Gene annotation
Transcriptome id Sobic.009G188300.1
Synonym Sb09g024745
Functional annotation universal stress protein domain containing protein, putative, expressed
UniProt C5Z0G0
Pfam PF00582
Panther DB PTHR31966 PTHR31966:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT1G11360 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os01g57450.1 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039880 , Zm00025a048340 , Zm00025a027264 , Zm00025a044141 , Zm00025a014872
Brachypodium KQK05543 , KQK10087
Barley HORVU3Hr1G077000.6 , HORVU3Hr1G077000.5 , HORVU3Hr1G077000.4 , HORVU3Hr1G077000.3 , HORVU3Hr1G077000.2 , HORVU3Hr1G077000.1 , HORVU1Hr1G066100.2 , HORVU1Hr1G066100.3 , HORVU1Hr1G066100.1 , HORVU1Hr1G066100.6 , HORVU1Hr1G066100.7 , HORVU1Hr1G066100.4 , HORVU1Hr1G066100.5
Wheat TraesCS3B02G351300 , TraesCS1A02G321000 , TraesCS1B02G333600 , TraesCS3D02G315900 , TraesCS1D02G321100 , TraesCS3A02G315600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261549 - -
2 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
3 Sobic.009G102100 DUF538 domain containing protein, putative, expressed -
4 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
5 Sobic.007G043600 LSM domain containing protein, expressed K12621: U6 snRNA-associated Sm-like protein LSm2
6 Sobic.009G165500 Lung seven transmembrane receptor domain containing protein, putative, expressed -
7 Sobic.010G001800 DNA-binding protein-related, putative, expressed K07466: RFA1, RPA1, replication factor A1
8 Sobic.006G102900 expressed protein -
9 Sobic.006G278100 expressed protein -
10 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
11 Sobic.006G191700 expansin precursor, putative, expressed -
12 Sobic.001G231200 expressed protein -
13 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
14 Sobic.002G162300 expressed protein K11270: chromosome transmission fidelity protein 8
15 Sobic.009G194900 glucan endo-1,3-beta-glucosidase-like protein 3 precursor, putative, expressed -
16 Sobic.001G401600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
17 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
18 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
19 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
20 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase


Gene co-expression network
sample Sobic009G188300 Sobic009G188300 Sobic001G261549 Sobic001G261549 Sobic009G188300--Sobic001G261549 Sobic001G440900 Sobic001G440900 Sobic009G188300--Sobic001G440900 Sobic009G102100 Sobic009G102100 Sobic009G188300--Sobic009G102100 Sobic006G013900 Sobic006G013900 Sobic009G188300--Sobic006G013900 Sobic007G043600 Sobic007G043600 Sobic009G188300--Sobic007G043600 Sobic009G165500 Sobic009G165500 Sobic009G188300--Sobic009G165500 Sobic010G001800 Sobic010G001800 Sobic009G188300--Sobic010G001800 Sobic006G102900 Sobic006G102900 Sobic009G188300--Sobic006G102900 Sobic006G278100 Sobic006G278100 Sobic009G188300--Sobic006G278100 Sobic001G261549--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic001G261549--Sobic004G285900 Sobic009G189200 Sobic009G189200 Sobic001G261549--Sobic009G189200 Sobic006G191700 Sobic006G191700 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic003G107200 Sobic003G107200 Sobic001G261549--Sobic003G107200 Sobic001G078600 Sobic001G078600 Sobic001G261549--Sobic001G078600 Sobic007G154500 Sobic007G154500 Sobic001G261549--Sobic007G154500 Sobic008G096200 Sobic008G096200 Sobic001G261549--Sobic008G096200 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic001G440900--Sobic010G001800 Sobic001G289900 Sobic001G289900 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G235700 Sobic001G235700 Sobic001G440900--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic001G440900--Sobic001G107300 Sobic002G289800 Sobic002G289800 Sobic001G440900--Sobic002G289800 Sobic007G153700 Sobic007G153700 Sobic001G440900--Sobic007G153700 Sobic005G047000 Sobic005G047000 Sobic009G102100--Sobic005G047000 Sobic009G102100--Sobic009G188300 Sobic009G102100--Sobic006G013900 Sobic009G115100 Sobic009G115100 Sobic009G102100--Sobic009G115100 Sobic004G137900 Sobic004G137900 Sobic009G102100--Sobic004G137900 Sobic002G317600 Sobic002G317600 Sobic009G102100--Sobic002G317600 Sobic004G010700 Sobic004G010700 Sobic009G102100--Sobic004G010700 Sobic004G015300 Sobic004G015300 Sobic009G102100--Sobic004G015300 Sobic009G258600 Sobic009G258600 Sobic009G102100--Sobic009G258600 Sobic006G231700 Sobic006G231700 Sobic006G013900--Sobic006G231700 Sobic002G051200 Sobic002G051200 Sobic006G013900--Sobic002G051200 Sobic001G162800 Sobic001G162800 Sobic006G013900--Sobic001G162800 Sobic006G013900--Sobic004G137900 Sobic001G154400 Sobic001G154400 Sobic006G013900--Sobic001G154400 Sobic004G343600 Sobic004G343600 Sobic006G013900--Sobic004G343600 Sobic002G331300 Sobic002G331300 Sobic006G013900--Sobic002G331300 Sobic005G206700 Sobic005G206700 Sobic006G013900--Sobic005G206700 Sobic002G386300 Sobic002G386300 Sobic006G013900--Sobic002G386300 Sobic003G003000 Sobic003G003000 Sobic007G043600--Sobic003G003000 Sobic006G281200 Sobic006G281200 Sobic007G043600--Sobic006G281200 Sobic010G018000 Sobic010G018000 Sobic007G043600--Sobic010G018000 Sobic001G473400 Sobic001G473400 Sobic007G043600--Sobic001G473400 Sobic006G079900 Sobic006G079900 Sobic007G043600--Sobic006G079900 Sobic007G043600--Sobic009G188300 Sobic009G124400 Sobic009G124400 Sobic007G043600--Sobic009G124400 Sobic007G043600--Sobic004G137900 Sobic006G276200 Sobic006G276200 Sobic007G043600--Sobic006G276200 Sobic003G084300 Sobic003G084300 Sobic009G165500--Sobic003G084300 Sobic001G505000 Sobic001G505000 Sobic009G165500--Sobic001G505000 Sobic006G149200 Sobic006G149200 Sobic009G165500--Sobic006G149200 Sobic010G238800 Sobic010G238800 Sobic009G165500--Sobic010G238800 Sobic010G054200 Sobic010G054200 Sobic009G165500--Sobic010G054200 Sobic001G429000 Sobic001G429000 Sobic009G165500--Sobic001G429000 Sobic008G135000 Sobic008G135000 Sobic009G165500--Sobic008G135000 Sobic001G412500 Sobic001G412500 Sobic009G165500--Sobic001G412500 Sobic006G201500 Sobic006G201500 Sobic009G165500--Sobic006G201500 Sobic010G001800--Sobic001G440900 Sobic007G108100 Sobic007G108100 Sobic010G001800--Sobic007G108100 Sobic002G241500 Sobic002G241500 Sobic010G001800--Sobic002G241500 Sobic010G159100 Sobic010G159100 Sobic010G001800--Sobic010G159100 Sobic010G001800--Sobic001G505000 Sobic008G008300 Sobic008G008300 Sobic010G001800--Sobic008G008300 Sobic008G093200 Sobic008G093200 Sobic010G001800--Sobic008G093200 Sobic001G108400 Sobic001G108400 Sobic010G001800--Sobic001G108400 Sobic009G001200 Sobic009G001200 Sobic010G001800--Sobic009G001200 Sobic006G102900--Sobic001G078600 Sobic006G102900--Sobic003G107200 Sobic009G181500 Sobic009G181500 Sobic006G102900--Sobic009G181500 Sobic006G102900--Sobic001G261549 Sobic006G102900--Sobic007G154500 Sobic002G426800 Sobic002G426800 Sobic006G102900--Sobic002G426800 Sobic010G274000 Sobic010G274000 Sobic006G102900--Sobic010G274000 Sobic004G047100 Sobic004G047100 Sobic006G102900--Sobic004G047100 Sobic006G102900--Sobic009G189200 Sobic007G150800 Sobic007G150800 Sobic006G278100--Sobic007G150800 Sobic001G107100 Sobic001G107100 Sobic006G278100--Sobic001G107100 Sobic002G128800 Sobic002G128800 Sobic006G278100--Sobic002G128800 Sobic003G250700 Sobic003G250700 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic002G338400 Sobic002G338400 Sobic006G278100--Sobic002G338400 Sobic003G122200 Sobic003G122200 Sobic006G278100--Sobic003G122200 Sobic006G278100--Sobic006G191700 Sobic006G278100--Sobic001G261549
Octagon: transcription factors


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