Gene annotation
Transcriptome id Sobic.010G083000.1,Sobic.010G083000.3,Sobic.010G083000.2
Synonym Sb10g007210
Functional annotation expressed protein
UniProt C5Z6I1 , A0A194YHZ9 , A0A1W0VRY8
Pfam -
Panther DB PTHR33344 PTHR33344:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33380 : -
RAP-DB (Rice) LOC_Os06g11070.1 : expressed protein
MaizeGDB (Corn) Zm00025a022203 , Zm00025a049566
Brachypodium PNT69583
Barley HORVU5Hr1G033560.1 , HORVU6Hr1G078760.6 , HORVU6Hr1G078760.4 , HORVU6Hr1G078760.5 , HORVU6Hr1G078760.2 , HORVU6Hr1G078760.3 , HORVU6Hr1G078760.1 , HORVU2Hr1G029880.1
Wheat TraesCS6B02G352500 , TraesCS6B02G352500 , TraesCS6B02G352500 , TraesCS6A02G321700 , TraesCS6A02G321700 , TraesCS6A02G321700 , TraesCS6D02G301400 , TraesCS6D02G301400 , TraesCS6D02G301400 , TraesCS6D02G301400 , TraesCS6D02G301400
Populus -


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cDNA sequences
Sobic.010G083000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
2 Sobic.003G353600 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
3 Sobic.002G076000 transporter-related, putative, expressed -
4 Sobic.002G423200 importin subunit alpha-1b, putative, expressed -
5 Sobic.002G288000 bromodomain domain containing protein, expressed K11723: bromodomain-containing protein 7
6 Sobic.008G133400 unc-93 homolog A, putative, expressed -
7 Sobic.007G041500 diacylglycerol kinase, putative, expressed -
8 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
9 Sobic.006G217200 PPR repeat domain containing protein, putative, expressed -
10 Sobic.006G138000 expressed protein -
11 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
12 Sobic.001G504200 HEAT repeat family protein, putative, expressed -
13 Sobic.002G259800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
14 Sobic.004G232000 TLD family protein, putative, expressed -
15 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
16 Sobic.004G282400 rhoGAP domain containing protein, expressed -
17 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
18 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
19 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
20 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6


Gene co-expression network
sample Sobic010G083000 Sobic010G083000 Sobic007G202600 Sobic007G202600 Sobic010G083000--Sobic007G202600 Sobic003G353600 Sobic003G353600 Sobic010G083000--Sobic003G353600 Sobic002G076000 Sobic002G076000 Sobic010G083000--Sobic002G076000 Sobic002G423200 Sobic002G423200 Sobic010G083000--Sobic002G423200 Sobic002G288000 Sobic002G288000 Sobic010G083000--Sobic002G288000 Sobic008G133400 Sobic008G133400 Sobic010G083000--Sobic008G133400 Sobic007G041500 Sobic007G041500 Sobic010G083000--Sobic007G041500 Sobic009G257800 Sobic009G257800 Sobic010G083000--Sobic009G257800 Sobic006G217200 Sobic006G217200 Sobic010G083000--Sobic006G217200 Sobic007G202600--Sobic010G083000 Sobic007G202600--Sobic007G041500 Sobic002G189400 Sobic002G189400 Sobic007G202600--Sobic002G189400 Sobic004G330900 Sobic004G330900 Sobic007G202600--Sobic004G330900 Sobic004G282400 Sobic004G282400 Sobic007G202600--Sobic004G282400 Sobic010G188400 Sobic010G188400 Sobic007G202600--Sobic010G188400 Sobic002G152200 Sobic002G152200 Sobic007G202600--Sobic002G152200 Sobic009G193300 Sobic009G193300 Sobic007G202600--Sobic009G193300 Sobic006G114500 Sobic006G114500 Sobic007G202600--Sobic006G114500 Sobic006G056000 Sobic006G056000 Sobic003G353600--Sobic006G056000 Sobic001G138400 Sobic001G138400 Sobic003G353600--Sobic001G138400 Sobic003G353600--Sobic002G423200 Sobic004G086200 Sobic004G086200 Sobic003G353600--Sobic004G086200 Sobic003G353600--Sobic002G076000 Sobic003G353600--Sobic010G083000 Sobic007G031600 Sobic007G031600 Sobic003G353600--Sobic007G031600 Sobic008G131000 Sobic008G131000 Sobic003G353600--Sobic008G131000 Sobic004G285000 Sobic004G285000 Sobic003G353600--Sobic004G285000 Sobic002G076000--Sobic006G056000 Sobic005G084100 Sobic005G084100 Sobic002G076000--Sobic005G084100 Sobic002G076000--Sobic003G353600 Sobic003G070100 Sobic003G070100 Sobic002G076000--Sobic003G070100 Sobic009G100050 Sobic009G100050 Sobic002G076000--Sobic009G100050 Sobic004G232000 Sobic004G232000 Sobic002G076000--Sobic004G232000 Sobic004G325400 Sobic004G325400 Sobic002G076000--Sobic004G325400 Sobic009G213100 Sobic009G213100 Sobic002G076000--Sobic009G213100 Sobic002G076000--Sobic010G083000 Sobic002G259800 Sobic002G259800 Sobic002G423200--Sobic002G259800 Sobic005G133500 Sobic005G133500 Sobic002G423200--Sobic005G133500 Sobic004G246100 Sobic004G246100 Sobic002G423200--Sobic004G246100 Sobic006G248500 Sobic006G248500 Sobic002G423200--Sobic006G248500 Sobic008G127400 Sobic008G127400 Sobic002G423200--Sobic008G127400 Sobic010G236400 Sobic010G236400 Sobic002G423200--Sobic010G236400 Sobic002G423200--Sobic003G353600 Sobic002G423200--Sobic001G138400 Sobic006G138000 Sobic006G138000 Sobic002G423200--Sobic006G138000 Sobic002G288000--Sobic006G138000 Sobic010G189000 Sobic010G189000 Sobic002G288000--Sobic010G189000 Sobic006G183800 Sobic006G183800 Sobic002G288000--Sobic006G183800 Sobic001G518400 Sobic001G518400 Sobic002G288000--Sobic001G518400 Sobic003G401000 Sobic003G401000 Sobic002G288000--Sobic003G401000 Sobic002G288000--Sobic002G423200 Sobic001G094000 Sobic001G094000 Sobic002G288000--Sobic001G094000 Sobic002G288000--Sobic004G325400 Sobic006G028200 Sobic006G028200 Sobic002G288000--Sobic006G028200 Sobic001G017600 Sobic001G017600 Sobic008G133400--Sobic001G017600 Sobic010G256800 Sobic010G256800 Sobic008G133400--Sobic010G256800 Sobic008G133400--Sobic009G257800 Sobic009G062900 Sobic009G062900 Sobic008G133400--Sobic009G062900 Sobic009G040700 Sobic009G040700 Sobic008G133400--Sobic009G040700 Sobic008G083000 Sobic008G083000 Sobic008G133400--Sobic008G083000 Sobic008G133400--Sobic005G084100 Sobic004G057400 Sobic004G057400 Sobic008G133400--Sobic004G057400 Sobic008G133400--Sobic004G325400 Sobic007G119200 Sobic007G119200 Sobic007G041500--Sobic007G119200 Sobic009G148300 Sobic009G148300 Sobic007G041500--Sobic009G148300 Sobic010G034000 Sobic010G034000 Sobic007G041500--Sobic010G034000 Sobic008G153000 Sobic008G153000 Sobic007G041500--Sobic008G153000 Sobic001G091400 Sobic001G091400 Sobic007G041500--Sobic001G091400 Sobic007G041500--Sobic004G246100 Sobic004G072100 Sobic004G072100 Sobic007G041500--Sobic004G072100 Sobic010G116600 Sobic010G116600 Sobic007G041500--Sobic010G116600 Sobic002G071500 Sobic002G071500 Sobic007G041500--Sobic002G071500 Sobic009G257800--Sobic003G401000 Sobic006G267300 Sobic006G267300 Sobic009G257800--Sobic006G267300 Sobic003G081000 Sobic003G081000 Sobic009G257800--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic009G257800--Sobic004G283000 Sobic009G257800--Sobic004G057400 Sobic002G090800 Sobic002G090800 Sobic009G257800--Sobic002G090800 Sobic006G252700 Sobic006G252700 Sobic009G257800--Sobic006G252700 Sobic009G257800--Sobic004G325400 Sobic001G090400 Sobic001G090400 Sobic009G257800--Sobic001G090400 Sobic001G454301 Sobic001G454301 Sobic006G217200--Sobic001G454301 Sobic002G421700 Sobic002G421700 Sobic006G217200--Sobic002G421700 Sobic006G217200--Sobic005G133500 Sobic006G217200--Sobic002G259800 Sobic007G000800 Sobic007G000800 Sobic006G217200--Sobic007G000800 Sobic003G239900 Sobic003G239900 Sobic006G217200--Sobic003G239900 Sobic009G151200 Sobic009G151200 Sobic006G217200--Sobic009G151200 Sobic005G009200 Sobic005G009200 Sobic006G217200--Sobic005G009200 Sobic006G013500 Sobic006G013500 Sobic006G217200--Sobic006G013500
Octagon: transcription factors


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