Gene annotation
Transcriptome id Sobic.002G189400.5,Sobic.002G189400.4
Synonym Sb02g023690, AAE17
Functional annotation AMP-binding enzyme, putative, expressed
UniProt A0A1B6QCA1
Pfam PF13193 PF16177 PF00501
Panther DB PTHR24095 PTHR24095:SF161
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G23050 : acyl-activating enzyme 17
RAP-DB (Rice) LOC_Os09g21230.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a029696 , Zm00025a046833 , Zm00025a018328 , Zm00025a035033 , Zm00025a013857 , Zm00025a035411
Brachypodium KQJ90101
Barley HORVU5Hr1G059550.13 , HORVU5Hr1G059550.12 , HORVU5Hr1G059550.11 , HORVU5Hr1G059550.10 , HORVU5Hr1G059550.17 , HORVU5Hr1G059550.16 , HORVU5Hr1G059550.15 , HORVU5Hr1G059550.14 , HORVU5Hr1G059550.3 , HORVU5Hr1G059550.2 , HORVU5Hr1G059550.1 , HORVU5Hr1G059550.7 , HORVU5Hr1G059550.6 , HORVU5Hr1G059550.5 , HORVU5Hr1G059550.4 , HORVU5Hr1G059550.9
Wheat TraesCS5B02G198000 , TraesCS5B02G198000 , TraesCS5B02G198000 , TraesCS5B02G198000 , TraesCS5D02G205300 , TraesCS5D02G205300 , TraesCS5D02G205300 , TraesCS5A02G199700
Populus -


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cDNA sequences
Sobic.002G189400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
2 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
3 Sobic.006G083600 expressed protein K10134: etoposide-induced 2.4 mRNA
4 Sobic.009G148300 expressed protein -
5 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
6 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
7 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
8 Sobic.008G099800 expressed protein -
9 Sobic.002G111600 expressed protein -
10 Sobic.006G148100 DUF647 domain containing protein, putative, expressed -
11 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
12 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
13 Sobic.001G142100 WD domain, G-beta repeat domain containing protein, expressed K04536: guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
14 Sobic.008G186200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
15 Sobic.002G392700 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
16 Sobic.010G004100 expressed protein -
17 Sobic.001G219900 expressed protein -
18 Sobic.001G050600 expressed protein -
19 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
20 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG


Gene co-expression network
sample Sobic002G189400 Sobic002G189400 Sobic010G228500 Sobic010G228500 Sobic002G189400--Sobic010G228500 Sobic004G339100 Sobic004G339100 Sobic002G189400--Sobic004G339100 Sobic006G083600 Sobic006G083600 Sobic002G189400--Sobic006G083600 Sobic009G148300 Sobic009G148300 Sobic002G189400--Sobic009G148300 Sobic007G202600 Sobic007G202600 Sobic002G189400--Sobic007G202600 Sobic004G113400 Sobic004G113400 Sobic002G189400--Sobic004G113400 Sobic004G127700 Sobic004G127700 Sobic002G189400--Sobic004G127700 Sobic008G099800 Sobic008G099800 Sobic002G189400--Sobic008G099800 Sobic002G111600 Sobic002G111600 Sobic002G189400--Sobic002G111600 Sobic002G308500 Sobic002G308500 Sobic010G228500--Sobic002G308500 Sobic004G277200 Sobic004G277200 Sobic010G228500--Sobic004G277200 Sobic008G103300 Sobic008G103300 Sobic010G228500--Sobic008G103300 Sobic010G219000 Sobic010G219000 Sobic010G228500--Sobic010G219000 Sobic010G228500--Sobic008G099800 Sobic010G228500--Sobic002G189400 Sobic010G228500--Sobic004G339100 Sobic002G405500 Sobic002G405500 Sobic010G228500--Sobic002G405500 Sobic007G225100 Sobic007G225100 Sobic010G228500--Sobic007G225100 Sobic004G339100--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G339100--Sobic009G010600 Sobic004G329400 Sobic004G329400 Sobic004G339100--Sobic004G329400 Sobic007G024700 Sobic007G024700 Sobic004G339100--Sobic007G024700 Sobic003G287100 Sobic003G287100 Sobic004G339100--Sobic003G287100 Sobic004G339100--Sobic008G099800 Sobic001G534800 Sobic001G534800 Sobic004G339100--Sobic001G534800 Sobic004G135400 Sobic004G135400 Sobic004G339100--Sobic004G135400 Sobic004G339100--Sobic004G277200 Sobic010G130200 Sobic010G130200 Sobic006G083600--Sobic010G130200 Sobic003G305200 Sobic003G305200 Sobic006G083600--Sobic003G305200 Sobic006G083600--Sobic002G189400 Sobic010G264200 Sobic010G264200 Sobic006G083600--Sobic010G264200 Sobic006G083600--Sobic007G024700 Sobic003G155900 Sobic003G155900 Sobic006G083600--Sobic003G155900 Sobic002G262900 Sobic002G262900 Sobic006G083600--Sobic002G262900 Sobic001G124200 Sobic001G124200 Sobic006G083600--Sobic001G124200 Sobic006G083600--Sobic004G113400 Sobic007G041500 Sobic007G041500 Sobic009G148300--Sobic007G041500 Sobic007G119200 Sobic007G119200 Sobic009G148300--Sobic007G119200 Sobic009G148300--Sobic004G113400 Sobic001G058700 Sobic001G058700 Sobic009G148300--Sobic001G058700 Sobic007G172400 Sobic007G172400 Sobic009G148300--Sobic007G172400 Sobic002G071500 Sobic002G071500 Sobic009G148300--Sobic002G071500 Sobic010G069100 Sobic010G069100 Sobic009G148300--Sobic010G069100 Sobic006G037700 Sobic006G037700 Sobic009G148300--Sobic006G037700 Sobic003G408600 Sobic003G408600 Sobic009G148300--Sobic003G408600 Sobic010G083000 Sobic010G083000 Sobic007G202600--Sobic010G083000 Sobic007G202600--Sobic007G041500 Sobic007G202600--Sobic002G189400 Sobic004G330900 Sobic004G330900 Sobic007G202600--Sobic004G330900 Sobic004G282400 Sobic004G282400 Sobic007G202600--Sobic004G282400 Sobic010G188400 Sobic010G188400 Sobic007G202600--Sobic010G188400 Sobic002G152200 Sobic002G152200 Sobic007G202600--Sobic002G152200 Sobic009G193300 Sobic009G193300 Sobic007G202600--Sobic009G193300 Sobic006G114500 Sobic006G114500 Sobic007G202600--Sobic006G114500 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic004G113400--Sobic001G058700 Sobic004G113400--Sobic008G099800 Sobic001G178700 Sobic001G178700 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic004G113400--Sobic001G534800 Sobic002G430000 Sobic002G430000 Sobic004G113400--Sobic002G430000 Sobic003G233600 Sobic003G233600 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic004G127700--Sobic002G308500 Sobic004G127700--Sobic004G339100 Sobic001G120300 Sobic001G120300 Sobic004G127700--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic004G127700--Sobic001G111150 Sobic009G139900 Sobic009G139900 Sobic004G127700--Sobic009G139900 Sobic009G057300 Sobic009G057300 Sobic004G127700--Sobic009G057300 Sobic004G136300 Sobic004G136300 Sobic004G127700--Sobic004G136300 Sobic006G012500 Sobic006G012500 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic001G281100 Sobic001G281100 Sobic008G099800--Sobic001G281100 Sobic008G099800--Sobic004G113400 Sobic004G039600 Sobic004G039600 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic008G099800--Sobic001G065000 Sobic001G382600 Sobic001G382600 Sobic002G111600--Sobic001G382600 Sobic007G132100 Sobic007G132100 Sobic002G111600--Sobic007G132100 Sobic002G111600--Sobic007G225100 Sobic002G111600--Sobic008G103300 Sobic001G142100 Sobic001G142100 Sobic002G111600--Sobic001G142100 Sobic008G164600 Sobic008G164600 Sobic002G111600--Sobic008G164600 Sobic006G240100 Sobic006G240100 Sobic002G111600--Sobic006G240100 Sobic009G088000 Sobic009G088000 Sobic002G111600--Sobic009G088000 Sobic010G118000 Sobic010G118000 Sobic002G111600--Sobic010G118000
Octagon: transcription factors


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