Gene annotation
Transcriptome id Sobic.001G434400.1
Synonym Sb01g040860
Functional annotation ufm1-conjugating enzyme 1, putative, expressed
UniProt C5WQV8
Pfam PF08694
Panther DB PTHR12921
NCBI CDD KOG3357; Uncharacterized conserved protein
KEGG Orthology K12165; ufm1-conjugating enzyme 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G27530 : -
RAP-DB (Rice) LOC_Os10g13800.2 : ufm1-conjugating enzyme 1, putative, expressed
MaizeGDB (Corn) Zm00025a001614
Brachypodium KQJ81808
Barley HORVU4Hr1G075950.1 , HORVU4Hr1G075950.2 , HORVU4Hr1G075950.3 , HORVU4Hr1G075950.4 , HORVU4Hr1G075950.5 , HORVU4Hr1G075950.7
Wheat TraesCS4B02G291300 , TraesCS4D02G289900 , TraesCS4A02G013000
Populus -


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cDNA sequences
Sobic.001G434400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G276200 F-box domain containing protein, expressed -
2 Sobic.010G088300 serine/threonine-protein phosphatase 2A activator 2, putative, expressed K17605: PPP2R4, serine/threonine-protein phosphatase 2A activator
3 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
4 Sobic.006G231500 acetyltransferase, GNAT family, putative, expressed K00670: NAA30, N-alpha-acetyltransferase 30
5 Sobic.004G242100 expressed protein -
6 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
7 Sobic.006G109700 UBA and UBX domain-containing protein, putative, expressed K14012: SHP1, UBX1, UBX domain-containing protein 1
8 Sobic.001G130400 expressed protein -
9 Sobic.005G110526 - -
10 Sobic.001G199300 GIL1, putative, expressed -
11 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
12 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
13 Sobic.002G279000 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
14 Sobic.001G148700 signal peptidase complex subunit 1, putative, expressed K12946: signal peptidase complex subunit 1
15 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
16 Sobic.001G408100 Yip1 domain containing protein, expressed -
17 Sobic.003G031200 translation initiation factor SUI1, putative, expressed -
18 Sobic.003G024500 expressed protein -
19 Sobic.001G188700 OST3/OST6 family protein, putative, expressed K12669: OST3, oligosaccharyltransferase complex subunit gamma
20 Sobic.001G398600 anaphase-promoting complex subunit 11, putative, expressed K03358: anaphase-promoting complex subunit 11


Gene co-expression network
sample Sobic001G434400 Sobic001G434400 Sobic006G276200 Sobic006G276200 Sobic001G434400--Sobic006G276200 Sobic010G088300 Sobic010G088300 Sobic001G434400--Sobic010G088300 Sobic004G012800 Sobic004G012800 Sobic001G434400--Sobic004G012800 Sobic006G231500 Sobic006G231500 Sobic001G434400--Sobic006G231500 Sobic004G242100 Sobic004G242100 Sobic001G434400--Sobic004G242100 Sobic004G137900 Sobic004G137900 Sobic001G434400--Sobic004G137900 Sobic006G109700 Sobic006G109700 Sobic001G434400--Sobic006G109700 Sobic001G130400 Sobic001G130400 Sobic001G434400--Sobic001G130400 Sobic005G110526 Sobic005G110526 Sobic001G434400--Sobic005G110526 Sobic006G276200--Sobic001G434400 Sobic001G544100 Sobic001G544100 Sobic006G276200--Sobic001G544100 Sobic006G276200--Sobic010G088300 Sobic002G279000 Sobic002G279000 Sobic006G276200--Sobic002G279000 Sobic006G276200--Sobic004G242100 Sobic001G136500 Sobic001G136500 Sobic006G276200--Sobic001G136500 Sobic003G003000 Sobic003G003000 Sobic006G276200--Sobic003G003000 Sobic001G199300 Sobic001G199300 Sobic006G276200--Sobic001G199300 Sobic007G043600 Sobic007G043600 Sobic006G276200--Sobic007G043600 Sobic003G031200 Sobic003G031200 Sobic010G088300--Sobic003G031200 Sobic003G043400 Sobic003G043400 Sobic010G088300--Sobic003G043400 Sobic010G088300--Sobic001G199300 Sobic010G088300--Sobic001G434400 Sobic002G423800 Sobic002G423800 Sobic010G088300--Sobic002G423800 Sobic010G088300--Sobic004G137900 Sobic004G204800 Sobic004G204800 Sobic010G088300--Sobic004G204800 Sobic002G044000 Sobic002G044000 Sobic010G088300--Sobic002G044000 Sobic003G126800 Sobic003G126800 Sobic010G088300--Sobic003G126800 Sobic004G012800--Sobic004G137900 Sobic004G012800--Sobic006G231500 Sobic006G231700 Sobic006G231700 Sobic004G012800--Sobic006G231700 Sobic009G001900 Sobic009G001900 Sobic004G012800--Sobic009G001900 Sobic002G254650 Sobic002G254650 Sobic004G012800--Sobic002G254650 Sobic005G111100 Sobic005G111100 Sobic004G012800--Sobic005G111100 Sobic003G358300 Sobic003G358300 Sobic004G012800--Sobic003G358300 Sobic006G094600 Sobic006G094600 Sobic004G012800--Sobic006G094600 Sobic001G532100 Sobic001G532100 Sobic004G012800--Sobic001G532100 Sobic003G305100 Sobic003G305100 Sobic006G231500--Sobic003G305100 Sobic009G212300 Sobic009G212300 Sobic006G231500--Sobic009G212300 Sobic006G231500--Sobic009G001900 Sobic004G202100 Sobic004G202100 Sobic006G231500--Sobic004G202100 Sobic006G231500--Sobic004G012800 Sobic006G231500--Sobic006G109700 Sobic007G091000 Sobic007G091000 Sobic006G231500--Sobic007G091000 Sobic002G296200 Sobic002G296200 Sobic006G231500--Sobic002G296200 Sobic001G286300 Sobic001G286300 Sobic006G231500--Sobic001G286300 Sobic001G402600 Sobic001G402600 Sobic004G242100--Sobic001G402600 Sobic004G242100--Sobic003G031200 Sobic003G435000 Sobic003G435000 Sobic004G242100--Sobic003G435000 Sobic004G242100--Sobic001G544100 Sobic006G236500 Sobic006G236500 Sobic004G242100--Sobic006G236500 Sobic009G016500 Sobic009G016500 Sobic004G242100--Sobic009G016500 Sobic004G242100--Sobic004G012800 Sobic007G037000 Sobic007G037000 Sobic004G242100--Sobic007G037000 Sobic004G242100--Sobic001G434400 Sobic004G137900--Sobic004G012800 Sobic004G137900--Sobic006G231700 Sobic004G137900--Sobic003G358300 Sobic006G013900 Sobic006G013900 Sobic004G137900--Sobic006G013900 Sobic002G331300 Sobic002G331300 Sobic004G137900--Sobic002G331300 Sobic004G137900--Sobic001G286300 Sobic009G120100 Sobic009G120100 Sobic004G137900--Sobic009G120100 Sobic003G129800 Sobic003G129800 Sobic004G137900--Sobic003G129800 Sobic004G137900--Sobic005G111100 Sobic008G137600 Sobic008G137600 Sobic006G109700--Sobic008G137600 Sobic001G444300 Sobic001G444300 Sobic006G109700--Sobic001G444300 Sobic006G183000 Sobic006G183000 Sobic006G109700--Sobic006G183000 Sobic001G294900 Sobic001G294900 Sobic006G109700--Sobic001G294900 Sobic009G168000 Sobic009G168000 Sobic006G109700--Sobic009G168000 Sobic006G211800 Sobic006G211800 Sobic006G109700--Sobic006G211800 Sobic006G109700--Sobic006G231500 Sobic004G348900 Sobic004G348900 Sobic006G109700--Sobic004G348900 Sobic001G502200 Sobic001G502200 Sobic006G109700--Sobic001G502200 Sobic004G063500 Sobic004G063500 Sobic001G130400--Sobic004G063500 Sobic001G130400--Sobic009G120100 Sobic001G130400--Sobic004G137900 Sobic001G066700 Sobic001G066700 Sobic001G130400--Sobic001G066700 Sobic001G130400--Sobic003G358300 Sobic001G130400--Sobic005G111100 Sobic009G070200 Sobic009G070200 Sobic001G130400--Sobic009G070200 Sobic003G325700 Sobic003G325700 Sobic001G130400--Sobic003G325700 Sobic001G130400--Sobic001G434400 Sobic001G188700 Sobic001G188700 Sobic005G110526--Sobic001G188700 Sobic001G110300 Sobic001G110300 Sobic005G110526--Sobic001G110300 Sobic005G110526--Sobic001G434400 Sobic008G107900 Sobic008G107900 Sobic005G110526--Sobic008G107900 Sobic001G129400 Sobic001G129400 Sobic005G110526--Sobic001G129400 Sobic010G194200 Sobic010G194200 Sobic005G110526--Sobic010G194200 Sobic003G248300 Sobic003G248300 Sobic005G110526--Sobic003G248300 Sobic004G356300 Sobic004G356300 Sobic005G110526--Sobic004G356300 Sobic004G184000 Sobic004G184000 Sobic005G110526--Sobic004G184000
Octagon: transcription factors


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