Gene annotation
Transcriptome id Sobic.005G129400.1
Synonym Sb05g019070
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Y2V8
Pfam -
Panther DB PTHR31762 PTHR31762:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48860 : -
RAP-DB (Rice) LOC_Os11g31950.1 : expressed protein
MaizeGDB (Corn) Zm00025a029802
Brachypodium KQJ88434
Barley HORVU4Hr1G023390.9 , HORVU4Hr1G023390.8 , HORVU4Hr1G023390.3 , HORVU4Hr1G023390.2 , HORVU4Hr1G023390.5 , HORVU4Hr1G023390.4 , HORVU4Hr1G023390.7 , HORVU4Hr1G023390.6 , HORVU4Hr1G023390.19 , HORVU4Hr1G023390.18 , HORVU4Hr1G023390.15 , HORVU4Hr1G023390.14 , HORVU4Hr1G023390.17 , HORVU4Hr1G023390.11 , HORVU4Hr1G023390.10 , HORVU4Hr1G023390.13 , HORVU4Hr1G023390.12
Wheat TraesCS4A02G192600 , TraesCS4D02G120700 , TraesCS4B02G122700
Populus -


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cDNA sequences
Sobic.005G129400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G152600 - -
2 Sobic.004G275200 zinc-binding protein, putative, expressed -
3 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
4 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
5 Sobic.008G001400 expressed protein -
6 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.007G148200 auxin-repressed protein, putative, expressed -
8 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
9 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
10 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
11 Sobic.008G073900 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
12 Sobic.002G251700 no apical meristem protein, putative, expressed -
13 Sobic.010G009400 G-protein alpha subunit, putative, expressed -
14 Sobic.005G229400 GRAS family transcription factor domain containing protein, expressed -
15 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
16 Sobic.005G091600 aquaporin protein, putative, expressed K09875: aquaporin SIP
17 Sobic.007G120401 - -
18 Sobic.010G019800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
19 Sobic.003G000150 - -
20 Sobic.001G045000 CAMK_CAMK_like.24 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic005G129400 Sobic005G129400 Sobic006G152600 Sobic006G152600 Sobic005G129400--Sobic006G152600 Sobic004G275200 Sobic004G275200 Sobic005G129400--Sobic004G275200 Sobic001G123000 Sobic001G123000 Sobic005G129400--Sobic001G123000 Sobic002G130700 Sobic002G130700 Sobic005G129400--Sobic002G130700 Sobic008G001400 Sobic008G001400 Sobic005G129400--Sobic008G001400 Sobic009G245700 Sobic009G245700 Sobic005G129400--Sobic009G245700 Sobic007G148200 Sobic007G148200 Sobic005G129400--Sobic007G148200 Sobic001G427500 Sobic001G427500 Sobic005G129400--Sobic001G427500 Sobic010G084000 Sobic010G084000 Sobic005G129400--Sobic010G084000 Sobic006G152600--Sobic004G275200 Sobic006G152600--Sobic007G148200 Sobic006G152600--Sobic005G129400 Sobic002G226000 Sobic002G226000 Sobic006G152600--Sobic002G226000 Sobic004G153600 Sobic004G153600 Sobic006G152600--Sobic004G153600 Sobic008G094700 Sobic008G094700 Sobic006G152600--Sobic008G094700 Sobic002G020800 Sobic002G020800 Sobic006G152600--Sobic002G020800 Sobic001G465100 Sobic001G465100 Sobic006G152600--Sobic001G465100 Sobic007G154701 Sobic007G154701 Sobic006G152600--Sobic007G154701 Sobic004G275200--Sobic006G152600 Sobic004G275200--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic004G275200--Sobic001G293800 Sobic004G275200--Sobic008G094700 Sobic004G275200--Sobic002G130700 Sobic003G308700 Sobic003G308700 Sobic004G275200--Sobic003G308700 Sobic001G377000 Sobic001G377000 Sobic004G275200--Sobic001G377000 Sobic004G275200--Sobic005G129400 Sobic009G080200 Sobic009G080200 Sobic004G275200--Sobic009G080200 Sobic007G007000 Sobic007G007000 Sobic001G123000--Sobic007G007000 Sobic009G259400 Sobic009G259400 Sobic001G123000--Sobic009G259400 Sobic003G344900 Sobic003G344900 Sobic001G123000--Sobic003G344900 Sobic001G120300 Sobic001G120300 Sobic001G123000--Sobic001G120300 Sobic001G098200 Sobic001G098200 Sobic001G123000--Sobic001G098200 Sobic010G090900 Sobic010G090900 Sobic001G123000--Sobic010G090900 Sobic006G114500 Sobic006G114500 Sobic001G123000--Sobic006G114500 Sobic005G091600 Sobic005G091600 Sobic001G123000--Sobic005G091600 Sobic007G177000 Sobic007G177000 Sobic001G123000--Sobic007G177000 Sobic009G034800 Sobic009G034800 Sobic002G130700--Sobic009G034800 Sobic002G130700--Sobic004G275200 Sobic002G130700--Sobic005G129400 Sobic004G174100 Sobic004G174100 Sobic002G130700--Sobic004G174100 Sobic006G242000 Sobic006G242000 Sobic002G130700--Sobic006G242000 Sobic002G027700 Sobic002G027700 Sobic002G130700--Sobic002G027700 Sobic002G130700--Sobic009G245700 Sobic001G427200 Sobic001G427200 Sobic002G130700--Sobic001G427200 Sobic002G241400 Sobic002G241400 Sobic002G130700--Sobic002G241400 Sobic002G040800 Sobic002G040800 Sobic008G001400--Sobic002G040800 Sobic010G113000 Sobic010G113000 Sobic008G001400--Sobic010G113000 Sobic008G001400--Sobic005G129400 Sobic004G175200 Sobic004G175200 Sobic008G001400--Sobic004G175200 Sobic007G120401 Sobic007G120401 Sobic008G001400--Sobic007G120401 Sobic002G273700 Sobic002G273700 Sobic008G001400--Sobic002G273700 Sobic002G174900 Sobic002G174900 Sobic008G001400--Sobic002G174900 Sobic003G206800 Sobic003G206800 Sobic008G001400--Sobic003G206800 Sobic009G082200 Sobic009G082200 Sobic008G001400--Sobic009G082200 Sobic003G264901 Sobic003G264901 Sobic009G245700--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic009G245700--Sobic006G053700 Sobic009G245700--Sobic001G293800 Sobic004G096300 Sobic004G096300 Sobic009G245700--Sobic004G096300 Sobic009G245700--Sobic004G275200 Sobic009G245700--Sobic005G129400 Sobic009G245700--Sobic007G148200 Sobic004G349300 Sobic004G349300 Sobic009G245700--Sobic004G349300 Sobic009G245700--Sobic002G130700 Sobic007G148200--Sobic001G377000 Sobic007G148200--Sobic004G275200 Sobic007G148200--Sobic002G226000 Sobic007G148200--Sobic006G152600 Sobic007G148200--Sobic001G293800 Sobic007G148200--Sobic007G120401 Sobic004G153400 Sobic004G153400 Sobic007G148200--Sobic004G153400 Sobic002G046800 Sobic002G046800 Sobic007G148200--Sobic002G046800 Sobic004G153501 Sobic004G153501 Sobic007G148200--Sobic004G153501 Sobic002G339500 Sobic002G339500 Sobic001G427500--Sobic002G339500 Sobic002G193400 Sobic002G193400 Sobic001G427500--Sobic002G193400 Sobic004G227300 Sobic004G227300 Sobic001G427500--Sobic004G227300 Sobic006G004600 Sobic006G004600 Sobic001G427500--Sobic006G004600 Sobic007G062500 Sobic007G062500 Sobic001G427500--Sobic007G062500 Sobic001G417900 Sobic001G417900 Sobic001G427500--Sobic001G417900 Sobic009G017400 Sobic009G017400 Sobic001G427500--Sobic009G017400 Sobic001G261597 Sobic001G261597 Sobic001G427500--Sobic001G261597 Sobic001G022600 Sobic001G022600 Sobic001G427500--Sobic001G022600 Sobic010G084000--Sobic001G120300 Sobic010G256800 Sobic010G256800 Sobic010G084000--Sobic010G256800 Sobic003G370200 Sobic003G370200 Sobic010G084000--Sobic003G370200 Sobic010G021000 Sobic010G021000 Sobic010G084000--Sobic010G021000 Sobic010G019800 Sobic010G019800 Sobic010G084000--Sobic010G019800 Sobic002G301500 Sobic002G301500 Sobic010G084000--Sobic002G301500 Sobic008G133400 Sobic008G133400 Sobic010G084000--Sobic008G133400 Sobic010G106900 Sobic010G106900 Sobic010G084000--Sobic010G106900 Sobic001G057200 Sobic001G057200 Sobic010G084000--Sobic001G057200
Octagon: transcription factors


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