Gene annotation
Transcriptome id Sobic.001G418800.1
Synonym Sb01g039410
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
N-acetylglucosaminyltransferase, putative, expressed
UniProt C5WPE2
Pfam PF02485
Panther DB PTHR19297 PTHR19297:SF112
NCBI CDD KOG0799; Branching enzyme
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G15050 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os03g16890.1 : N-acetylglucosaminyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a052750 , Zm00025a001863
Brachypodium KQK22324
Barley HORVU4Hr1G059220.7 , HORVU4Hr1G059220.1 , HORVU4Hr1G059220.2 , HORVU4Hr1G059220.4
Wheat TraesCS4B02G206200 , TraesCS4D02G207000 , TraesCS4A02G098300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
2 Sobic.001G218800 expressed protein -
3 Sobic.002G174900 cysteine desulfurase 1, mitochondrial precursor, putative, expressed K04487: iscS, cysteine desulfurase
4 Sobic.006G028300 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
5 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
6 Sobic.001G151900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF593 domain containing protein, expressed -
7 Sobic.001G222900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
8 Sobic.003G004700 SOUL heme-binding protein, putative, expressed -
9 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
10 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
11 Sobic.004G095300 RNA recognition motif containing protein, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
12 Sobic.003G123000 splicing factor 3 subunit 1, putative, expressed K12825: SF3A1, splicing factor 3A subunit 1
13 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.006G127400 inactive receptor kinase At1g27190 precursor, putative, expressed -
15 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
16 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
17 Sobic.003G368800 expressed protein -
18 Sobic.004G260400 expressed protein K07018: uncharacterized protein
19 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.003G053900 zinc finger, C3HC4 type family protein, expressed -


Gene co-expression network
sample Sobic001G418800 Sobic001G418800 Sobic001G380500 Sobic001G380500 Sobic001G418800--Sobic001G380500 Sobic001G218800 Sobic001G218800 Sobic001G418800--Sobic001G218800 Sobic002G174900 Sobic002G174900 Sobic001G418800--Sobic002G174900 Sobic006G028300 Sobic006G028300 Sobic001G418800--Sobic006G028300 Sobic010G108900 Sobic010G108900 Sobic001G418800--Sobic010G108900 Sobic001G151900 Sobic001G151900 Sobic001G418800--Sobic001G151900 Sobic001G222900 Sobic001G222900 Sobic001G418800--Sobic001G222900 Sobic003G004700 Sobic003G004700 Sobic001G418800--Sobic003G004700 Sobic002G339500 Sobic002G339500 Sobic001G418800--Sobic002G339500 Sobic009G029700 Sobic009G029700 Sobic001G380500--Sobic009G029700 Sobic001G380500--Sobic010G108900 Sobic007G168200 Sobic007G168200 Sobic001G380500--Sobic007G168200 Sobic007G029100 Sobic007G029100 Sobic001G380500--Sobic007G029100 Sobic001G380500--Sobic001G218800 Sobic002G039000 Sobic002G039000 Sobic001G380500--Sobic002G039000 Sobic006G168400 Sobic006G168400 Sobic001G380500--Sobic006G168400 Sobic001G380500--Sobic001G418800 Sobic002G404200 Sobic002G404200 Sobic001G380500--Sobic002G404200 Sobic001G218800--Sobic010G108900 Sobic001G218800--Sobic003G004700 Sobic010G176500 Sobic010G176500 Sobic001G218800--Sobic010G176500 Sobic003G123000 Sobic003G123000 Sobic001G218800--Sobic003G123000 Sobic010G000300 Sobic010G000300 Sobic001G218800--Sobic010G000300 Sobic001G218800--Sobic001G380500 Sobic006G087100 Sobic006G087100 Sobic001G218800--Sobic006G087100 Sobic006G233300 Sobic006G233300 Sobic001G218800--Sobic006G233300 Sobic009G108500 Sobic009G108500 Sobic001G218800--Sobic009G108500 Sobic009G094800 Sobic009G094800 Sobic002G174900--Sobic009G094800 Sobic003G368800 Sobic003G368800 Sobic002G174900--Sobic003G368800 Sobic003G308700 Sobic003G308700 Sobic002G174900--Sobic003G308700 Sobic002G040800 Sobic002G040800 Sobic002G174900--Sobic002G040800 Sobic008G165700 Sobic008G165700 Sobic002G174900--Sobic008G165700 Sobic001G377000 Sobic001G377000 Sobic002G174900--Sobic001G377000 Sobic006G171700 Sobic006G171700 Sobic002G174900--Sobic006G171700 Sobic007G148200 Sobic007G148200 Sobic002G174900--Sobic007G148200 Sobic001G279200 Sobic001G279200 Sobic002G174900--Sobic001G279200 Sobic007G115200 Sobic007G115200 Sobic006G028300--Sobic007G115200 Sobic004G021200 Sobic004G021200 Sobic006G028300--Sobic004G021200 Sobic009G232700 Sobic009G232700 Sobic006G028300--Sobic009G232700 Sobic006G273200 Sobic006G273200 Sobic006G028300--Sobic006G273200 Sobic010G280100 Sobic010G280100 Sobic006G028300--Sobic010G280100 Sobic002G092300 Sobic002G092300 Sobic006G028300--Sobic002G092300 Sobic002G399100 Sobic002G399100 Sobic006G028300--Sobic002G399100 Sobic010G268300 Sobic010G268300 Sobic006G028300--Sobic010G268300 Sobic008G103200 Sobic008G103200 Sobic006G028300--Sobic008G103200 Sobic010G108900--Sobic001G380500 Sobic010G108900--Sobic001G218800 Sobic010G108900--Sobic006G168400 Sobic010G108900--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic010G108900--Sobic006G183000 Sobic001G469200 Sobic001G469200 Sobic010G108900--Sobic001G469200 Sobic002G262000 Sobic002G262000 Sobic010G108900--Sobic002G262000 Sobic010G108900--Sobic009G108500 Sobic006G109700 Sobic006G109700 Sobic010G108900--Sobic006G109700 Sobic001G151900--Sobic001G222900 Sobic001G151900--Sobic001G418800 Sobic005G007700 Sobic005G007700 Sobic001G151900--Sobic005G007700 Sobic003G000150 Sobic003G000150 Sobic001G151900--Sobic003G000150 Sobic009G080200 Sobic009G080200 Sobic001G151900--Sobic009G080200 Sobic003G264901 Sobic003G264901 Sobic001G151900--Sobic003G264901 Sobic001G151900--Sobic001G279200 Sobic010G000700 Sobic010G000700 Sobic001G151900--Sobic010G000700 Sobic001G151900--Sobic002G174900 Sobic001G108900 Sobic001G108900 Sobic001G222900--Sobic001G108900 Sobic001G222900--Sobic003G123000 Sobic001G222900--Sobic005G007700 Sobic004G246700 Sobic004G246700 Sobic001G222900--Sobic004G246700 Sobic005G079800 Sobic005G079800 Sobic001G222900--Sobic005G079800 Sobic008G165100 Sobic008G165100 Sobic001G222900--Sobic008G165100 Sobic002G309800 Sobic002G309800 Sobic001G222900--Sobic002G309800 Sobic002G224700 Sobic002G224700 Sobic001G222900--Sobic002G224700 Sobic004G095300 Sobic004G095300 Sobic001G222900--Sobic004G095300 Sobic003G004700--Sobic001G218800 Sobic003G004700--Sobic010G108900 Sobic003G004700--Sobic010G176500 Sobic003G004700--Sobic001G380500 Sobic003G004700--Sobic009G108500 Sobic003G004700--Sobic006G109700 Sobic003G004700--Sobic002G039000 Sobic001G263000 Sobic001G263000 Sobic003G004700--Sobic001G263000 Sobic003G004700--Sobic006G087100 Sobic001G427500 Sobic001G427500 Sobic002G339500--Sobic001G427500 Sobic001G120300 Sobic001G120300 Sobic002G339500--Sobic001G120300 Sobic002G339500--Sobic002G092300 Sobic002G193400 Sobic002G193400 Sobic002G339500--Sobic002G193400 Sobic001G057200 Sobic001G057200 Sobic002G339500--Sobic001G057200 Sobic004G202700 Sobic004G202700 Sobic002G339500--Sobic004G202700 Sobic010G123400 Sobic010G123400 Sobic002G339500--Sobic010G123400 Sobic006G244700 Sobic006G244700 Sobic002G339500--Sobic006G244700 Sobic010G084000 Sobic010G084000 Sobic002G339500--Sobic010G084000
Octagon: transcription factors


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