Gene annotation
Transcriptome id Sobic.008G051400.2,Sobic.008G051400.3,Sobic.008G051400.5,Sobic.008G051400.4
Synonym GATA6, Sb08g004340
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
GATA zinc finger domain containing protein, expressed
UniProt A0A1Z5R5Z9 , A0A1Z5R501
Pfam PF00320
Panther DB PTHR10071 PTHR10071:SF200
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G45170 : GATA transcription factor 14
RAP-DB (Rice) LOC_Os12g07120.1 : GATA zinc finger domain containing protein, expressed
MaizeGDB (Corn) Zm00025a025762 , Zm00025a053408 , Zm00025a054028 , Zm00025a054029 , Zm00025a054027 , Zm00025a044324 , Zm00025a037972
Brachypodium KQK05338 , KQK05337
Barley HORVU5Hr1G036330.4 , HORVU5Hr1G036330.5 , HORVU5Hr1G036330.6 , HORVU5Hr1G036330.1 , HORVU5Hr1G036330.2 , HORVU5Hr1G036330.3 , HORVU4Hr1G079070.5 , HORVU4Hr1G079070.4 , HORVU4Hr1G079070.3 , HORVU4Hr1G079070.2 , HORVU4Hr1G079070.1
Wheat TraesCS1B02G234800 , TraesCS4A02G409600 , TraesCS5B02G117700 , TraesCS1A02G221600 , TraesCS5A02G118500
Populus -


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cDNA sequences
Sobic.008G051400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G224300 RING finger protein, putative, expressed -
2 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
3 Sobic.006G099800 signal recognition particle 19 kDa protein, putative, expressed K03105: signal recognition particle subunit SRP19
4 Sobic.007G181600 dehydrogenase, putative, expressed K00008: SORD, L-iditol 2-dehydrogenase
5 Sobic.001G011800 SAM domain containing protein, putative, expressed -
6 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
7 Sobic.001G148700 signal peptidase complex subunit 1, putative, expressed K12946: signal peptidase complex subunit 1
8 Sobic.004G015400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed -
9 Sobic.009G149800 subtilisin N-terminal Region family protein, expressed -
10 Sobic.004G018200 glycine-rich protein 2, putative, expressed -
11 Sobic.006G245000 - -
12 Sobic.004G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
13 Sobic.001G285000 - -
14 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
15 Sobic.010G039000 expressed protein -
16 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
17 Sobic.001G434400 ufm1-conjugating enzyme 1, putative, expressed K12165: ufm1-conjugating enzyme 1
18 Sobic.001G310500 strictosidine synthase, putative, expressed -
19 Sobic.004G174000 expressed protein -
20 Sobic.002G266800 expressed protein K18178: COA5, cytochrome c oxidase assembly factor 5


Gene co-expression network
sample Sobic008G051400 Sobic008G051400 Sobic007G224300 Sobic007G224300 Sobic008G051400--Sobic007G224300 Sobic006G094500 Sobic006G094500 Sobic008G051400--Sobic006G094500 Sobic006G099800 Sobic006G099800 Sobic008G051400--Sobic006G099800 Sobic007G181600 Sobic007G181600 Sobic008G051400--Sobic007G181600 Sobic001G011800 Sobic001G011800 Sobic008G051400--Sobic001G011800 Sobic004G028800 Sobic004G028800 Sobic008G051400--Sobic004G028800 Sobic001G148700 Sobic001G148700 Sobic008G051400--Sobic001G148700 Sobic004G015400 Sobic004G015400 Sobic008G051400--Sobic004G015400 Sobic009G149800 Sobic009G149800 Sobic008G051400--Sobic009G149800 Sobic007G224300--Sobic006G094500 Sobic007G139900 Sobic007G139900 Sobic007G224300--Sobic007G139900 Sobic007G224300--Sobic008G051400 Sobic002G138700 Sobic002G138700 Sobic007G224300--Sobic002G138700 Sobic009G187600 Sobic009G187600 Sobic007G224300--Sobic009G187600 Sobic009G171100 Sobic009G171100 Sobic007G224300--Sobic009G171100 Sobic004G018200 Sobic004G018200 Sobic007G224300--Sobic004G018200 Sobic010G178800 Sobic010G178800 Sobic007G224300--Sobic010G178800 Sobic001G525400 Sobic001G525400 Sobic007G224300--Sobic001G525400 Sobic006G094500--Sobic009G187600 Sobic006G094500--Sobic007G224300 Sobic001G188700 Sobic001G188700 Sobic006G094500--Sobic001G188700 Sobic001G451901 Sobic001G451901 Sobic006G094500--Sobic001G451901 Sobic001G434400 Sobic001G434400 Sobic006G094500--Sobic001G434400 Sobic002G422400 Sobic002G422400 Sobic006G094500--Sobic002G422400 Sobic006G094500--Sobic004G018200 Sobic002G280900 Sobic002G280900 Sobic006G094500--Sobic002G280900 Sobic007G031100 Sobic007G031100 Sobic006G094500--Sobic007G031100 Sobic002G276900 Sobic002G276900 Sobic006G099800--Sobic002G276900 Sobic007G038800 Sobic007G038800 Sobic006G099800--Sobic007G038800 Sobic006G099800--Sobic001G148700 Sobic003G227200 Sobic003G227200 Sobic006G099800--Sobic003G227200 Sobic003G434000 Sobic003G434000 Sobic006G099800--Sobic003G434000 Sobic007G192100 Sobic007G192100 Sobic006G099800--Sobic007G192100 Sobic008G108500 Sobic008G108500 Sobic006G099800--Sobic008G108500 Sobic003G031200 Sobic003G031200 Sobic006G099800--Sobic003G031200 Sobic006G099800--Sobic004G028800 Sobic004G298700 Sobic004G298700 Sobic007G181600--Sobic004G298700 Sobic007G090442 Sobic007G090442 Sobic007G181600--Sobic007G090442 Sobic006G180900 Sobic006G180900 Sobic007G181600--Sobic006G180900 Sobic001G310500 Sobic001G310500 Sobic007G181600--Sobic001G310500 Sobic008G013000 Sobic008G013000 Sobic007G181600--Sobic008G013000 Sobic010G095300 Sobic010G095300 Sobic007G181600--Sobic010G095300 Sobic003G111400 Sobic003G111400 Sobic007G181600--Sobic003G111400 Sobic001G037800 Sobic001G037800 Sobic007G181600--Sobic001G037800 Sobic007G181600--Sobic001G011800 Sobic009G127300 Sobic009G127300 Sobic001G011800--Sobic009G127300 Sobic001G011800--Sobic007G181600 Sobic007G050300 Sobic007G050300 Sobic001G011800--Sobic007G050300 Sobic001G011800--Sobic004G298700 Sobic010G079800 Sobic010G079800 Sobic001G011800--Sobic010G079800 Sobic001G011800--Sobic006G094500 Sobic002G400400 Sobic002G400400 Sobic001G011800--Sobic002G400400 Sobic006G276200 Sobic006G276200 Sobic001G011800--Sobic006G276200 Sobic003G436500 Sobic003G436500 Sobic001G011800--Sobic003G436500 Sobic006G244500 Sobic006G244500 Sobic004G028800--Sobic006G244500 Sobic001G488200 Sobic001G488200 Sobic004G028800--Sobic001G488200 Sobic006G151001 Sobic006G151001 Sobic004G028800--Sobic006G151001 Sobic004G155300 Sobic004G155300 Sobic004G028800--Sobic004G155300 Sobic003G062200 Sobic003G062200 Sobic004G028800--Sobic003G062200 Sobic004G345100 Sobic004G345100 Sobic004G028800--Sobic004G345100 Sobic009G009800 Sobic009G009800 Sobic004G028800--Sobic009G009800 Sobic002G359900 Sobic002G359900 Sobic004G028800--Sobic002G359900 Sobic006G066600 Sobic006G066600 Sobic004G028800--Sobic006G066600 Sobic004G063500 Sobic004G063500 Sobic001G148700--Sobic004G063500 Sobic001G441000 Sobic001G441000 Sobic001G148700--Sobic001G441000 Sobic010G262300 Sobic010G262300 Sobic001G148700--Sobic010G262300 Sobic001G134200 Sobic001G134200 Sobic001G148700--Sobic001G134200 Sobic001G148700--Sobic009G149800 Sobic001G067601 Sobic001G067601 Sobic001G148700--Sobic001G067601 Sobic004G259600 Sobic004G259600 Sobic001G148700--Sobic004G259600 Sobic007G161700 Sobic007G161700 Sobic001G148700--Sobic007G161700 Sobic001G031800 Sobic001G031800 Sobic001G148700--Sobic001G031800 Sobic004G015400--Sobic009G149800 Sobic004G015400--Sobic006G244500 Sobic004G015400--Sobic004G028800 Sobic003G316350 Sobic003G316350 Sobic004G015400--Sobic003G316350 Sobic004G015400--Sobic001G488200 Sobic009G100300 Sobic009G100300 Sobic004G015400--Sobic009G100300 Sobic004G015400--Sobic006G151001 Sobic004G015400--Sobic008G051400 Sobic004G015400--Sobic007G181600 Sobic003G024500 Sobic003G024500 Sobic009G149800--Sobic003G024500 Sobic009G149800--Sobic001G148700 Sobic002G378401 Sobic002G378401 Sobic009G149800--Sobic002G378401 Sobic003G403400 Sobic003G403400 Sobic009G149800--Sobic003G403400 Sobic010G217900 Sobic010G217900 Sobic009G149800--Sobic010G217900 Sobic003G063200 Sobic003G063200 Sobic009G149800--Sobic003G063200 Sobic009G149800--Sobic004G015400 Sobic008G111500 Sobic008G111500 Sobic009G149800--Sobic008G111500 Sobic009G149800--Sobic004G063500
Octagon: transcription factors


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