Gene annotation
Transcriptome id Sobic.010G106900.1
Synonym Sb10g009360
Functional annotation NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed
UniProt C5Z818
Pfam PF03807 PF17042 PF14833 PF03446 PF07005 PF01116
Panther DB PTHR22981 PTHR22981:SF27
NCBI CDD KOG0409; Predicted dehydrogenase
KEGG Orthology -
Gene Ontology GO:0004616; phosphogluconate dehydrogenase (decarboxylating) activity GO:0016832aldehyde-lyase activity GO:0008270zinc ion binding GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT1G18270 : ketose-bisphosphate aldolase class-II family protein
RAP-DB (Rice) LOC_Os06g14740.1 : NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed
MaizeGDB (Corn) Zm00025a042706
Brachypodium PNT76100 , PNT76101 , KQK18686 , KQK18684 , KQK18685
Barley HORVU7Hr1G041850.5 , HORVU7Hr1G041850.4 , HORVU7Hr1G041850.7 , HORVU7Hr1G041850.6 , HORVU7Hr1G041850.1 , HORVU7Hr1G041850.3 , HORVU7Hr1G041850.2 , HORVU7Hr1G041850.9 , HORVU7Hr1G041850.8 , HORVU7Hr1G041850.18 , HORVU7Hr1G041850.24 , HORVU7Hr1G041850.20 , HORVU7Hr1G041850.21 , HORVU7Hr1G041850.22 , HORVU7Hr1G041850.23 , HORVU7Hr1G041850.11 , HORVU7Hr1G041850.10 , HORVU7Hr1G041850.13 , HORVU7Hr1G041850.12 , HORVU7Hr1G041850.15 , HORVU7Hr1G041850.17 , HORVU7Hr1G041850.16 , HORVU7Hr1G041850.19
Wheat TraesCS7A02G205200 , TraesCS7A02G205200 , TraesCS7D02G208100 , TraesCS7B02G112500 , TraesCS7B02G112500
Populus -


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cDNA sequences
Sobic.010G106900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G147833 - -
2 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
3 Sobic.002G260900 protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
4 Sobic.001G017600 protein of unknown function containing protein, expressed -
5 Sobic.008G133400 unc-93 homolog A, putative, expressed -
6 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
7 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
8 Sobic.002G392700 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
9 Sobic.002G301500 amidase, putative, expressed K01426: E3.5.1.4, amidase
10 Sobic.001G023000 kelch motif family protein, putative, expressed -
11 Sobic.001G539016 - -
12 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
13 Sobic.003G370200 ion channel DMI1, chloroplast precursor, putative, expressed -
14 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
15 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
16 Sobic.001G287500 heat shock protein DnaJ, putative, expressed K09533: DnaJ homolog subfamily C member 13
17 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
18 Sobic.009G005100 - -
19 Sobic.004G326400 ankyrin repeat-rich protein, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
20 Sobic.009G126000 mannosylglycoprotein endo-beta-mannosidase, putative, expressed K18577: mannosylglycoprotein endo-beta-mannosidase


Gene co-expression network
sample Sobic010G106900 Sobic010G106900 Sobic010G147833 Sobic010G147833 Sobic010G106900--Sobic010G147833 Sobic003G126600 Sobic003G126600 Sobic010G106900--Sobic003G126600 Sobic002G260900 Sobic002G260900 Sobic010G106900--Sobic002G260900 Sobic001G017600 Sobic001G017600 Sobic010G106900--Sobic001G017600 Sobic008G133400 Sobic008G133400 Sobic010G106900--Sobic008G133400 Sobic008G083000 Sobic008G083000 Sobic010G106900--Sobic008G083000 Sobic007G203500 Sobic007G203500 Sobic010G106900--Sobic007G203500 Sobic002G392700 Sobic002G392700 Sobic010G106900--Sobic002G392700 Sobic002G301500 Sobic002G301500 Sobic010G106900--Sobic002G301500 Sobic001G214600 Sobic001G214600 Sobic010G147833--Sobic001G214600 Sobic004G260100 Sobic004G260100 Sobic010G147833--Sobic004G260100 Sobic001G170100 Sobic001G170100 Sobic010G147833--Sobic001G170100 Sobic007G019300 Sobic007G019300 Sobic010G147833--Sobic007G019300 Sobic001G426600 Sobic001G426600 Sobic010G147833--Sobic001G426600 Sobic003G057700 Sobic003G057700 Sobic010G147833--Sobic003G057700 Sobic003G249600 Sobic003G249600 Sobic010G147833--Sobic003G249600 Sobic007G120500 Sobic007G120500 Sobic010G147833--Sobic007G120500 Sobic001G287500 Sobic001G287500 Sobic010G147833--Sobic001G287500 Sobic004G039600 Sobic004G039600 Sobic003G126600--Sobic004G039600 Sobic003G126600--Sobic003G249600 Sobic009G229600 Sobic009G229600 Sobic003G126600--Sobic009G229600 Sobic003G187500 Sobic003G187500 Sobic003G126600--Sobic003G187500 Sobic010G053800 Sobic010G053800 Sobic003G126600--Sobic010G053800 Sobic001G518400 Sobic001G518400 Sobic003G126600--Sobic001G518400 Sobic001G369000 Sobic001G369000 Sobic003G126600--Sobic001G369000 Sobic003G187200 Sobic003G187200 Sobic003G126600--Sobic003G187200 Sobic004G072100 Sobic004G072100 Sobic003G126600--Sobic004G072100 Sobic002G260900--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic002G260900--Sobic003G266001 Sobic001G493200 Sobic001G493200 Sobic002G260900--Sobic001G493200 Sobic004G113400 Sobic004G113400 Sobic002G260900--Sobic004G113400 Sobic004G021200 Sobic004G021200 Sobic002G260900--Sobic004G021200 Sobic008G103200 Sobic008G103200 Sobic002G260900--Sobic008G103200 Sobic010G004100 Sobic010G004100 Sobic002G260900--Sobic010G004100 Sobic003G394300 Sobic003G394300 Sobic002G260900--Sobic003G394300 Sobic006G237400 Sobic006G237400 Sobic002G260900--Sobic006G237400 Sobic001G017600--Sobic008G133400 Sobic001G017600--Sobic008G083000 Sobic007G061700 Sobic007G061700 Sobic001G017600--Sobic007G061700 Sobic005G182200 Sobic005G182200 Sobic001G017600--Sobic005G182200 Sobic009G257800 Sobic009G257800 Sobic001G017600--Sobic009G257800 Sobic003G442000 Sobic003G442000 Sobic001G017600--Sobic003G442000 Sobic010G256800 Sobic010G256800 Sobic001G017600--Sobic010G256800 Sobic001G498200 Sobic001G498200 Sobic001G017600--Sobic001G498200 Sobic002G158700 Sobic002G158700 Sobic001G017600--Sobic002G158700 Sobic008G133400--Sobic001G017600 Sobic008G133400--Sobic010G256800 Sobic008G133400--Sobic009G257800 Sobic009G062900 Sobic009G062900 Sobic008G133400--Sobic009G062900 Sobic009G040700 Sobic009G040700 Sobic008G133400--Sobic009G040700 Sobic008G133400--Sobic008G083000 Sobic005G084100 Sobic005G084100 Sobic008G133400--Sobic005G084100 Sobic004G057400 Sobic004G057400 Sobic008G133400--Sobic004G057400 Sobic004G325400 Sobic004G325400 Sobic008G133400--Sobic004G325400 Sobic008G083000--Sobic005G084100 Sobic010G279700 Sobic010G279700 Sobic008G083000--Sobic010G279700 Sobic008G131000 Sobic008G131000 Sobic008G083000--Sobic008G131000 Sobic001G281600 Sobic001G281600 Sobic008G083000--Sobic001G281600 Sobic009G050900 Sobic009G050900 Sobic008G083000--Sobic009G050900 Sobic003G401100 Sobic003G401100 Sobic008G083000--Sobic003G401100 Sobic008G011100 Sobic008G011100 Sobic008G083000--Sobic008G011100 Sobic004G018300 Sobic004G018300 Sobic008G083000--Sobic004G018300 Sobic007G000800 Sobic007G000800 Sobic008G083000--Sobic007G000800 Sobic010G017800 Sobic010G017800 Sobic007G203500--Sobic010G017800 Sobic007G203500--Sobic003G126600 Sobic003G401000 Sobic003G401000 Sobic007G203500--Sobic003G401000 Sobic006G052500 Sobic006G052500 Sobic007G203500--Sobic006G052500 Sobic001G539016 Sobic001G539016 Sobic007G203500--Sobic001G539016 Sobic003G313400 Sobic003G313400 Sobic007G203500--Sobic003G313400 Sobic007G203500--Sobic009G257800 Sobic007G203500--Sobic009G229600 Sobic007G203500--Sobic010G106900 Sobic002G189400 Sobic002G189400 Sobic002G392700--Sobic002G189400 Sobic002G392700--Sobic010G106900 Sobic001G389800 Sobic001G389800 Sobic002G392700--Sobic001G389800 Sobic002G409800 Sobic002G409800 Sobic002G392700--Sobic002G409800 Sobic006G281500 Sobic006G281500 Sobic002G392700--Sobic006G281500 Sobic002G392700--Sobic010G017800 Sobic002G392700--Sobic004G325400 Sobic010G249300 Sobic010G249300 Sobic002G392700--Sobic010G249300 Sobic002G317300 Sobic002G317300 Sobic002G392700--Sobic002G317300 Sobic002G301500--Sobic010G256800 Sobic010G021000 Sobic010G021000 Sobic002G301500--Sobic010G021000 Sobic010G256932 Sobic010G256932 Sobic002G301500--Sobic010G256932 Sobic002G301500--Sobic001G389800 Sobic002G301500--Sobic010G106900 Sobic010G084000 Sobic010G084000 Sobic002G301500--Sobic010G084000 Sobic001G366800 Sobic001G366800 Sobic002G301500--Sobic001G366800 Sobic002G301500--Sobic010G249300 Sobic002G301500--Sobic007G203500
Octagon: transcription factors


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