Gene annotation
Transcriptome id Sobic.003G024500.1
Synonym Sb03g002350
Functional annotation expressed protein
UniProt C5XL64
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g10880.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G232900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
2 Sobic.009G149800 subtilisin N-terminal Region family protein, expressed -
3 Sobic.005G111100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
4 Sobic.001G286300 - -
5 Sobic.002G296200 expressed protein -
6 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4
7 Sobic.002G387300 expressed protein K17435: large subunit ribosomal protein L54
8 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
9 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
10 Sobic.003G063200 uncharacterized Cys-rich domain containing protein, putative, expressed -
11 Sobic.006G231700 LSM domain containing protein, expressed K12626: U6 snRNA-associated Sm-like protein LSm7
12 Sobic.002G378401 - -
13 Sobic.002G222900 transmembrane protein 50A, putative, expressed -
14 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
15 Sobic.003G403400 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.009G232800 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
17 Sobic.001G304400 expressed protein -
18 Sobic.008G186600 ergosterol biosynthetic protein 28, putative, expressed -
19 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
20 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins


Gene co-expression network
sample Sobic003G024500 Sobic003G024500 Sobic009G232900 Sobic009G232900 Sobic003G024500--Sobic009G232900 Sobic009G149800 Sobic009G149800 Sobic003G024500--Sobic009G149800 Sobic005G111100 Sobic005G111100 Sobic003G024500--Sobic005G111100 Sobic001G286300 Sobic001G286300 Sobic003G024500--Sobic001G286300 Sobic002G296200 Sobic002G296200 Sobic003G024500--Sobic002G296200 Sobic001G128400 Sobic001G128400 Sobic003G024500--Sobic001G128400 Sobic002G387300 Sobic002G387300 Sobic003G024500--Sobic002G387300 Sobic001G066700 Sobic001G066700 Sobic003G024500--Sobic001G066700 Sobic003G358300 Sobic003G358300 Sobic003G024500--Sobic003G358300 Sobic005G168100 Sobic005G168100 Sobic009G232900--Sobic005G168100 Sobic001G432000 Sobic001G432000 Sobic009G232900--Sobic001G432000 Sobic003G150000 Sobic003G150000 Sobic009G232900--Sobic003G150000 Sobic010G204500 Sobic010G204500 Sobic009G232900--Sobic010G204500 Sobic009G232900--Sobic002G296200 Sobic007G134900 Sobic007G134900 Sobic009G232900--Sobic007G134900 Sobic003G063200 Sobic003G063200 Sobic009G232900--Sobic003G063200 Sobic010G251600 Sobic010G251600 Sobic009G232900--Sobic010G251600 Sobic009G232900--Sobic001G128400 Sobic009G149800--Sobic003G024500 Sobic001G148700 Sobic001G148700 Sobic009G149800--Sobic001G148700 Sobic002G378401 Sobic002G378401 Sobic009G149800--Sobic002G378401 Sobic003G403400 Sobic003G403400 Sobic009G149800--Sobic003G403400 Sobic010G217900 Sobic010G217900 Sobic009G149800--Sobic010G217900 Sobic009G149800--Sobic003G063200 Sobic004G015400 Sobic004G015400 Sobic009G149800--Sobic004G015400 Sobic008G111500 Sobic008G111500 Sobic009G149800--Sobic008G111500 Sobic004G063500 Sobic004G063500 Sobic009G149800--Sobic004G063500 Sobic005G111100--Sobic001G128400 Sobic003G129800 Sobic003G129800 Sobic005G111100--Sobic003G129800 Sobic004G032000 Sobic004G032000 Sobic005G111100--Sobic004G032000 Sobic004G066800 Sobic004G066800 Sobic005G111100--Sobic004G066800 Sobic003G280700 Sobic003G280700 Sobic005G111100--Sobic003G280700 Sobic007G152400 Sobic007G152400 Sobic005G111100--Sobic007G152400 Sobic010G054200 Sobic010G054200 Sobic005G111100--Sobic010G054200 Sobic006G231700 Sobic006G231700 Sobic005G111100--Sobic006G231700 Sobic002G218000 Sobic002G218000 Sobic005G111100--Sobic002G218000 Sobic001G286300--Sobic002G296200 Sobic008G094600 Sobic008G094600 Sobic001G286300--Sobic008G094600 Sobic006G013000 Sobic006G013000 Sobic001G286300--Sobic006G013000 Sobic001G286300--Sobic001G128400 Sobic001G286300--Sobic003G129800 Sobic002G309700 Sobic002G309700 Sobic001G286300--Sobic002G309700 Sobic009G001900 Sobic009G001900 Sobic001G286300--Sobic009G001900 Sobic003G296800 Sobic003G296800 Sobic001G286300--Sobic003G296800 Sobic007G161700 Sobic007G161700 Sobic001G286300--Sobic007G161700 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic002G296200--Sobic003G129800 Sobic001G128400--Sobic005G111100 Sobic001G128400--Sobic003G129800 Sobic001G128400--Sobic010G204500 Sobic006G081100 Sobic006G081100 Sobic001G128400--Sobic006G081100 Sobic003G249700 Sobic003G249700 Sobic001G128400--Sobic003G249700 Sobic002G049300 Sobic002G049300 Sobic001G128400--Sobic002G049300 Sobic001G128400--Sobic010G054200 Sobic001G128400--Sobic003G280700 Sobic003G109600 Sobic003G109600 Sobic001G128400--Sobic003G109600 Sobic002G387300--Sobic006G013000 Sobic002G387300--Sobic001G286300 Sobic002G387300--Sobic003G024500 Sobic002G387300--Sobic002G296200 Sobic002G222900 Sobic002G222900 Sobic002G387300--Sobic002G222900 Sobic002G387300--Sobic001G074700 Sobic002G257400 Sobic002G257400 Sobic002G387300--Sobic002G257400 Sobic010G008800 Sobic010G008800 Sobic002G387300--Sobic010G008800 Sobic002G387300--Sobic002G309700 Sobic001G066700--Sobic003G358300 Sobic001G066700--Sobic003G403400 Sobic001G066700--Sobic002G218000 Sobic001G066700--Sobic005G111100 Sobic009G191600 Sobic009G191600 Sobic001G066700--Sobic009G191600 Sobic010G266300 Sobic010G266300 Sobic001G066700--Sobic010G266300 Sobic003G233500 Sobic003G233500 Sobic001G066700--Sobic003G233500 Sobic010G225300 Sobic010G225300 Sobic001G066700--Sobic010G225300 Sobic009G070200 Sobic009G070200 Sobic001G066700--Sobic009G070200 Sobic003G358300--Sobic001G066700 Sobic003G358300--Sobic006G231700 Sobic003G358300--Sobic005G111100 Sobic002G044000 Sobic002G044000 Sobic003G358300--Sobic002G044000 Sobic003G358300--Sobic004G032000 Sobic004G166500 Sobic004G166500 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic009G191200 Sobic009G191200 Sobic003G358300--Sobic009G191200
Octagon: transcription factors


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