Gene annotation
Transcriptome id Sobic.006G181700.1
Synonym Sb06g025610, TIM23-1, ATTIM23-1
Functional annotation mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
UniProt C5YE22
Pfam PF02466
Panther DB PTHR15371 PTHR15371:SF3
NCBI CDD KOG3324; Mitochondrial import inner membrane translocase, subunit TIM23
KEGG Orthology K17794; mitochondrial import inner membrane translocase subunit TIM23
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17530 : translocase of inner mitochondrial membrane 23
RAP-DB (Rice) LOC_Os02g45100.1 : mitochondrial import inner membrane translocase subunit Tim17, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
2 Sobic.009G232500 expressed protein -
3 Sobic.002G241500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
4 Sobic.003G283300 expressed protein -
5 Sobic.001G132900 expressed protein -
6 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.010G194200 expressed protein -
9 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
10 Sobic.003G358400 3-oxo-5-alpha-steroid 4-dehydrogenase, putative, expressed K09591: steroid 5-alpha-reductase
11 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
12 Sobic.001G008800 expressed protein -
13 Sobic.009G077100 expressed protein -
14 Sobic.001G451901 - -
15 Sobic.006G281200 csAtPR5, putative, expressed -
16 Sobic.010G094800 pro-resilin precursor, putative, expressed -
17 Sobic.004G225300 e2f-associated phosphoprotein, putative, expressed -
18 Sobic.007G031100 RNA polymerase II complex component SRB7, putative, expressed K15152: MED21, mediator of RNA polymerase II transcription subunit 21
19 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21
20 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G


Gene co-expression network
sample Sobic006G181700 Sobic006G181700 Sobic004G018200 Sobic004G018200 Sobic006G181700--Sobic004G018200 Sobic009G232500 Sobic009G232500 Sobic006G181700--Sobic009G232500 Sobic002G241500 Sobic002G241500 Sobic006G181700--Sobic002G241500 Sobic003G283300 Sobic003G283300 Sobic006G181700--Sobic003G283300 Sobic001G132900 Sobic001G132900 Sobic006G181700--Sobic001G132900 Sobic003G003000 Sobic003G003000 Sobic006G181700--Sobic003G003000 Sobic003G016400 Sobic003G016400 Sobic006G181700--Sobic003G016400 Sobic010G194200 Sobic010G194200 Sobic006G181700--Sobic010G194200 Sobic001G188700 Sobic001G188700 Sobic006G181700--Sobic001G188700 Sobic004G018200--Sobic001G188700 Sobic004G018200--Sobic006G181700 Sobic007G019501 Sobic007G019501 Sobic004G018200--Sobic007G019501 Sobic009G156300 Sobic009G156300 Sobic004G018200--Sobic009G156300 Sobic010G039000 Sobic010G039000 Sobic004G018200--Sobic010G039000 Sobic004G018200--Sobic003G283300 Sobic009G077100 Sobic009G077100 Sobic004G018200--Sobic009G077100 Sobic006G094500 Sobic006G094500 Sobic004G018200--Sobic006G094500 Sobic001G451901 Sobic001G451901 Sobic004G018200--Sobic001G451901 Sobic003G410200 Sobic003G410200 Sobic009G232500--Sobic003G410200 Sobic001G107300 Sobic001G107300 Sobic009G232500--Sobic001G107300 Sobic003G109200 Sobic003G109200 Sobic009G232500--Sobic003G109200 Sobic002G374200 Sobic002G374200 Sobic009G232500--Sobic002G374200 Sobic009G232500--Sobic006G181700 Sobic001G478700 Sobic001G478700 Sobic009G232500--Sobic001G478700 Sobic007G010200 Sobic007G010200 Sobic009G232500--Sobic007G010200 Sobic001G239100 Sobic001G239100 Sobic009G232500--Sobic001G239100 Sobic007G031100 Sobic007G031100 Sobic009G232500--Sobic007G031100 Sobic006G281200 Sobic006G281200 Sobic002G241500--Sobic006G281200 Sobic010G001800 Sobic010G001800 Sobic002G241500--Sobic010G001800 Sobic010G159100 Sobic010G159100 Sobic002G241500--Sobic010G159100 Sobic002G241500--Sobic003G003000 Sobic002G241500--Sobic003G283300 Sobic002G361900 Sobic002G361900 Sobic002G241500--Sobic002G361900 Sobic002G241500--Sobic006G181700 Sobic008G127500 Sobic008G127500 Sobic002G241500--Sobic008G127500 Sobic001G110300 Sobic001G110300 Sobic002G241500--Sobic001G110300 Sobic003G283300--Sobic001G451901 Sobic003G283300--Sobic002G241500 Sobic003G283300--Sobic001G110300 Sobic010G197900 Sobic010G197900 Sobic003G283300--Sobic010G197900 Sobic004G113700 Sobic004G113700 Sobic003G283300--Sobic004G113700 Sobic007G217400 Sobic007G217400 Sobic003G283300--Sobic007G217400 Sobic006G231500 Sobic006G231500 Sobic003G283300--Sobic006G231500 Sobic009G001900 Sobic009G001900 Sobic003G283300--Sobic009G001900 Sobic003G283300--Sobic006G181700 Sobic001G132900--Sobic003G003000 Sobic001G008800 Sobic001G008800 Sobic001G132900--Sobic001G008800 Sobic009G209100 Sobic009G209100 Sobic001G132900--Sobic009G209100 Sobic001G129400 Sobic001G129400 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic010G018000 Sobic010G018000 Sobic001G132900--Sobic010G018000 Sobic001G136500 Sobic001G136500 Sobic001G132900--Sobic001G136500 Sobic009G130400 Sobic009G130400 Sobic001G132900--Sobic009G130400 Sobic004G117800 Sobic004G117800 Sobic001G132900--Sobic004G117800 Sobic003G003000--Sobic001G129400 Sobic003G003000--Sobic001G132900 Sobic003G003000--Sobic006G281200 Sobic003G003000--Sobic010G018000 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic003G016400--Sobic003G003000 Sobic008G008300 Sobic008G008300 Sobic003G016400--Sobic008G008300 Sobic003G016400--Sobic001G132900 Sobic003G016400--Sobic001G136500 Sobic003G016400--Sobic006G181700 Sobic010G079800 Sobic010G079800 Sobic003G016400--Sobic010G079800 Sobic004G275100 Sobic004G275100 Sobic003G016400--Sobic004G275100 Sobic008G107900 Sobic008G107900 Sobic003G016400--Sobic008G107900 Sobic006G276200 Sobic006G276200 Sobic003G016400--Sobic006G276200 Sobic010G194200--Sobic001G129400 Sobic001G060300 Sobic001G060300 Sobic010G194200--Sobic001G060300 Sobic003G326900 Sobic003G326900 Sobic010G194200--Sobic003G326900 Sobic010G194200--Sobic001G451901 Sobic001G473400 Sobic001G473400 Sobic010G194200--Sobic001G473400 Sobic005G132700 Sobic005G132700 Sobic010G194200--Sobic005G132700 Sobic004G106700 Sobic004G106700 Sobic010G194200--Sobic004G106700 Sobic006G153200 Sobic006G153200 Sobic010G194200--Sobic006G153200 Sobic010G194200--Sobic001G110300 Sobic005G110526 Sobic005G110526 Sobic001G188700--Sobic005G110526 Sobic001G188700--Sobic004G018200 Sobic001G188700--Sobic006G094500 Sobic009G187600 Sobic009G187600 Sobic001G188700--Sobic009G187600 Sobic001G188700--Sobic007G031100 Sobic008G125000 Sobic008G125000 Sobic001G188700--Sobic008G125000 Sobic001G188700--Sobic001G132900 Sobic003G058900 Sobic003G058900 Sobic001G188700--Sobic003G058900 Sobic001G434400 Sobic001G434400 Sobic001G188700--Sobic001G434400
Octagon: transcription factors


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