Gene annotation
Transcriptome id Sobic.006G148100.1
Synonym RUS2, WXR1, Sb06g022670
Functional annotation DUF647 domain containing protein, putative, expressed
UniProt C5YCC9
Pfam PF04884
Panther DB PTHR12770 PTHR12770:SF5
NCBI CDD KOG4249; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31190 : Protein of unknown function, DUF647
RAP-DB (Rice) LOC_Os04g43690.1 : DUF647 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a010715 , Zm00025a010716
Brachypodium -
Barley HORVU2Hr1G089330.5 , HORVU2Hr1G089330.4 , HORVU2Hr1G089330.7 , HORVU2Hr1G089330.6 , HORVU2Hr1G089330.1 , HORVU2Hr1G089330.3 , HORVU2Hr1G089330.2 , HORVU2Hr1G089330.9 , HORVU2Hr1G089330.8 , HORVU2Hr1G089330.11 , HORVU2Hr1G089330.10 , HORVU2Hr1G089330.12
Wheat TraesCS2B02G399100 , TraesCS2D02G378300 , TraesCS2D02G378300 , TraesCS2A02G381800
Populus PNT38113 , PNT38112 , PNT38111 , PNT38110


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
2 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
3 Sobic.009G056200 arginyl-tRNA synthetase, putative, expressed K01887: RARS, arginyl-tRNA synthetase
4 Sobic.002G371300 peroxisome assembly protein, putative, expressed K13346: peroxin-10
5 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
6 Sobic.001G259000 initiation factor 2 subunit family domain containing protein, expressed K03754: translation initiation factor eIF-2B subunit beta
7 Sobic.009G143800 - K14806: DDX31, ATP-dependent RNA helicase DDX31/DBP7
8 Sobic.008G131000 domain of unknown function family protein, expressed -
9 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
10 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
11 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
12 Sobic.001G219900 expressed protein -
13 Sobic.003G266001 - -
14 Sobic.006G136400 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed K03260: translation initiation factor 4G
15 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
16 Sobic.001G244300 GA19388-PA, putative, expressed K10768: alkylated DNA repair protein alkB homolog 6
17 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
18 Sobic.004G200200 joka2, putative, expressed K17987: next to BRCA1 gene 1 protein
19 Sobic.002G256700 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11844: ubiquitin carboxyl-terminal hydrolase 16/45
20 Sobic.001G008200 expressed protein K13211: GC-rich sequence DNA-binding factor


Gene co-expression network
sample Sobic006G148100 Sobic006G148100 Sobic005G172500 Sobic005G172500 Sobic006G148100--Sobic005G172500 Sobic010G118000 Sobic010G118000 Sobic006G148100--Sobic010G118000 Sobic009G056200 Sobic009G056200 Sobic006G148100--Sobic009G056200 Sobic002G371300 Sobic002G371300 Sobic006G148100--Sobic002G371300 Sobic004G353000 Sobic004G353000 Sobic006G148100--Sobic004G353000 Sobic001G259000 Sobic001G259000 Sobic006G148100--Sobic001G259000 Sobic009G143800 Sobic009G143800 Sobic006G148100--Sobic009G143800 Sobic008G131000 Sobic008G131000 Sobic006G148100--Sobic008G131000 Sobic001G473600 Sobic001G473600 Sobic006G148100--Sobic001G473600 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic005G172500--Sobic006G148100 Sobic005G172500--Sobic009G056200 Sobic001G493200 Sobic001G493200 Sobic005G172500--Sobic001G493200 Sobic001G227400 Sobic001G227400 Sobic005G172500--Sobic001G227400 Sobic005G172500--Sobic002G371300 Sobic002G142900 Sobic002G142900 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic004G257100 Sobic004G257100 Sobic005G172500--Sobic004G257100 Sobic010G118000--Sobic002G371300 Sobic010G118000--Sobic006G148100 Sobic009G255600 Sobic009G255600 Sobic010G118000--Sobic009G255600 Sobic003G266001 Sobic003G266001 Sobic010G118000--Sobic003G266001 Sobic010G266500 Sobic010G266500 Sobic010G118000--Sobic010G266500 Sobic010G118000--Sobic009G143800 Sobic010G118000--Sobic004G353000 Sobic007G225100 Sobic007G225100 Sobic010G118000--Sobic007G225100 Sobic008G014500 Sobic008G014500 Sobic010G118000--Sobic008G014500 Sobic009G056200--Sobic005G172500 Sobic001G194200 Sobic001G194200 Sobic009G056200--Sobic001G194200 Sobic009G056200--Sobic001G227400 Sobic006G055200 Sobic006G055200 Sobic009G056200--Sobic006G055200 Sobic003G195000 Sobic003G195000 Sobic009G056200--Sobic003G195000 Sobic007G207200 Sobic007G207200 Sobic009G056200--Sobic007G207200 Sobic008G063300 Sobic008G063300 Sobic009G056200--Sobic008G063300 Sobic009G056200--Sobic002G142900 Sobic006G055300 Sobic006G055300 Sobic009G056200--Sobic006G055300 Sobic001G273700 Sobic001G273700 Sobic002G371300--Sobic001G273700 Sobic007G132100 Sobic007G132100 Sobic002G371300--Sobic007G132100 Sobic002G371300--Sobic005G172500 Sobic003G118200 Sobic003G118200 Sobic002G371300--Sobic003G118200 Sobic002G371300--Sobic004G353000 Sobic004G178200 Sobic004G178200 Sobic002G371300--Sobic004G178200 Sobic002G371300--Sobic010G118000 Sobic007G218000 Sobic007G218000 Sobic002G371300--Sobic007G218000 Sobic003G155900 Sobic003G155900 Sobic002G371300--Sobic003G155900 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic001G259000--Sobic009G143800 Sobic004G156800 Sobic004G156800 Sobic001G259000--Sobic004G156800 Sobic006G270600 Sobic006G270600 Sobic001G259000--Sobic006G270600 Sobic009G101200 Sobic009G101200 Sobic001G259000--Sobic009G101200 Sobic001G145400 Sobic001G145400 Sobic001G259000--Sobic001G145400 Sobic008G160000 Sobic008G160000 Sobic001G259000--Sobic008G160000 Sobic007G039400 Sobic007G039400 Sobic001G259000--Sobic007G039400 Sobic004G340400 Sobic004G340400 Sobic001G259000--Sobic004G340400 Sobic009G138700 Sobic009G138700 Sobic001G259000--Sobic009G138700 Sobic009G143800--Sobic004G353000 Sobic009G143800--Sobic001G259000 Sobic004G332400 Sobic004G332400 Sobic009G143800--Sobic004G332400 Sobic009G143800--Sobic008G014500 Sobic009G143800--Sobic010G118000 Sobic009G143800--Sobic006G200700 Sobic008G147200 Sobic008G147200 Sobic009G143800--Sobic008G147200 Sobic009G143800--Sobic008G131000 Sobic009G143800--Sobic001G291800 Sobic010G236400 Sobic010G236400 Sobic008G131000--Sobic010G236400 Sobic008G083000 Sobic008G083000 Sobic008G131000--Sobic008G083000 Sobic008G131000--Sobic003G266001 Sobic002G396000 Sobic002G396000 Sobic008G131000--Sobic002G396000 Sobic010G209400 Sobic010G209400 Sobic008G131000--Sobic010G209400 Sobic003G401100 Sobic003G401100 Sobic008G131000--Sobic003G401100 Sobic006G194400 Sobic006G194400 Sobic008G131000--Sobic006G194400 Sobic004G084300 Sobic004G084300 Sobic008G131000--Sobic004G084300 Sobic003G187500 Sobic003G187500 Sobic008G131000--Sobic003G187500 Sobic002G034600 Sobic002G034600 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G088100 Sobic001G088100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900
Octagon: transcription factors


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