Gene annotation
Transcriptome id Sobic.003G283300.2,Sobic.003G283300.1
Synonym Sb03g033450
Functional annotation expressed protein
UniProt C5XIZ6
Pfam -
Panther DB PTHR36806
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45660 : -
RAP-DB (Rice) LOC_Os01g52760.1,LOC_Os01g52760.2 : expressed protein
MaizeGDB (Corn) Zm00025a027718
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451901 - -
2 Sobic.002G241500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
3 Sobic.001G110300 fb27, putative, expressed -
4 Sobic.010G197900 expressed protein -
5 Sobic.004G113700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K13127: RNF113A, RING finger protein 113A
6 Sobic.007G217400 COP9 signalosome complex subunit 6a, putative, expressed K12179: COPS6, COP9 signalosome complex subunit 6
7 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
8 Sobic.009G001900 expressed protein -
9 Sobic.006G181700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
10 Sobic.009G077100 expressed protein -
11 Sobic.006G079900 COP9 signalosome complex subunit 8, putative, expressed K12181: COPS8, COP9 signalosome complex subunit 8
12 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
13 Sobic.003G028100 MPPN domain containing protein, expressed K14313: NUP35, nuclear pore complex protein Nup53
14 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
15 Sobic.007G019501 - K13448: calcium-binding protein CML
16 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
17 Sobic.009G171100 prenylated rab acceptor, putative, expressed -
18 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
19 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
20 Sobic.007G091000 thioredoxin domain-containing protein 9, putative, expressed -


Gene co-expression network
sample Sobic003G283300 Sobic003G283300 Sobic001G451901 Sobic001G451901 Sobic003G283300--Sobic001G451901 Sobic002G241500 Sobic002G241500 Sobic003G283300--Sobic002G241500 Sobic001G110300 Sobic001G110300 Sobic003G283300--Sobic001G110300 Sobic010G197900 Sobic010G197900 Sobic003G283300--Sobic010G197900 Sobic004G113700 Sobic004G113700 Sobic003G283300--Sobic004G113700 Sobic007G217400 Sobic007G217400 Sobic003G283300--Sobic007G217400 Sobic006G231500 Sobic006G231500 Sobic003G283300--Sobic006G231500 Sobic009G001900 Sobic009G001900 Sobic003G283300--Sobic009G001900 Sobic006G181700 Sobic006G181700 Sobic003G283300--Sobic006G181700 Sobic001G451901--Sobic001G110300 Sobic001G060300 Sobic001G060300 Sobic001G451901--Sobic001G060300 Sobic004G184000 Sobic004G184000 Sobic001G451901--Sobic004G184000 Sobic001G129400 Sobic001G129400 Sobic001G451901--Sobic001G129400 Sobic001G451901--Sobic003G283300 Sobic010G194200 Sobic010G194200 Sobic001G451901--Sobic010G194200 Sobic004G262300 Sobic004G262300 Sobic001G451901--Sobic004G262300 Sobic004G025300 Sobic004G025300 Sobic001G451901--Sobic004G025300 Sobic003G217100 Sobic003G217100 Sobic001G451901--Sobic003G217100 Sobic006G281200 Sobic006G281200 Sobic002G241500--Sobic006G281200 Sobic010G001800 Sobic010G001800 Sobic002G241500--Sobic010G001800 Sobic010G159100 Sobic010G159100 Sobic002G241500--Sobic010G159100 Sobic003G003000 Sobic003G003000 Sobic002G241500--Sobic003G003000 Sobic002G241500--Sobic003G283300 Sobic002G361900 Sobic002G361900 Sobic002G241500--Sobic002G361900 Sobic002G241500--Sobic006G181700 Sobic008G127500 Sobic008G127500 Sobic002G241500--Sobic008G127500 Sobic002G241500--Sobic001G110300 Sobic004G106700 Sobic004G106700 Sobic001G110300--Sobic004G106700 Sobic001G110300--Sobic001G451901 Sobic003G305100 Sobic003G305100 Sobic001G110300--Sobic003G305100 Sobic001G110300--Sobic004G184000 Sobic005G110526 Sobic005G110526 Sobic001G110300--Sobic005G110526 Sobic001G110300--Sobic001G129400 Sobic001G110300--Sobic006G231500 Sobic006G237200 Sobic006G237200 Sobic001G110300--Sobic006G237200 Sobic002G260200 Sobic002G260200 Sobic001G110300--Sobic002G260200 Sobic003G131300 Sobic003G131300 Sobic010G197900--Sobic003G131300 Sobic001G367000 Sobic001G367000 Sobic010G197900--Sobic001G367000 Sobic002G401700 Sobic002G401700 Sobic010G197900--Sobic002G401700 Sobic006G094600 Sobic006G094600 Sobic010G197900--Sobic006G094600 Sobic008G136800 Sobic008G136800 Sobic010G197900--Sobic008G136800 Sobic003G374000 Sobic003G374000 Sobic010G197900--Sobic003G374000 Sobic004G344800 Sobic004G344800 Sobic010G197900--Sobic004G344800 Sobic010G197900--Sobic009G001900 Sobic004G164000 Sobic004G164000 Sobic010G197900--Sobic004G164000 Sobic003G362400 Sobic003G362400 Sobic004G113700--Sobic003G362400 Sobic002G078400 Sobic002G078400 Sobic004G113700--Sobic002G078400 Sobic004G325200 Sobic004G325200 Sobic004G113700--Sobic004G325200 Sobic010G065400 Sobic010G065400 Sobic004G113700--Sobic010G065400 Sobic010G148400 Sobic010G148400 Sobic004G113700--Sobic010G148400 Sobic009G094450 Sobic009G094450 Sobic004G113700--Sobic009G094450 Sobic005G092800 Sobic005G092800 Sobic004G113700--Sobic005G092800 Sobic010G257100 Sobic010G257100 Sobic004G113700--Sobic010G257100 Sobic001G117400 Sobic001G117400 Sobic004G113700--Sobic001G117400 Sobic001G542900 Sobic001G542900 Sobic007G217400--Sobic001G542900 Sobic009G212300 Sobic009G212300 Sobic007G217400--Sobic009G212300 Sobic006G079900 Sobic006G079900 Sobic007G217400--Sobic006G079900 Sobic007G165300 Sobic007G165300 Sobic007G217400--Sobic007G165300 Sobic008G137600 Sobic008G137600 Sobic007G217400--Sobic008G137600 Sobic009G234400 Sobic009G234400 Sobic007G217400--Sobic009G234400 Sobic009G207200 Sobic009G207200 Sobic007G217400--Sobic009G207200 Sobic002G423800 Sobic002G423800 Sobic007G217400--Sobic002G423800 Sobic006G211800 Sobic006G211800 Sobic007G217400--Sobic006G211800 Sobic006G231500--Sobic003G305100 Sobic006G231500--Sobic009G212300 Sobic006G231500--Sobic009G001900 Sobic004G202100 Sobic004G202100 Sobic006G231500--Sobic004G202100 Sobic004G012800 Sobic004G012800 Sobic006G231500--Sobic004G012800 Sobic006G109700 Sobic006G109700 Sobic006G231500--Sobic006G109700 Sobic007G091000 Sobic007G091000 Sobic006G231500--Sobic007G091000 Sobic002G296200 Sobic002G296200 Sobic006G231500--Sobic002G296200 Sobic001G286300 Sobic001G286300 Sobic006G231500--Sobic001G286300 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic006G203900 Sobic006G203900 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic009G001900--Sobic004G164000 Sobic009G001900--Sobic006G231500 Sobic004G260200 Sobic004G260200 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic004G018200 Sobic004G018200 Sobic006G181700--Sobic004G018200 Sobic009G232500 Sobic009G232500 Sobic006G181700--Sobic009G232500 Sobic006G181700--Sobic002G241500 Sobic006G181700--Sobic003G283300 Sobic001G132900 Sobic001G132900 Sobic006G181700--Sobic001G132900 Sobic006G181700--Sobic003G003000 Sobic003G016400 Sobic003G016400 Sobic006G181700--Sobic003G016400 Sobic006G181700--Sobic010G194200 Sobic001G188700 Sobic001G188700 Sobic006G181700--Sobic001G188700
Octagon: transcription factors


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