Gene annotation
Transcriptome id Sobic.001G023000.2
Synonym Sb01g002190
Functional annotation kelch motif family protein, putative, expressed
UniProt A0A1B6QH18
Pfam PF13418 PF13415
Panther DB PTHR23244 PTHR23244:SF262
NCBI CDD KOG0379; Kelch repeat-containing proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36360 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os03g61950.1 : kelch motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a008937
Brachypodium KQK12275
Barley HORVU5Hr1G117920.19 , HORVU5Hr1G117920.18 , HORVU5Hr1G117920.17 , HORVU5Hr1G117920.16 , HORVU5Hr1G117920.15 , HORVU5Hr1G117920.14 , HORVU5Hr1G117920.13 , HORVU5Hr1G117920.11 , HORVU5Hr1G117920.10 , HORVU5Hr1G117920.7 , HORVU5Hr1G117920.6 , HORVU5Hr1G117920.5 , HORVU5Hr1G117920.4 , HORVU5Hr1G117920.3 , HORVU5Hr1G117920.2 , HORVU5Hr1G117920.1 , HORVU5Hr1G117920.9 , HORVU5Hr1G117920.8
Wheat TraesCS5B02G515900 , TraesCS5D02G516000 , TraesCS5D02G516000 , TraesCS4A02G356300
Populus -


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cDNA sequences
Sobic.001G023000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G145800 flowering time control protein FCA, putative, expressed -
2 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
3 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
4 Sobic.001G087600 ZOS9-03 - C2H2 zinc finger protein, expressed -
5 Sobic.008G082500 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
6 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
7 Sobic.007G071200 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
8 Sobic.003G405500 mannosyl-oligosaccharide glucosidase, putative, expressed K01228: mannosyl-oligosaccharide glucosidase
9 Sobic.008G164600 expressed protein -
10 Sobic.010G185400 HEAT repeat family protein, putative, expressed K03456: serine/threonine-protein phosphatase 2A regulatory subunit A
11 Sobic.008G118200 vesicle tethering family protein, putative, expressed -
12 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
13 Sobic.010G186600 expressed protein -
14 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
15 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
16 Sobic.003G164200 cullin, putative, expressed K03347: CUL1, cullin 1
17 Sobic.001G035200 ThiF family domain containing protein, putative, expressed K04532: NAE1, amyloid beta precursor protein binding protein 1
18 Sobic.010G096000 OsDegp10 - Putative Deg protease homologue, expressed -
19 Sobic.008G147200 tubulin, putative, expressed -
20 Sobic.004G156800 RNA pseudouridine synthase, putative, expressed -


Gene co-expression network
sample Sobic001G023000 Sobic001G023000 Sobic002G145800 Sobic002G145800 Sobic001G023000--Sobic002G145800 Sobic001G493200 Sobic001G493200 Sobic001G023000--Sobic001G493200 Sobic010G279700 Sobic010G279700 Sobic001G023000--Sobic010G279700 Sobic001G087600 Sobic001G087600 Sobic001G023000--Sobic001G087600 Sobic008G082500 Sobic008G082500 Sobic001G023000--Sobic008G082500 Sobic001G145400 Sobic001G145400 Sobic001G023000--Sobic001G145400 Sobic007G071200 Sobic007G071200 Sobic001G023000--Sobic007G071200 Sobic003G405500 Sobic003G405500 Sobic001G023000--Sobic003G405500 Sobic008G164600 Sobic008G164600 Sobic001G023000--Sobic008G164600 Sobic006G269800 Sobic006G269800 Sobic002G145800--Sobic006G269800 Sobic003G416700 Sobic003G416700 Sobic002G145800--Sobic003G416700 Sobic007G183300 Sobic007G183300 Sobic002G145800--Sobic007G183300 Sobic002G145800--Sobic001G087600 Sobic001G051700 Sobic001G051700 Sobic002G145800--Sobic001G051700 Sobic003G062300 Sobic003G062300 Sobic002G145800--Sobic003G062300 Sobic008G147200 Sobic008G147200 Sobic002G145800--Sobic008G147200 Sobic002G145800--Sobic001G023000 Sobic010G186600 Sobic010G186600 Sobic002G145800--Sobic010G186600 Sobic009G084900 Sobic009G084900 Sobic001G493200--Sobic009G084900 Sobic003G266001 Sobic003G266001 Sobic001G493200--Sobic003G266001 Sobic010G059500 Sobic010G059500 Sobic001G493200--Sobic010G059500 Sobic001G433800 Sobic001G433800 Sobic001G493200--Sobic001G433800 Sobic004G072100 Sobic004G072100 Sobic001G493200--Sobic004G072100 Sobic004G096400 Sobic004G096400 Sobic001G493200--Sobic004G096400 Sobic007G132100 Sobic007G132100 Sobic001G493200--Sobic007G132100 Sobic006G077200 Sobic006G077200 Sobic001G493200--Sobic006G077200 Sobic003G408600 Sobic003G408600 Sobic001G493200--Sobic003G408600 Sobic001G281600 Sobic001G281600 Sobic010G279700--Sobic001G281600 Sobic008G083000 Sobic008G083000 Sobic010G279700--Sobic008G083000 Sobic003G401100 Sobic003G401100 Sobic010G279700--Sobic003G401100 Sobic001G094900 Sobic001G094900 Sobic010G279700--Sobic001G094900 Sobic007G191700 Sobic007G191700 Sobic010G279700--Sobic007G191700 Sobic005G106500 Sobic005G106500 Sobic010G279700--Sobic005G106500 Sobic008G092300 Sobic008G092300 Sobic010G279700--Sobic008G092300 Sobic007G203200 Sobic007G203200 Sobic010G279700--Sobic007G203200 Sobic004G021200 Sobic004G021200 Sobic010G279700--Sobic004G021200 Sobic001G151100 Sobic001G151100 Sobic001G087600--Sobic001G151100 Sobic001G461400 Sobic001G461400 Sobic001G087600--Sobic001G461400 Sobic001G020000 Sobic001G020000 Sobic001G087600--Sobic001G020000 Sobic001G087600--Sobic002G145800 Sobic002G154000 Sobic002G154000 Sobic001G087600--Sobic002G154000 Sobic001G087600--Sobic003G416700 Sobic002G430300 Sobic002G430300 Sobic001G087600--Sobic002G430300 Sobic005G167700 Sobic005G167700 Sobic001G087600--Sobic005G167700 Sobic002G371700 Sobic002G371700 Sobic001G087600--Sobic002G371700 Sobic008G082500--Sobic009G084900 Sobic010G185400 Sobic010G185400 Sobic008G082500--Sobic010G185400 Sobic010G206300 Sobic010G206300 Sobic008G082500--Sobic010G206300 Sobic008G082500--Sobic006G077200 Sobic008G082500--Sobic010G059500 Sobic008G082500--Sobic001G493200 Sobic002G020700 Sobic002G020700 Sobic008G082500--Sobic002G020700 Sobic008G082500--Sobic001G145400 Sobic004G023100 Sobic004G023100 Sobic008G082500--Sobic004G023100 Sobic006G086600 Sobic006G086600 Sobic001G145400--Sobic006G086600 Sobic001G035200 Sobic001G035200 Sobic001G145400--Sobic001G035200 Sobic001G145400--Sobic010G059500 Sobic001G145400--Sobic006G077200 Sobic001G145400--Sobic003G405500 Sobic010G007100 Sobic010G007100 Sobic001G145400--Sobic010G007100 Sobic004G340400 Sobic004G340400 Sobic001G145400--Sobic004G340400 Sobic001G145400--Sobic009G084900 Sobic004G085000 Sobic004G085000 Sobic001G145400--Sobic004G085000 Sobic008G173100 Sobic008G173100 Sobic007G071200--Sobic008G173100 Sobic009G050900 Sobic009G050900 Sobic007G071200--Sobic009G050900 Sobic007G071200--Sobic001G493200 Sobic006G118700 Sobic006G118700 Sobic007G071200--Sobic006G118700 Sobic005G191900 Sobic005G191900 Sobic007G071200--Sobic005G191900 Sobic009G177500 Sobic009G177500 Sobic007G071200--Sobic009G177500 Sobic002G083500 Sobic002G083500 Sobic007G071200--Sobic002G083500 Sobic003G133900 Sobic003G133900 Sobic007G071200--Sobic003G133900 Sobic007G071200--Sobic003G401100 Sobic003G405500--Sobic001G145400 Sobic008G124800 Sobic008G124800 Sobic003G405500--Sobic008G124800 Sobic003G405500--Sobic002G430300 Sobic003G405500--Sobic009G084900 Sobic006G166200 Sobic006G166200 Sobic003G405500--Sobic006G166200 Sobic004G141800 Sobic004G141800 Sobic003G405500--Sobic004G141800 Sobic003G405500--Sobic006G077200 Sobic003G405500--Sobic010G059500 Sobic003G314700 Sobic003G314700 Sobic003G405500--Sobic003G314700 Sobic010G266500 Sobic010G266500 Sobic008G164600--Sobic010G266500 Sobic006G040800 Sobic006G040800 Sobic008G164600--Sobic006G040800 Sobic008G164600--Sobic001G145400 Sobic007G225100 Sobic007G225100 Sobic008G164600--Sobic007G225100 Sobic004G256500 Sobic004G256500 Sobic008G164600--Sobic004G256500 Sobic010G118000 Sobic010G118000 Sobic008G164600--Sobic010G118000 Sobic008G164600--Sobic002G145800 Sobic004G246100 Sobic004G246100 Sobic008G164600--Sobic004G246100 Sobic009G255600 Sobic009G255600 Sobic008G164600--Sobic009G255600
Octagon: transcription factors


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