Gene annotation
Transcriptome id Sobic.003G016400.1
Synonym Sb03g001630
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6Q0U2
Pfam -
Panther DB PTHR37227 PTHR37227:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G25545 : -
RAP-DB (Rice) LOC_Os01g11970.1 : expressed protein
MaizeGDB (Corn) Zm00025a022890
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G016400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G003000 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
2 Sobic.008G008300 expressed protein -
3 Sobic.001G132900 expressed protein -
4 Sobic.001G136500 RNA recognition motif containing protein, expressed K12885: RBMX, heterogeneous nuclear ribonucleoprotein G
5 Sobic.006G181700 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
6 Sobic.010G079800 expressed protein -
7 Sobic.004G275100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.008G107900 glycine-rich protein, putative, expressed -
9 Sobic.006G276200 F-box domain containing protein, expressed -
10 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
11 Sobic.010G094800 pro-resilin precursor, putative, expressed -
12 Sobic.002G175900 expressed protein -
13 Sobic.001G099800 nucleic acid binding protein, putative, expressed -
14 Sobic.002G287750 - -
15 Sobic.001G011800 SAM domain containing protein, putative, expressed -
16 Sobic.010G018000 39S ribosomal protein L47, mitochondrial precursor, putative, expressed K17428: MRPL47, large subunit ribosomal protein L47
17 Sobic.003G122100 FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
18 Sobic.009G188300 universal stress protein domain containing protein, putative, expressed -
19 Sobic.002G241500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
20 Sobic.001G129400 ribosomal protein-related, putative, expressed K02970: RP-S21, MRPS21, small subunit ribosomal protein S21


Gene co-expression network
sample Sobic003G016400 Sobic003G016400 Sobic003G003000 Sobic003G003000 Sobic003G016400--Sobic003G003000 Sobic008G008300 Sobic008G008300 Sobic003G016400--Sobic008G008300 Sobic001G132900 Sobic001G132900 Sobic003G016400--Sobic001G132900 Sobic001G136500 Sobic001G136500 Sobic003G016400--Sobic001G136500 Sobic006G181700 Sobic006G181700 Sobic003G016400--Sobic006G181700 Sobic010G079800 Sobic010G079800 Sobic003G016400--Sobic010G079800 Sobic004G275100 Sobic004G275100 Sobic003G016400--Sobic004G275100 Sobic008G107900 Sobic008G107900 Sobic003G016400--Sobic008G107900 Sobic006G276200 Sobic006G276200 Sobic003G016400--Sobic006G276200 Sobic001G129400 Sobic001G129400 Sobic003G003000--Sobic001G129400 Sobic003G003000--Sobic001G132900 Sobic006G281200 Sobic006G281200 Sobic003G003000--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic003G003000--Sobic010G018000 Sobic001G008800 Sobic001G008800 Sobic003G003000--Sobic001G008800 Sobic004G018400 Sobic004G018400 Sobic003G003000--Sobic004G018400 Sobic002G117200 Sobic002G117200 Sobic003G003000--Sobic002G117200 Sobic010G094800 Sobic010G094800 Sobic003G003000--Sobic010G094800 Sobic005G127100 Sobic005G127100 Sobic003G003000--Sobic005G127100 Sobic008G008300--Sobic001G136500 Sobic010G001800 Sobic010G001800 Sobic008G008300--Sobic010G001800 Sobic008G008300--Sobic001G132900 Sobic008G008300--Sobic003G016400 Sobic004G206300 Sobic004G206300 Sobic008G008300--Sobic004G206300 Sobic001G099800 Sobic001G099800 Sobic008G008300--Sobic001G099800 Sobic008G008300--Sobic008G107900 Sobic008G125000 Sobic008G125000 Sobic008G008300--Sobic008G125000 Sobic009G256700 Sobic009G256700 Sobic008G008300--Sobic009G256700 Sobic001G132900--Sobic003G003000 Sobic001G132900--Sobic001G008800 Sobic009G209100 Sobic009G209100 Sobic001G132900--Sobic009G209100 Sobic001G132900--Sobic001G129400 Sobic001G404100 Sobic001G404100 Sobic001G132900--Sobic001G404100 Sobic001G132900--Sobic010G018000 Sobic001G132900--Sobic001G136500 Sobic009G130400 Sobic009G130400 Sobic001G132900--Sobic009G130400 Sobic004G117800 Sobic004G117800 Sobic001G132900--Sobic004G117800 Sobic001G136500--Sobic001G132900 Sobic001G136500--Sobic001G099800 Sobic009G056300 Sobic009G056300 Sobic001G136500--Sobic009G056300 Sobic001G136500--Sobic008G008300 Sobic001G136500--Sobic010G079800 Sobic001G136500--Sobic006G276200 Sobic004G146200 Sobic004G146200 Sobic001G136500--Sobic004G146200 Sobic001G136500--Sobic008G125000 Sobic001G136500--Sobic004G206300 Sobic004G018200 Sobic004G018200 Sobic006G181700--Sobic004G018200 Sobic009G232500 Sobic009G232500 Sobic006G181700--Sobic009G232500 Sobic002G241500 Sobic002G241500 Sobic006G181700--Sobic002G241500 Sobic003G283300 Sobic003G283300 Sobic006G181700--Sobic003G283300 Sobic006G181700--Sobic001G132900 Sobic006G181700--Sobic003G003000 Sobic006G181700--Sobic003G016400 Sobic010G194200 Sobic010G194200 Sobic006G181700--Sobic010G194200 Sobic001G188700 Sobic001G188700 Sobic006G181700--Sobic001G188700 Sobic001G239100 Sobic001G239100 Sobic010G079800--Sobic001G239100 Sobic007G050300 Sobic007G050300 Sobic010G079800--Sobic007G050300 Sobic010G079800--Sobic001G136500 Sobic010G079800--Sobic004G146200 Sobic007G153700 Sobic007G153700 Sobic010G079800--Sobic007G153700 Sobic007G031100 Sobic007G031100 Sobic010G079800--Sobic007G031100 Sobic001G478700 Sobic001G478700 Sobic010G079800--Sobic001G478700 Sobic010G079800--Sobic004G206300 Sobic010G079800--Sobic001G188700 Sobic004G275100--Sobic003G016400 Sobic007G139900 Sobic007G139900 Sobic004G275100--Sobic007G139900 Sobic001G109100 Sobic001G109100 Sobic004G275100--Sobic001G109100 Sobic009G010400 Sobic009G010400 Sobic004G275100--Sobic009G010400 Sobic002G349400 Sobic002G349400 Sobic004G275100--Sobic002G349400 Sobic002G175900 Sobic002G175900 Sobic004G275100--Sobic002G175900 Sobic001G315800 Sobic001G315800 Sobic004G275100--Sobic001G315800 Sobic007G224300 Sobic007G224300 Sobic004G275100--Sobic007G224300 Sobic004G275100--Sobic004G018400 Sobic001G473400 Sobic001G473400 Sobic008G107900--Sobic001G473400 Sobic005G110526 Sobic005G110526 Sobic008G107900--Sobic005G110526 Sobic010G258000 Sobic010G258000 Sobic008G107900--Sobic010G258000 Sobic004G184000 Sobic004G184000 Sobic008G107900--Sobic004G184000 Sobic009G016500 Sobic009G016500 Sobic008G107900--Sobic009G016500 Sobic008G107900--Sobic007G031100 Sobic003G410200 Sobic003G410200 Sobic008G107900--Sobic003G410200 Sobic008G107900--Sobic008G008300 Sobic008G107900--Sobic001G188700 Sobic001G434400 Sobic001G434400 Sobic006G276200--Sobic001G434400 Sobic001G544100 Sobic001G544100 Sobic006G276200--Sobic001G544100 Sobic010G088300 Sobic010G088300 Sobic006G276200--Sobic010G088300 Sobic002G279000 Sobic002G279000 Sobic006G276200--Sobic002G279000 Sobic004G242100 Sobic004G242100 Sobic006G276200--Sobic004G242100 Sobic006G276200--Sobic001G136500 Sobic006G276200--Sobic003G003000 Sobic001G199300 Sobic001G199300 Sobic006G276200--Sobic001G199300 Sobic007G043600 Sobic007G043600 Sobic006G276200--Sobic007G043600
Octagon: transcription factors


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