Gene annotation
Transcriptome id Sobic.001G011800.1
Synonym Sb01g001150
Functional annotation SAM domain containing protein, putative, expressed
UniProt C5WSW0
Pfam PF00536
Panther DB PTHR10627
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G48800 : Sterile alpha motif (SAM) domain-containing protein
RAP-DB (Rice) LOC_Os03g63320.1 : SAM domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009031 , Zm00025a016329
Brachypodium KQK12129
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G011800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G127300 pentatricopeptide repeat-containing protein, putative, expressed -
2 Sobic.007G181600 dehydrogenase, putative, expressed K00008: SORD, L-iditol 2-dehydrogenase
3 Sobic.007G050300 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
4 Sobic.004G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
5 Sobic.010G079800 expressed protein -
6 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
7 Sobic.002G400400 choline transporter-related, putative, expressed -
8 Sobic.006G276200 F-box domain containing protein, expressed -
9 Sobic.003G436500 ubiquitin-fold modifier 1 precursor, putative, expressed K12162: ubiquitin-fold modifier 1
10 Sobic.008G051400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
11 Sobic.001G463400 expressed protein -
12 Sobic.001G418800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
13 Sobic.001G434400 ufm1-conjugating enzyme 1, putative, expressed K12165: ufm1-conjugating enzyme 1
14 Sobic.001G218800 expressed protein -
15 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G137400 cysteine-rich receptor-like protein kinase 10 precursor, putative, expressed -
17 Sobic.007G224300 RING finger protein, putative, expressed -
18 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
19 Sobic.004G015400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
20 Sobic.002G175900 expressed protein -


Gene co-expression network
sample Sobic001G011800 Sobic001G011800 Sobic009G127300 Sobic009G127300 Sobic001G011800--Sobic009G127300 Sobic007G181600 Sobic007G181600 Sobic001G011800--Sobic007G181600 Sobic007G050300 Sobic007G050300 Sobic001G011800--Sobic007G050300 Sobic004G298700 Sobic004G298700 Sobic001G011800--Sobic004G298700 Sobic010G079800 Sobic010G079800 Sobic001G011800--Sobic010G079800 Sobic006G094500 Sobic006G094500 Sobic001G011800--Sobic006G094500 Sobic002G400400 Sobic002G400400 Sobic001G011800--Sobic002G400400 Sobic006G276200 Sobic006G276200 Sobic001G011800--Sobic006G276200 Sobic003G436500 Sobic003G436500 Sobic001G011800--Sobic003G436500 Sobic009G127300--Sobic001G011800 Sobic009G127300--Sobic003G436500 Sobic004G023900 Sobic004G023900 Sobic009G127300--Sobic004G023900 Sobic009G127300--Sobic006G276200 Sobic001G147100 Sobic001G147100 Sobic009G127300--Sobic001G147100 Sobic004G028000 Sobic004G028000 Sobic009G127300--Sobic004G028000 Sobic001G218800 Sobic001G218800 Sobic009G127300--Sobic001G218800 Sobic002G037800 Sobic002G037800 Sobic009G127300--Sobic002G037800 Sobic001G012100 Sobic001G012100 Sobic009G127300--Sobic001G012100 Sobic007G181600--Sobic004G298700 Sobic007G090442 Sobic007G090442 Sobic007G181600--Sobic007G090442 Sobic006G180900 Sobic006G180900 Sobic007G181600--Sobic006G180900 Sobic001G310500 Sobic001G310500 Sobic007G181600--Sobic001G310500 Sobic008G013000 Sobic008G013000 Sobic007G181600--Sobic008G013000 Sobic010G095300 Sobic010G095300 Sobic007G181600--Sobic010G095300 Sobic003G111400 Sobic003G111400 Sobic007G181600--Sobic003G111400 Sobic001G037800 Sobic001G037800 Sobic007G181600--Sobic001G037800 Sobic007G181600--Sobic001G011800 Sobic006G051900 Sobic006G051900 Sobic007G050300--Sobic006G051900 Sobic006G120800 Sobic006G120800 Sobic007G050300--Sobic006G120800 Sobic010G197800 Sobic010G197800 Sobic007G050300--Sobic010G197800 Sobic002G095700 Sobic002G095700 Sobic007G050300--Sobic002G095700 Sobic009G192500 Sobic009G192500 Sobic007G050300--Sobic009G192500 Sobic007G050300--Sobic010G079800 Sobic001G038100 Sobic001G038100 Sobic007G050300--Sobic001G038100 Sobic003G253400 Sobic003G253400 Sobic007G050300--Sobic003G253400 Sobic007G117100 Sobic007G117100 Sobic007G050300--Sobic007G117100 Sobic004G298700--Sobic007G181600 Sobic004G298700--Sobic001G011800 Sobic006G245000 Sobic006G245000 Sobic004G298700--Sobic006G245000 Sobic002G271600 Sobic002G271600 Sobic004G298700--Sobic002G271600 Sobic004G298700--Sobic006G180900 Sobic008G051400 Sobic008G051400 Sobic004G298700--Sobic008G051400 Sobic004G298700--Sobic009G127300 Sobic005G129000 Sobic005G129000 Sobic004G298700--Sobic005G129000 Sobic005G089000 Sobic005G089000 Sobic004G298700--Sobic005G089000 Sobic001G239100 Sobic001G239100 Sobic010G079800--Sobic001G239100 Sobic010G079800--Sobic007G050300 Sobic001G136500 Sobic001G136500 Sobic010G079800--Sobic001G136500 Sobic004G146200 Sobic004G146200 Sobic010G079800--Sobic004G146200 Sobic007G153700 Sobic007G153700 Sobic010G079800--Sobic007G153700 Sobic007G031100 Sobic007G031100 Sobic010G079800--Sobic007G031100 Sobic001G478700 Sobic001G478700 Sobic010G079800--Sobic001G478700 Sobic004G206300 Sobic004G206300 Sobic010G079800--Sobic004G206300 Sobic001G188700 Sobic001G188700 Sobic010G079800--Sobic001G188700 Sobic009G187600 Sobic009G187600 Sobic006G094500--Sobic009G187600 Sobic007G224300 Sobic007G224300 Sobic006G094500--Sobic007G224300 Sobic006G094500--Sobic001G188700 Sobic001G451901 Sobic001G451901 Sobic006G094500--Sobic001G451901 Sobic001G434400 Sobic001G434400 Sobic006G094500--Sobic001G434400 Sobic002G422400 Sobic002G422400 Sobic006G094500--Sobic002G422400 Sobic004G018200 Sobic004G018200 Sobic006G094500--Sobic004G018200 Sobic002G280900 Sobic002G280900 Sobic006G094500--Sobic002G280900 Sobic006G094500--Sobic007G031100 Sobic001G033400 Sobic001G033400 Sobic002G400400--Sobic001G033400 Sobic002G103700 Sobic002G103700 Sobic002G400400--Sobic002G103700 Sobic002G400400--Sobic003G436500 Sobic008G160500 Sobic008G160500 Sobic002G400400--Sobic008G160500 Sobic001G310700 Sobic001G310700 Sobic002G400400--Sobic001G310700 Sobic003G159500 Sobic003G159500 Sobic002G400400--Sobic003G159500 Sobic002G400400--Sobic007G050300 Sobic010G207400 Sobic010G207400 Sobic002G400400--Sobic010G207400 Sobic001G039500 Sobic001G039500 Sobic002G400400--Sobic001G039500 Sobic006G276200--Sobic001G434400 Sobic001G544100 Sobic001G544100 Sobic006G276200--Sobic001G544100 Sobic010G088300 Sobic010G088300 Sobic006G276200--Sobic010G088300 Sobic002G279000 Sobic002G279000 Sobic006G276200--Sobic002G279000 Sobic004G242100 Sobic004G242100 Sobic006G276200--Sobic004G242100 Sobic006G276200--Sobic001G136500 Sobic003G003000 Sobic003G003000 Sobic006G276200--Sobic003G003000 Sobic001G199300 Sobic001G199300 Sobic006G276200--Sobic001G199300 Sobic007G043600 Sobic007G043600 Sobic006G276200--Sobic007G043600 Sobic002G359900 Sobic002G359900 Sobic003G436500--Sobic002G359900 Sobic003G031200 Sobic003G031200 Sobic003G436500--Sobic003G031200 Sobic003G436500--Sobic002G400400 Sobic003G436500--Sobic001G147100 Sobic005G187500 Sobic005G187500 Sobic003G436500--Sobic005G187500 Sobic010G253100 Sobic010G253100 Sobic003G436500--Sobic010G253100 Sobic004G028800 Sobic004G028800 Sobic003G436500--Sobic004G028800 Sobic003G436500--Sobic008G160500 Sobic002G129200 Sobic002G129200 Sobic003G436500--Sobic002G129200
Octagon: transcription factors


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