Gene annotation
Transcriptome id Sobic.003G370200.2,Sobic.003G370200.1
Synonym Sb03g041120
Functional annotation ion channel DMI1, chloroplast precursor, putative, expressed
UniProt A0A1B6Q769 , A0A1B6Q767
Pfam PF06241
Panther DB PTHR31563 PTHR31563:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G49960 : -
RAP-DB (Rice) LOC_Os01g64980.1,LOC_Os01g64980.2 : ion channel DMI1, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a026660
Brachypodium KQK10801 , PNT73270 , PNT73269
Barley HORVU3Hr1G082670.4 , HORVU3Hr1G082670.5 , HORVU3Hr1G082670.6 , HORVU3Hr1G082670.7 , HORVU3Hr1G082670.2 , HORVU3Hr1G082670.3 , HORVU3Hr1G082670.11 , HORVU3Hr1G082670.8 , HORVU3Hr1G082670.9 , HORVU3Hr1G082670.12 , HORVU3Hr1G082670.10
Wheat TraesCS3B02G413900 , TraesCS3D02G374400 , TraesCS3A02G381200 , TraesCS3A02G381200 , TraesCS3A02G381200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G256800 - -
2 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
3 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
4 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
5 Sobic.008G133400 unc-93 homolog A, putative, expressed -
6 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
7 Sobic.001G000200 TBC domain containing protein, expressed -
8 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
9 Sobic.001G235900 white-brown complex homolog protein, putative, expressed -
10 Sobic.004G158700 copine, putative, expressed -
11 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
12 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
13 Sobic.003G313400 expressed protein -
14 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
15 Sobic.001G253700 protein kinase domain containing protein, expressed K04733: interleukin-1 receptor-associated kinase 4
16 Sobic.001G193000 STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
17 Sobic.009G042700 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
18 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
19 Sobic.008G002000 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
20 Sobic.002G092300 WD domain, G-beta repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic003G370200 Sobic003G370200 Sobic010G256800 Sobic010G256800 Sobic003G370200--Sobic010G256800 Sobic010G084000 Sobic010G084000 Sobic003G370200--Sobic010G084000 Sobic006G237400 Sobic006G237400 Sobic003G370200--Sobic006G237400 Sobic003G126600 Sobic003G126600 Sobic003G370200--Sobic003G126600 Sobic008G133400 Sobic008G133400 Sobic003G370200--Sobic008G133400 Sobic010G106900 Sobic010G106900 Sobic003G370200--Sobic010G106900 Sobic001G000200 Sobic001G000200 Sobic003G370200--Sobic001G000200 Sobic009G257800 Sobic009G257800 Sobic003G370200--Sobic009G257800 Sobic001G235900 Sobic001G235900 Sobic003G370200--Sobic001G235900 Sobic002G301500 Sobic002G301500 Sobic010G256800--Sobic002G301500 Sobic010G021000 Sobic010G021000 Sobic010G256800--Sobic010G021000 Sobic010G256800--Sobic008G133400 Sobic010G256800--Sobic010G084000 Sobic001G017600 Sobic001G017600 Sobic010G256800--Sobic001G017600 Sobic010G256932 Sobic010G256932 Sobic010G256800--Sobic010G256932 Sobic010G256800--Sobic003G370200 Sobic008G083000 Sobic008G083000 Sobic010G256800--Sobic008G083000 Sobic009G178300 Sobic009G178300 Sobic010G256800--Sobic009G178300 Sobic001G120300 Sobic001G120300 Sobic010G084000--Sobic001G120300 Sobic010G084000--Sobic010G256800 Sobic010G084000--Sobic003G370200 Sobic010G084000--Sobic010G021000 Sobic010G019800 Sobic010G019800 Sobic010G084000--Sobic010G019800 Sobic010G084000--Sobic002G301500 Sobic010G084000--Sobic008G133400 Sobic010G084000--Sobic010G106900 Sobic001G057200 Sobic001G057200 Sobic010G084000--Sobic001G057200 Sobic001G497300 Sobic001G497300 Sobic006G237400--Sobic001G497300 Sobic008G047800 Sobic008G047800 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic009G249200 Sobic009G249200 Sobic006G237400--Sobic009G249200 Sobic007G217000 Sobic007G217000 Sobic006G237400--Sobic007G217000 Sobic001G253700 Sobic001G253700 Sobic006G237400--Sobic001G253700 Sobic002G310200 Sobic002G310200 Sobic006G237400--Sobic002G310200 Sobic001G474600 Sobic001G474600 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300 Sobic004G039600 Sobic004G039600 Sobic003G126600--Sobic004G039600 Sobic003G249600 Sobic003G249600 Sobic003G126600--Sobic003G249600 Sobic009G229600 Sobic009G229600 Sobic003G126600--Sobic009G229600 Sobic003G187500 Sobic003G187500 Sobic003G126600--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G126600--Sobic010G053800 Sobic001G518400 Sobic001G518400 Sobic003G126600--Sobic001G518400 Sobic001G369000 Sobic001G369000 Sobic003G126600--Sobic001G369000 Sobic003G187200 Sobic003G187200 Sobic003G126600--Sobic003G187200 Sobic004G072100 Sobic004G072100 Sobic003G126600--Sobic004G072100 Sobic008G133400--Sobic001G017600 Sobic008G133400--Sobic010G256800 Sobic008G133400--Sobic009G257800 Sobic009G062900 Sobic009G062900 Sobic008G133400--Sobic009G062900 Sobic009G040700 Sobic009G040700 Sobic008G133400--Sobic009G040700 Sobic008G133400--Sobic008G083000 Sobic005G084100 Sobic005G084100 Sobic008G133400--Sobic005G084100 Sobic004G057400 Sobic004G057400 Sobic008G133400--Sobic004G057400 Sobic004G325400 Sobic004G325400 Sobic008G133400--Sobic004G325400 Sobic010G147833 Sobic010G147833 Sobic010G106900--Sobic010G147833 Sobic010G106900--Sobic003G126600 Sobic002G260900 Sobic002G260900 Sobic010G106900--Sobic002G260900 Sobic010G106900--Sobic001G017600 Sobic010G106900--Sobic008G133400 Sobic010G106900--Sobic008G083000 Sobic007G203500 Sobic007G203500 Sobic010G106900--Sobic007G203500 Sobic002G392700 Sobic002G392700 Sobic010G106900--Sobic002G392700 Sobic010G106900--Sobic002G301500 Sobic009G199200 Sobic009G199200 Sobic001G000200--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic001G000200--Sobic010G205800 Sobic001G000200--Sobic006G237400 Sobic001G000200--Sobic001G253700 Sobic008G004600 Sobic008G004600 Sobic001G000200--Sobic008G004600 Sobic003G233600 Sobic003G233600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G079200 Sobic001G079200 Sobic001G000200--Sobic001G079200 Sobic001G071400 Sobic001G071400 Sobic001G000200--Sobic001G071400 Sobic003G401000 Sobic003G401000 Sobic009G257800--Sobic003G401000 Sobic006G267300 Sobic006G267300 Sobic009G257800--Sobic006G267300 Sobic003G081000 Sobic003G081000 Sobic009G257800--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic009G257800--Sobic004G283000 Sobic009G257800--Sobic004G057400 Sobic002G090800 Sobic002G090800 Sobic009G257800--Sobic002G090800 Sobic006G252700 Sobic006G252700 Sobic009G257800--Sobic006G252700 Sobic009G257800--Sobic004G325400 Sobic001G090400 Sobic001G090400 Sobic009G257800--Sobic001G090400 Sobic001G235900--Sobic006G237400 Sobic001G235900--Sobic001G000200 Sobic007G002300 Sobic007G002300 Sobic001G235900--Sobic007G002300 Sobic001G235900--Sobic001G253700 Sobic009G008400 Sobic009G008400 Sobic001G235900--Sobic009G008400 Sobic001G235900--Sobic001G291000 Sobic003G280800 Sobic003G280800 Sobic001G235900--Sobic003G280800 Sobic004G158700 Sobic004G158700 Sobic001G235900--Sobic004G158700 Sobic009G126400 Sobic009G126400 Sobic001G235900--Sobic009G126400
Octagon: transcription factors


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