Gene annotation
Transcriptome id Sobic.002G339500.1
Synonym SPHK1, Sb02g036410
Functional annotation diacylglycerol kinase, putative, expressed
UniProt C5XBK4
Pfam PF00781
Panther DB PTHR12358 PTHR12358:SF42
NCBI CDD -
KEGG Orthology K04718; sphingosine kinase
Gene Ontology GO:0016301; kinase activity


Orthologs (automatic annotation)
TAIR AT4G21540 : sphingosine kinase 1
RAP-DB (Rice) LOC_Os07g37580.1 : diacylglycerol kinase, putative, expressed
MaizeGDB (Corn) Zm00025a048391 , Zm00025a014910
Brachypodium KQK15760 , PNT74939 , PNT74938
Barley HORVU2Hr1G040610.1 , HORVU2Hr1G040610.3 , HORVU2Hr1G040640.6 , HORVU2Hr1G040640.4 , HORVU2Hr1G040610.2 , HORVU2Hr1G040640.3
Wheat TraesCS2B02G231900 , TraesCS2D02G211500 , TraesCS2A02G204400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
2 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
3 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
4 Sobic.002G193400 lipase, putative, expressed K18875: enhanced disease susceptibility 1 protein
5 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
6 Sobic.004G202700 expressed protein K10268: F-box and leucine-rich repeat protein 2/20
7 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
8 Sobic.006G244700 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor, putative, expressed K00794: ribH, 6,7-dimethyl-8-ribityllumazine synthase
9 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
10 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.005G064800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
12 Sobic.006G222100 dehydrogenase, putative, expressed -
13 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
14 Sobic.010G113000 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
15 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.001G427200 josephin, putative, expressed K15235: josephin
17 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
18 Sobic.001G263000 membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.001G418800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
20 Sobic.002G251700 no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic002G339500 Sobic002G339500 Sobic001G427500 Sobic001G427500 Sobic002G339500--Sobic001G427500 Sobic001G120300 Sobic001G120300 Sobic002G339500--Sobic001G120300 Sobic002G092300 Sobic002G092300 Sobic002G339500--Sobic002G092300 Sobic002G193400 Sobic002G193400 Sobic002G339500--Sobic002G193400 Sobic001G057200 Sobic001G057200 Sobic002G339500--Sobic001G057200 Sobic004G202700 Sobic004G202700 Sobic002G339500--Sobic004G202700 Sobic010G123400 Sobic010G123400 Sobic002G339500--Sobic010G123400 Sobic006G244700 Sobic006G244700 Sobic002G339500--Sobic006G244700 Sobic010G084000 Sobic010G084000 Sobic002G339500--Sobic010G084000 Sobic001G427500--Sobic002G339500 Sobic001G427500--Sobic002G193400 Sobic004G227300 Sobic004G227300 Sobic001G427500--Sobic004G227300 Sobic006G004600 Sobic006G004600 Sobic001G427500--Sobic006G004600 Sobic007G062500 Sobic007G062500 Sobic001G427500--Sobic007G062500 Sobic001G417900 Sobic001G417900 Sobic001G427500--Sobic001G417900 Sobic009G017400 Sobic009G017400 Sobic001G427500--Sobic009G017400 Sobic001G261597 Sobic001G261597 Sobic001G427500--Sobic001G261597 Sobic001G022600 Sobic001G022600 Sobic001G427500--Sobic001G022600 Sobic003G354400 Sobic003G354400 Sobic001G120300--Sobic003G354400 Sobic001G394600 Sobic001G394600 Sobic001G120300--Sobic001G394600 Sobic004G127700 Sobic004G127700 Sobic001G120300--Sobic004G127700 Sobic001G120300--Sobic010G084000 Sobic001G123000 Sobic001G123000 Sobic001G120300--Sobic001G123000 Sobic010G205800 Sobic010G205800 Sobic001G120300--Sobic010G205800 Sobic001G000200 Sobic001G000200 Sobic001G120300--Sobic001G000200 Sobic004G183600 Sobic004G183600 Sobic001G120300--Sobic004G183600 Sobic001G120300--Sobic002G092300 Sobic010G279700 Sobic010G279700 Sobic002G092300--Sobic010G279700 Sobic004G250300 Sobic004G250300 Sobic002G092300--Sobic004G250300 Sobic004G021200 Sobic004G021200 Sobic002G092300--Sobic004G021200 Sobic007G115200 Sobic007G115200 Sobic002G092300--Sobic007G115200 Sobic008G092300 Sobic008G092300 Sobic002G092300--Sobic008G092300 Sobic001G281600 Sobic001G281600 Sobic002G092300--Sobic001G281600 Sobic002G092300--Sobic001G000200 Sobic003G250500 Sobic003G250500 Sobic002G092300--Sobic003G250500 Sobic001G016000 Sobic001G016000 Sobic002G092300--Sobic001G016000 Sobic002G193400--Sobic001G427500 Sobic002G193400--Sobic001G022600 Sobic002G193400--Sobic002G339500 Sobic003G402200 Sobic003G402200 Sobic002G193400--Sobic003G402200 Sobic006G127400 Sobic006G127400 Sobic002G193400--Sobic006G127400 Sobic009G190800 Sobic009G190800 Sobic002G193400--Sobic009G190800 Sobic005G072200 Sobic005G072200 Sobic002G193400--Sobic005G072200 Sobic001G075000 Sobic001G075000 Sobic002G193400--Sobic001G075000 Sobic006G052200 Sobic006G052200 Sobic002G193400--Sobic006G052200 Sobic010G146600 Sobic010G146600 Sobic001G057200--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic001G057200--Sobic002G317300 Sobic001G057200--Sobic002G092300 Sobic010G249300 Sobic010G249300 Sobic001G057200--Sobic010G249300 Sobic003G372000 Sobic003G372000 Sobic001G057200--Sobic003G372000 Sobic006G047100 Sobic006G047100 Sobic001G057200--Sobic006G047100 Sobic005G044800 Sobic005G044800 Sobic001G057200--Sobic005G044800 Sobic002G143000 Sobic002G143000 Sobic001G057200--Sobic002G143000 Sobic006G264500 Sobic006G264500 Sobic001G057200--Sobic006G264500 Sobic005G064800 Sobic005G064800 Sobic004G202700--Sobic005G064800 Sobic004G202700--Sobic002G339500 Sobic002G281800 Sobic002G281800 Sobic004G202700--Sobic002G281800 Sobic004G028000 Sobic004G028000 Sobic004G202700--Sobic004G028000 Sobic007G029100 Sobic007G029100 Sobic004G202700--Sobic007G029100 Sobic004G202700--Sobic001G427500 Sobic010G265800 Sobic010G265800 Sobic004G202700--Sobic010G265800 Sobic004G202700--Sobic006G004600 Sobic001G004700 Sobic001G004700 Sobic004G202700--Sobic001G004700 Sobic003G273600 Sobic003G273600 Sobic010G123400--Sobic003G273600 Sobic002G166300 Sobic002G166300 Sobic010G123400--Sobic002G166300 Sobic003G376400 Sobic003G376400 Sobic010G123400--Sobic003G376400 Sobic010G123400--Sobic002G339500 Sobic006G222100 Sobic006G222100 Sobic010G123400--Sobic006G222100 Sobic003G233600 Sobic003G233600 Sobic010G123400--Sobic003G233600 Sobic010G123400--Sobic009G017400 Sobic001G079200 Sobic001G079200 Sobic010G123400--Sobic001G079200 Sobic010G123400--Sobic010G084000 Sobic001G263000 Sobic001G263000 Sobic006G244700--Sobic001G263000 Sobic001G048200 Sobic001G048200 Sobic006G244700--Sobic001G048200 Sobic006G244700--Sobic005G044800 Sobic007G188300 Sobic007G188300 Sobic006G244700--Sobic007G188300 Sobic004G130900 Sobic004G130900 Sobic006G244700--Sobic004G130900 Sobic009G004600 Sobic009G004600 Sobic006G244700--Sobic009G004600 Sobic003G261400 Sobic003G261400 Sobic006G244700--Sobic003G261400 Sobic002G209400 Sobic002G209400 Sobic006G244700--Sobic002G209400 Sobic004G081800 Sobic004G081800 Sobic006G244700--Sobic004G081800 Sobic010G084000--Sobic001G120300 Sobic010G256800 Sobic010G256800 Sobic010G084000--Sobic010G256800 Sobic003G370200 Sobic003G370200 Sobic010G084000--Sobic003G370200 Sobic010G021000 Sobic010G021000 Sobic010G084000--Sobic010G021000 Sobic010G019800 Sobic010G019800 Sobic010G084000--Sobic010G019800 Sobic002G301500 Sobic002G301500 Sobic010G084000--Sobic002G301500 Sobic008G133400 Sobic008G133400 Sobic010G084000--Sobic008G133400 Sobic010G106900 Sobic010G106900 Sobic010G084000--Sobic010G106900 Sobic010G084000--Sobic001G057200
Octagon: transcription factors


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