Gene annotation
| Transcriptome id | Sobic.008G133400.5,Sobic.008G133400.7,Sobic.008G133400.19,Sobic.008G133400.24,Sobic.008G133400.13,Sobic.008G133400.26,Sobic.008G133400.17,Sobic.008G133400.12,Sobic.008G133400.14,Sobic.008G133400.18,Sobic.008G133400.3,Sobic.008G133400.8,Sobic.008G133400.4,Sobic.008G133400.11,Sobic.008G133400.23,Sobic.008G133400.10,Sobic.008G133400.27,Sobic.008G133400.20,Sobic.008G133400.15,Sobic.008G133400.21,Sobic.008G133400.25,Sobic.008G133400.22,Sobic.008G133400.16,Sobic.008G133400.2,Sobic.008G133400.9 |
|---|---|
| Synonym | Sb08g018550 |
| Functional annotation | unc-93 homolog A, putative, expressed |
| UniProt | A0A1B6PDW3 , A0A1Z5R7C9 , A0A1B6PDH2 , A0A1Z5R7D9 |
| Pfam | PF05978 |
| Panther DB | PTHR19444:SF13 PTHR19444 PTHR19444 PTHR19444:SF13 |
| NCBI CDD | KOG3097; Predicted membrane protein |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G09470 : Major facilitator superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os12g37939.1 : unc-93 homolog A, putative, expressed |
| MaizeGDB (Corn) | Zm00025a004202 |
| Brachypodium | KQJ86213 , KQJ86258 , KQJ86214 , PNT62477 |
| Barley | HORVU5Hr1G021780.11 , HORVU5Hr1G021780.10 , HORVU5Hr1G021780.13 , HORVU5Hr1G021780.12 , HORVU5Hr1G021780.1 , HORVU5Hr1G021780.5 , HORVU5Hr1G021780.9 , HORVU5Hr1G021780.8 , HORVU5Hr1G021780.7 , HORVU5Hr1G021780.3 , HORVU5Hr1G021780.4 , HORVU5Hr1G021780.6 |
| Wheat | TraesCS5D02G096400 , TraesCS5B02G089400 , TraesCS5A02G083600 , TraesCS5A02G083600 , TraesCS5D02G095800 , TraesCS5A02G084000 , TraesCS5B02G089400 , TraesCS5A02G083900 , TraesCS5D02G095800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G017600 | protein of unknown function containing protein, expressed | - |
| 2 | Sobic.010G256800 | - | - |
| 3 | Sobic.009G257800 | sodium/calcium exchanger protein, putative, expressed | K07300: chaA, Ca2+:H+ antiporter |
| 4 | Sobic.009G062900 | structural constituent of ribosome, putative, expressed | - |
| 5 | Sobic.009G040700 | "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed | K01090: protein phosphatase |
| 6 | Sobic.008G083000 | ZOS12-03 - C2H2 zinc finger protein, expressed | - |
| 7 | Sobic.005G084100 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed | - |
| 8 | Sobic.004G057400 | copper-transporting ATPase, putative, expressed | K17686: copA, ctpA, P-type Cu+ transporter |
| 9 | Sobic.004G325400 | cyclic nucleotide-gated ion channel 14, putative, expressed | K05391: cyclic nucleotide gated channel, plant |
| 10 | Sobic.010G106900 | NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed | - |
| 11 | Sobic.010G021000 | expressed protein | - |
| 12 | Sobic.010G083000 | expressed protein | - |
| 13 | Sobic.002G158700 | TATA binding protein-associated factor, putative, expressed | K03131: transcription initiation factor TFIID subunit 6 |
| 14 | Sobic.006G183800 | KH domain containing protein, putative, expressed | K13095: splicing factor 1 |
| 15 | Sobic.005G015100 | OsFBX291 - F-box domain containing protein, expressed | - |
| 16 | Sobic.002G260900 | protein kinase domain containing protein, expressed | K13429: chitin elicitor receptor kinase 1 |
| 17 | Sobic.007G061700 | vacuolar protein sorting-associated protein 18, putative, expressed | - |
| 18 | Sobic.003G442000 | IPP transferase, putative, expressed | K00791: miaA, tRNA dimethylallyltransferase |
| 19 | Sobic.001G544200 | endonuclease, putative, expressed | K10848: ERCC4, DNA excision repair protein ERCC-4 |
| 20 | Sobic.002G076000 | transporter-related, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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