Gene annotation
Transcriptome id Sobic.002G301500.1
Synonym
Functional annotation amidase, putative, expressed
UniProt A0A1B6QE70
Pfam PF01425
Panther DB PTHR11895 PTHR11895:SF68
NCBI CDD KOG1211; Amidases
KEGG Orthology K01426; E3.5.1.4, amidase
Gene Ontology GO:0016884; carbon-nitrogen ligase activity, with glutamine as amido-N-donor


Orthologs (automatic annotation)
TAIR AT4G34880 : Amidase family protein
RAP-DB (Rice) LOC_Os04g10460.1 : amidase, putative, expressed
MaizeGDB (Corn) Zm00025a048022 , Zm00025a012487
Brachypodium KQJ81460 , PNT60503 , PNT60502
Barley HORVU5Hr1G087780.10 , HORVU5Hr1G087780.9 , HORVU5Hr1G087780.5 , HORVU5Hr1G087780.4 , HORVU5Hr1G087780.3 , HORVU5Hr1G087780.2 , HORVU2Hr1G003810.2 , HORVU2Hr1G003810.1
Wheat TraesCS2B02G035200 , TraesCS2B02G035800 , TraesCS2B02G037100 , TraesCS3D02G364700 , TraesCS2D02G026900 , TraesCS2B02G037800 , TraesCS2D02G027200 , TraesCS2A02G025200 , TraesCS2D02G026300 , TraesCS3D02G364700 , TraesCS2B02G037500 , TraesCS2D02G027000 , TraesCSU02G233300 , TraesCS2B02G037400 , TraesCS2A02G025000 , TraesCS2B02G035900 , TraesCS2A02G064000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G256800 - -
2 Sobic.010G021000 expressed protein -
3 Sobic.010G256932 - -
4 Sobic.001G389800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
5 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
6 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
7 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
8 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
10 Sobic.010G043600 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.001G017600 protein of unknown function containing protein, expressed -
12 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
13 Sobic.008G133400 unc-93 homolog A, putative, expressed -
14 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
15 Sobic.007G208900 resistance protein LR10, putative, expressed -
16 Sobic.009G112400 OsFBX361 - F-box domain containing protein, expressed -
17 Sobic.006G098200 steroid nuclear receptor, ligand-binding, putative, expressed -
18 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
19 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
20 Sobic.003G370200 ion channel DMI1, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic002G301500 Sobic002G301500 Sobic010G256800 Sobic010G256800 Sobic002G301500--Sobic010G256800 Sobic010G021000 Sobic010G021000 Sobic002G301500--Sobic010G021000 Sobic010G256932 Sobic010G256932 Sobic002G301500--Sobic010G256932 Sobic001G389800 Sobic001G389800 Sobic002G301500--Sobic001G389800 Sobic010G106900 Sobic010G106900 Sobic002G301500--Sobic010G106900 Sobic010G084000 Sobic010G084000 Sobic002G301500--Sobic010G084000 Sobic001G366800 Sobic001G366800 Sobic002G301500--Sobic001G366800 Sobic010G249300 Sobic010G249300 Sobic002G301500--Sobic010G249300 Sobic007G203500 Sobic007G203500 Sobic002G301500--Sobic007G203500 Sobic010G256800--Sobic002G301500 Sobic010G256800--Sobic010G021000 Sobic008G133400 Sobic008G133400 Sobic010G256800--Sobic008G133400 Sobic010G256800--Sobic010G084000 Sobic001G017600 Sobic001G017600 Sobic010G256800--Sobic001G017600 Sobic010G256800--Sobic010G256932 Sobic003G370200 Sobic003G370200 Sobic010G256800--Sobic003G370200 Sobic008G083000 Sobic008G083000 Sobic010G256800--Sobic008G083000 Sobic009G178300 Sobic009G178300 Sobic010G256800--Sobic009G178300 Sobic010G021000--Sobic010G256932 Sobic010G021000--Sobic010G256800 Sobic010G021000--Sobic002G301500 Sobic010G021000--Sobic009G178300 Sobic010G021000--Sobic008G133400 Sobic010G021000--Sobic010G084000 Sobic007G031800 Sobic007G031800 Sobic010G021000--Sobic007G031800 Sobic010G021000--Sobic001G017600 Sobic003G142700 Sobic003G142700 Sobic010G021000--Sobic003G142700 Sobic010G256932--Sobic010G021000 Sobic010G256932--Sobic010G256800 Sobic010G256932--Sobic002G301500 Sobic010G256932--Sobic001G017600 Sobic010G256932--Sobic008G133400 Sobic010G256932--Sobic007G031800 Sobic005G182200 Sobic005G182200 Sobic010G256932--Sobic005G182200 Sobic010G256932--Sobic009G178300 Sobic002G188500 Sobic002G188500 Sobic010G256932--Sobic002G188500 Sobic001G389800--Sobic002G301500 Sobic002G392700 Sobic002G392700 Sobic001G389800--Sobic002G392700 Sobic001G389800--Sobic009G178300 Sobic010G043600 Sobic010G043600 Sobic001G389800--Sobic010G043600 Sobic001G389800--Sobic010G106900 Sobic004G030100 Sobic004G030100 Sobic001G389800--Sobic004G030100 Sobic009G199200 Sobic009G199200 Sobic001G389800--Sobic009G199200 Sobic001G389800--Sobic007G203500 Sobic001G389800--Sobic010G249300 Sobic010G147833 Sobic010G147833 Sobic010G106900--Sobic010G147833 Sobic003G126600 Sobic003G126600 Sobic010G106900--Sobic003G126600 Sobic002G260900 Sobic002G260900 Sobic010G106900--Sobic002G260900 Sobic010G106900--Sobic001G017600 Sobic010G106900--Sobic008G133400 Sobic010G106900--Sobic008G083000 Sobic010G106900--Sobic007G203500 Sobic010G106900--Sobic002G392700 Sobic010G106900--Sobic002G301500 Sobic001G120300 Sobic001G120300 Sobic010G084000--Sobic001G120300 Sobic010G084000--Sobic010G256800 Sobic010G084000--Sobic003G370200 Sobic010G084000--Sobic010G021000 Sobic010G019800 Sobic010G019800 Sobic010G084000--Sobic010G019800 Sobic010G084000--Sobic002G301500 Sobic010G084000--Sobic008G133400 Sobic010G084000--Sobic010G106900 Sobic001G057200 Sobic001G057200 Sobic010G084000--Sobic001G057200 Sobic009G055400 Sobic009G055400 Sobic001G366800--Sobic009G055400 Sobic001G215900 Sobic001G215900 Sobic001G366800--Sobic001G215900 Sobic001G366800--Sobic002G301500 Sobic004G134100 Sobic004G134100 Sobic001G366800--Sobic004G134100 Sobic006G177300 Sobic006G177300 Sobic001G366800--Sobic006G177300 Sobic004G247300 Sobic004G247300 Sobic001G366800--Sobic004G247300 Sobic002G393200 Sobic002G393200 Sobic001G366800--Sobic002G393200 Sobic010G138500 Sobic010G138500 Sobic001G366800--Sobic010G138500 Sobic010G242900 Sobic010G242900 Sobic001G366800--Sobic010G242900 Sobic004G185600 Sobic004G185600 Sobic010G249300--Sobic004G185600 Sobic010G146600 Sobic010G146600 Sobic010G249300--Sobic010G146600 Sobic002G317300 Sobic002G317300 Sobic010G249300--Sobic002G317300 Sobic010G249300--Sobic008G083000 Sobic001G291100 Sobic001G291100 Sobic010G249300--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic010G017800 Sobic010G017800 Sobic007G203500--Sobic010G017800 Sobic007G203500--Sobic003G126600 Sobic003G401000 Sobic003G401000 Sobic007G203500--Sobic003G401000 Sobic006G052500 Sobic006G052500 Sobic007G203500--Sobic006G052500 Sobic001G539016 Sobic001G539016 Sobic007G203500--Sobic001G539016 Sobic003G313400 Sobic003G313400 Sobic007G203500--Sobic003G313400 Sobic009G257800 Sobic009G257800 Sobic007G203500--Sobic009G257800 Sobic009G229600 Sobic009G229600 Sobic007G203500--Sobic009G229600 Sobic007G203500--Sobic010G106900
Octagon: transcription factors


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