Gene annotation
Transcriptome id Sobic.010G084000.1,Sobic.010G084000.2
Synonym Sb10g007280
Functional annotation OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed
UniProt A0A194YI04 , A0A194YJ18
Pfam PF12695 PF00326
Panther DB PTHR11731 PTHR11731:SF126
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G36210 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g11190.1 : OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a049546
Brachypodium PNT77602 , KQK22191
Barley HORVU7Hr1G036000.1 , HORVU7Hr1G036000.2 , HORVU7Hr1G036000.3 , HORVU7Hr1G036000.4 , HORVU7Hr1G036000.5 , HORVU7Hr1G036000.6 , HORVU7Hr1G036000.7 , HORVU7Hr1G036000.8 , HORVU7Hr1G036000.9 , HORVU7Hr1G036000.18 , HORVU7Hr1G036000.19 , HORVU7Hr1G036000.12 , HORVU7Hr1G036000.13 , HORVU7Hr1G036000.10 , HORVU7Hr1G036000.11 , HORVU7Hr1G036000.16 , HORVU7Hr1G036000.17 , HORVU7Hr1G036000.14 , HORVU7Hr1G036000.15
Wheat TraesCS7D02G174900 , TraesCS4B02G384400 , TraesCS4B02G384400 , TraesCS4B02G384400 , TraesCS7A02G173500 , TraesCS7B02G078700
Populus -


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cDNA sequences
Sobic.010G084000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
2 Sobic.010G256800 - -
3 Sobic.003G370200 ion channel DMI1, chloroplast precursor, putative, expressed -
4 Sobic.010G021000 expressed protein -
5 Sobic.010G019800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.002G301500 amidase, putative, expressed K01426: E3.5.1.4, amidase
7 Sobic.008G133400 unc-93 homolog A, putative, expressed -
8 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
9 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
10 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
11 Sobic.001G394600 expressed protein -
12 Sobic.005G129400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
15 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
16 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
17 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
18 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
19 Sobic.001G275900 calcium-transporting ATPase, plasma membrane-type, putative, expressed -
20 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G084000 Sobic010G084000 Sobic001G120300 Sobic001G120300 Sobic010G084000--Sobic001G120300 Sobic010G256800 Sobic010G256800 Sobic010G084000--Sobic010G256800 Sobic003G370200 Sobic003G370200 Sobic010G084000--Sobic003G370200 Sobic010G021000 Sobic010G021000 Sobic010G084000--Sobic010G021000 Sobic010G019800 Sobic010G019800 Sobic010G084000--Sobic010G019800 Sobic002G301500 Sobic002G301500 Sobic010G084000--Sobic002G301500 Sobic008G133400 Sobic008G133400 Sobic010G084000--Sobic008G133400 Sobic010G106900 Sobic010G106900 Sobic010G084000--Sobic010G106900 Sobic001G057200 Sobic001G057200 Sobic010G084000--Sobic001G057200 Sobic003G354400 Sobic003G354400 Sobic001G120300--Sobic003G354400 Sobic001G394600 Sobic001G394600 Sobic001G120300--Sobic001G394600 Sobic004G127700 Sobic004G127700 Sobic001G120300--Sobic004G127700 Sobic001G120300--Sobic010G084000 Sobic001G123000 Sobic001G123000 Sobic001G120300--Sobic001G123000 Sobic010G205800 Sobic010G205800 Sobic001G120300--Sobic010G205800 Sobic001G000200 Sobic001G000200 Sobic001G120300--Sobic001G000200 Sobic004G183600 Sobic004G183600 Sobic001G120300--Sobic004G183600 Sobic002G092300 Sobic002G092300 Sobic001G120300--Sobic002G092300 Sobic010G256800--Sobic002G301500 Sobic010G256800--Sobic010G021000 Sobic010G256800--Sobic008G133400 Sobic010G256800--Sobic010G084000 Sobic001G017600 Sobic001G017600 Sobic010G256800--Sobic001G017600 Sobic010G256932 Sobic010G256932 Sobic010G256800--Sobic010G256932 Sobic010G256800--Sobic003G370200 Sobic008G083000 Sobic008G083000 Sobic010G256800--Sobic008G083000 Sobic009G178300 Sobic009G178300 Sobic010G256800--Sobic009G178300 Sobic003G370200--Sobic010G256800 Sobic003G370200--Sobic010G084000 Sobic006G237400 Sobic006G237400 Sobic003G370200--Sobic006G237400 Sobic003G126600 Sobic003G126600 Sobic003G370200--Sobic003G126600 Sobic003G370200--Sobic008G133400 Sobic003G370200--Sobic010G106900 Sobic003G370200--Sobic001G000200 Sobic009G257800 Sobic009G257800 Sobic003G370200--Sobic009G257800 Sobic001G235900 Sobic001G235900 Sobic003G370200--Sobic001G235900 Sobic010G021000--Sobic010G256932 Sobic010G021000--Sobic010G256800 Sobic010G021000--Sobic002G301500 Sobic010G021000--Sobic009G178300 Sobic010G021000--Sobic008G133400 Sobic010G021000--Sobic010G084000 Sobic007G031800 Sobic007G031800 Sobic010G021000--Sobic007G031800 Sobic010G021000--Sobic001G017600 Sobic003G142700 Sobic003G142700 Sobic010G021000--Sobic003G142700 Sobic010G019800--Sobic010G084000 Sobic010G019800--Sobic010G256800 Sobic010G019800--Sobic002G301500 Sobic005G129400 Sobic005G129400 Sobic010G019800--Sobic005G129400 Sobic010G019800--Sobic010G021000 Sobic010G123400 Sobic010G123400 Sobic010G019800--Sobic010G123400 Sobic010G019800--Sobic001G057200 Sobic010G019800--Sobic001G123000 Sobic001G540100 Sobic001G540100 Sobic010G019800--Sobic001G540100 Sobic002G301500--Sobic010G256800 Sobic002G301500--Sobic010G021000 Sobic002G301500--Sobic010G256932 Sobic001G389800 Sobic001G389800 Sobic002G301500--Sobic001G389800 Sobic002G301500--Sobic010G106900 Sobic002G301500--Sobic010G084000 Sobic001G366800 Sobic001G366800 Sobic002G301500--Sobic001G366800 Sobic010G249300 Sobic010G249300 Sobic002G301500--Sobic010G249300 Sobic007G203500 Sobic007G203500 Sobic002G301500--Sobic007G203500 Sobic008G133400--Sobic001G017600 Sobic008G133400--Sobic010G256800 Sobic008G133400--Sobic009G257800 Sobic009G062900 Sobic009G062900 Sobic008G133400--Sobic009G062900 Sobic009G040700 Sobic009G040700 Sobic008G133400--Sobic009G040700 Sobic008G133400--Sobic008G083000 Sobic005G084100 Sobic005G084100 Sobic008G133400--Sobic005G084100 Sobic004G057400 Sobic004G057400 Sobic008G133400--Sobic004G057400 Sobic004G325400 Sobic004G325400 Sobic008G133400--Sobic004G325400 Sobic010G147833 Sobic010G147833 Sobic010G106900--Sobic010G147833 Sobic010G106900--Sobic003G126600 Sobic002G260900 Sobic002G260900 Sobic010G106900--Sobic002G260900 Sobic010G106900--Sobic001G017600 Sobic010G106900--Sobic008G133400 Sobic010G106900--Sobic008G083000 Sobic010G106900--Sobic007G203500 Sobic002G392700 Sobic002G392700 Sobic010G106900--Sobic002G392700 Sobic010G106900--Sobic002G301500 Sobic010G146600 Sobic010G146600 Sobic001G057200--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic001G057200--Sobic002G317300 Sobic001G057200--Sobic002G092300 Sobic001G057200--Sobic010G249300 Sobic003G372000 Sobic003G372000 Sobic001G057200--Sobic003G372000 Sobic006G047100 Sobic006G047100 Sobic001G057200--Sobic006G047100 Sobic005G044800 Sobic005G044800 Sobic001G057200--Sobic005G044800 Sobic002G143000 Sobic002G143000 Sobic001G057200--Sobic002G143000 Sobic006G264500 Sobic006G264500 Sobic001G057200--Sobic006G264500
Octagon: transcription factors


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