobic007G153700--Sobic002G374200 Sobic007G153700--Sobic002G196500 Sobic008G008300--Sobic001G136500 Sobic008G008300--Sobic010G001800 Sobic008G008300--Sobic001G132900 Sobic003G016400 Sobic003G016400 Sobic008G008300--Sobic003G016400 Sobic008G008300--Sobic004G206300 Sobic008G008300--Sobic001G099800 Sobic008G107900 Sobic008G107900 Sobic008G008300--Sobic008G107900 Sobic008G008300--Sobic008G125000 Sobic009G256700 Sobic009G256700 Sobic008G008300--Sobic009G256700
Octagon: transcription factors


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