Gene annotation
Transcriptome id Sobic.006G245000.1
Synonym
Functional annotation -
UniProt A0A1B6PNN4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.006G245000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G066901 - -
2 Sobic.007G181600 dehydrogenase, putative, expressed K00008: SORD, L-iditol 2-dehydrogenase
3 Sobic.004G298700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
4 Sobic.006G180900 ZOS4-11 - C2H2 zinc finger protein, expressed -
5 Sobic.008G051400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@GATA zinc finger domain containing protein, expressed -
6 Sobic.010G079800 expressed protein -
7 Sobic.001G310500 strictosidine synthase, putative, expressed -
8 Sobic.007G140500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
9 Sobic.001G267000 - -
10 Sobic.005G074400 OsPDIL1-1 protein disulfide isomerase PDIL1-1, expressed K09580: PDIA1, protein disulfide-isomerase A1
11 Sobic.003G111400 - -
12 Sobic.006G004300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.001G011800 SAM domain containing protein, putative, expressed -
14 Sobic.002G253400 FAD dependent oxidoreductase domain containing protein, expressed -
15 Sobic.010G075800 - -
16 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
17 Sobic.003G430100 Phosphoesterase family protein(PubMedID : 24906815)@phosphoesterase family protein, putative, expressed K01114: phospholipase C
18 Sobic.009G233700 CobW/P47K family protein, putative, expressed K03189: urease accessory protein
19 Sobic.006G131900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ethylene-responsive protein related, putative, expressed -
20 Sobic.005G117200 - -


Gene co-expression network
sample Sobic006G245000 Sobic006G245000 Sobic002G066901 Sobic002G066901 Sobic006G245000--Sobic002G066901 Sobic007G181600 Sobic007G181600 Sobic006G245000--Sobic007G181600 Sobic004G298700 Sobic004G298700 Sobic006G245000--Sobic004G298700 Sobic006G180900 Sobic006G180900 Sobic006G245000--Sobic006G180900 Sobic008G051400 Sobic008G051400 Sobic006G245000--Sobic008G051400 Sobic010G079800 Sobic010G079800 Sobic006G245000--Sobic010G079800 Sobic001G310500 Sobic001G310500 Sobic006G245000--Sobic001G310500 Sobic007G140500 Sobic007G140500 Sobic006G245000--Sobic007G140500 Sobic001G267000 Sobic001G267000 Sobic006G245000--Sobic001G267000 Sobic002G066901--Sobic006G245000 Sobic002G066901--Sobic001G267000 Sobic009G070300 Sobic009G070300 Sobic002G066901--Sobic009G070300 Sobic005G117200 Sobic005G117200 Sobic002G066901--Sobic005G117200 Sobic005G115400 Sobic005G115400 Sobic002G066901--Sobic005G115400 Sobic005G127900 Sobic005G127900 Sobic002G066901--Sobic005G127900 Sobic002G066901--Sobic010G079800 Sobic001G380200 Sobic001G380200 Sobic002G066901--Sobic001G380200 Sobic005G159801 Sobic005G159801 Sobic002G066901--Sobic005G159801 Sobic007G181600--Sobic004G298700 Sobic007G090442 Sobic007G090442 Sobic007G181600--Sobic007G090442 Sobic007G181600--Sobic006G180900 Sobic007G181600--Sobic001G310500 Sobic008G013000 Sobic008G013000 Sobic007G181600--Sobic008G013000 Sobic010G095300 Sobic010G095300 Sobic007G181600--Sobic010G095300 Sobic003G111400 Sobic003G111400 Sobic007G181600--Sobic003G111400 Sobic001G037800 Sobic001G037800 Sobic007G181600--Sobic001G037800 Sobic001G011800 Sobic001G011800 Sobic007G181600--Sobic001G011800 Sobic004G298700--Sobic007G181600 Sobic004G298700--Sobic001G011800 Sobic004G298700--Sobic006G245000 Sobic002G271600 Sobic002G271600 Sobic004G298700--Sobic002G271600 Sobic004G298700--Sobic006G180900 Sobic004G298700--Sobic008G051400 Sobic009G127300 Sobic009G127300 Sobic004G298700--Sobic009G127300 Sobic005G129000 Sobic005G129000 Sobic004G298700--Sobic005G129000 Sobic005G089000 Sobic005G089000 Sobic004G298700--Sobic005G089000 Sobic004G285400 Sobic004G285400 Sobic006G180900--Sobic004G285400 Sobic006G180900--Sobic007G181600 Sobic006G180900--Sobic001G310500 Sobic006G180900--Sobic008G013000 Sobic006G180900--Sobic006G245000 Sobic002G282900 Sobic002G282900 Sobic006G180900--Sobic002G282900 Sobic007G170400 Sobic007G170400 Sobic006G180900--Sobic007G170400 Sobic006G180900--Sobic005G129000 Sobic004G158300 Sobic004G158300 Sobic006G180900--Sobic004G158300 Sobic007G224300 Sobic007G224300 Sobic008G051400--Sobic007G224300 Sobic006G094500 Sobic006G094500 Sobic008G051400--Sobic006G094500 Sobic006G099800 Sobic006G099800 Sobic008G051400--Sobic006G099800 Sobic008G051400--Sobic007G181600 Sobic008G051400--Sobic001G011800 Sobic004G028800 Sobic004G028800 Sobic008G051400--Sobic004G028800 Sobic001G148700 Sobic001G148700 Sobic008G051400--Sobic001G148700 Sobic004G015400 Sobic004G015400 Sobic008G051400--Sobic004G015400 Sobic009G149800 Sobic009G149800 Sobic008G051400--Sobic009G149800 Sobic001G239100 Sobic001G239100 Sobic010G079800--Sobic001G239100 Sobic007G050300 Sobic007G050300 Sobic010G079800--Sobic007G050300 Sobic001G136500 Sobic001G136500 Sobic010G079800--Sobic001G136500 Sobic004G146200 Sobic004G146200 Sobic010G079800--Sobic004G146200 Sobic007G153700 Sobic007G153700 Sobic010G079800--Sobic007G153700 Sobic007G031100 Sobic007G031100 Sobic010G079800--Sobic007G031100 Sobic001G478700 Sobic001G478700 Sobic010G079800--Sobic001G478700 Sobic004G206300 Sobic004G206300 Sobic010G079800--Sobic004G206300 Sobic001G188700 Sobic001G188700 Sobic010G079800--Sobic001G188700 Sobic001G310500--Sobic006G180900 Sobic001G310500--Sobic007G181600 Sobic005G210100 Sobic005G210100 Sobic001G310500--Sobic005G210100 Sobic001G351300 Sobic001G351300 Sobic001G310500--Sobic001G351300 Sobic001G262000 Sobic001G262000 Sobic001G310500--Sobic001G262000 Sobic001G310500--Sobic005G129000 Sobic001G310500--Sobic002G282900 Sobic001G310500--Sobic007G090442 Sobic001G310500--Sobic010G095300 Sobic005G098700 Sobic005G098700 Sobic007G140500--Sobic005G098700 Sobic004G318400 Sobic004G318400 Sobic007G140500--Sobic004G318400 Sobic005G074400 Sobic005G074400 Sobic007G140500--Sobic005G074400 Sobic004G102900 Sobic004G102900 Sobic007G140500--Sobic004G102900 Sobic005G064200 Sobic005G064200 Sobic007G140500--Sobic005G064200 Sobic001G067000 Sobic001G067000 Sobic007G140500--Sobic001G067000 Sobic001G249200 Sobic001G249200 Sobic007G140500--Sobic001G249200 Sobic009G217300 Sobic009G217300 Sobic007G140500--Sobic009G217300 Sobic002G093900 Sobic002G093900 Sobic007G140500--Sobic002G093900 Sobic003G128550 Sobic003G128550 Sobic001G267000--Sobic003G128550 Sobic001G178800 Sobic001G178800 Sobic001G267000--Sobic001G178800 Sobic001G267000--Sobic009G070300 Sobic001G267000--Sobic005G115400 Sobic001G267000--Sobic005G117200 Sobic009G097900 Sobic009G097900 Sobic001G267000--Sobic009G097900 Sobic001G267000--Sobic002G066901 Sobic001G192250 Sobic001G192250 Sobic001G267000--Sobic001G192250 Sobic009G128000 Sobic009G128000 Sobic001G267000--Sobic009G128000
Octagon: transcription factors


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