Gene annotation
Transcriptome id Sobic.002G371300.2
Synonym Sb02g039010, PEX10, ATPEX10
Functional annotation peroxisome assembly protein, putative, expressed
UniProt A0A1W0W7D2
Pfam PF13920 PF04757
Panther DB PTHR23350
NCBI CDD KOG0317; Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein
KEGG Orthology K13346; peroxin-10
Gene Ontology GO:0016558; protein import into peroxisome matrix GO:0008270zinc ion binding GO:0007031peroxisome organization GO:0005779integral component of peroxisomal membrane GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G26350 : peroxin 10
RAP-DB (Rice) LOC_Os07g41800.1 : peroxisome assembly protein, putative, expressed
MaizeGDB (Corn) Zm00025a015190
Brachypodium KQK15292
Barley HORVU2Hr1G031880.2 , HORVU2Hr1G031880.3 , HORVU2Hr1G031880.4 , HORVU2Hr1G031880.12 , HORVU2Hr1G031880.10 , HORVU2Hr1G031880.11 , HORVU2Hr1G031880.16 , HORVU2Hr1G031880.14 , HORVU2Hr1G031880.15 , HORVU2Hr1G031880.18 , HORVU2Hr1G031880.19 , HORVU2Hr1G031880.8 , HORVU2Hr1G031880.9 , HORVU2Hr1G031880.5 , HORVU2Hr1G031880.6 , HORVU2Hr1G031880.7 , HORVU2Hr1G031880.13
Wheat TraesCS2D02G179200 , TraesCS2A02G171700
Populus -


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cDNA sequences
Sobic.002G371300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G273700 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
2 Sobic.007G132100 myrosinase precursor, putative, expressed -
3 Sobic.005G172500 WD repeat-containing protein, putative, expressed K08266: MLST8, target of rapamycin complex subunit LST8
4 Sobic.003G118200 phosphoadenosine phosphosulfate, putative, expressed -
5 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
6 Sobic.004G178200 ligatin, putative, expressed K15027: translation initiation factor 2D
7 Sobic.010G118000 PHD-finger family protein, expressed K17586: PHD and RING finger domain-containing protein 1
8 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
9 Sobic.003G155900 mov34/MPN/PAD-1 family protein, expressed K11866: STAMBP, STAM-binding protein
10 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
11 Sobic.002G045600 transcriptional corepressor SEUSS, putative, expressed -
12 Sobic.008G099800 expressed protein -
13 Sobic.008G063300 exonuclease, putative, expressed K14570: REX1, REXO1, RNA exonuclease 1
14 Sobic.001G227400 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.002G303600 -(PubMedID : 29147737)@RIN3, putative, expressed K10636: AMFR, autocrine motility factor receptor
16 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
17 Sobic.007G172200 inositol or phosphatidylinositol phosphatase/ phosphoric monoester hydrolase, putative, expressed K18081: myotubularin-related protein 1/2
18 Sobic.008G087866 - -
19 Sobic.003G104000 expressed protein K15133: mediator of RNA polymerase II transcription subunit 17
20 Sobic.003G259100 GPI transamidase component family protein, putative, expressed K05289: GPI-anchor transamidase subunit GAA1


Gene co-expression network
sample Sobic002G371300 Sobic002G371300 Sobic001G273700 Sobic001G273700 Sobic002G371300--Sobic001G273700 Sobic007G132100 Sobic007G132100 Sobic002G371300--Sobic007G132100 Sobic005G172500 Sobic005G172500 Sobic002G371300--Sobic005G172500 Sobic003G118200 Sobic003G118200 Sobic002G371300--Sobic003G118200 Sobic004G353000 Sobic004G353000 Sobic002G371300--Sobic004G353000 Sobic004G178200 Sobic004G178200 Sobic002G371300--Sobic004G178200 Sobic010G118000 Sobic010G118000 Sobic002G371300--Sobic010G118000 Sobic007G218000 Sobic007G218000 Sobic002G371300--Sobic007G218000 Sobic003G155900 Sobic003G155900 Sobic002G371300--Sobic003G155900 Sobic007G172200 Sobic007G172200 Sobic001G273700--Sobic007G172200 Sobic001G263600 Sobic001G263600 Sobic001G273700--Sobic001G263600 Sobic008G099800 Sobic008G099800 Sobic001G273700--Sobic008G099800 Sobic001G347500 Sobic001G347500 Sobic001G273700--Sobic001G347500 Sobic007G133700 Sobic007G133700 Sobic001G273700--Sobic007G133700 Sobic007G163100 Sobic007G163100 Sobic001G273700--Sobic007G163100 Sobic001G457900 Sobic001G457900 Sobic001G273700--Sobic001G457900 Sobic001G313700 Sobic001G313700 Sobic001G273700--Sobic001G313700 Sobic002G042600 Sobic002G042600 Sobic001G273700--Sobic002G042600 Sobic007G132100--Sobic007G218000 Sobic004G072100 Sobic004G072100 Sobic007G132100--Sobic004G072100 Sobic004G039600 Sobic004G039600 Sobic007G132100--Sobic004G039600 Sobic007G132100--Sobic004G178200 Sobic006G131000 Sobic006G131000 Sobic007G132100--Sobic006G131000 Sobic006G012500 Sobic006G012500 Sobic007G132100--Sobic006G012500 Sobic009G044800 Sobic009G044800 Sobic007G132100--Sobic009G044800 Sobic007G132100--Sobic008G099800 Sobic010G204400 Sobic010G204400 Sobic007G132100--Sobic010G204400 Sobic004G131300 Sobic004G131300 Sobic005G172500--Sobic004G131300 Sobic006G148100 Sobic006G148100 Sobic005G172500--Sobic006G148100 Sobic009G056200 Sobic009G056200 Sobic005G172500--Sobic009G056200 Sobic001G493200 Sobic001G493200 Sobic005G172500--Sobic001G493200 Sobic001G227400 Sobic001G227400 Sobic005G172500--Sobic001G227400 Sobic005G172500--Sobic002G371300 Sobic002G142900 Sobic002G142900 Sobic005G172500--Sobic002G142900 Sobic003G408600 Sobic003G408600 Sobic005G172500--Sobic003G408600 Sobic004G257100 Sobic004G257100 Sobic005G172500--Sobic004G257100 Sobic009G053900 Sobic009G053900 Sobic003G118200--Sobic009G053900 Sobic009G191000 Sobic009G191000 Sobic003G118200--Sobic009G191000 Sobic009G113000 Sobic009G113000 Sobic003G118200--Sobic009G113000 Sobic003G422500 Sobic003G422500 Sobic003G118200--Sobic003G422500 Sobic002G008900 Sobic002G008900 Sobic003G118200--Sobic002G008900 Sobic004G347400 Sobic004G347400 Sobic003G118200--Sobic004G347400 Sobic007G075400 Sobic007G075400 Sobic003G118200--Sobic007G075400 Sobic001G451400 Sobic001G451400 Sobic003G118200--Sobic001G451400 Sobic003G313500 Sobic003G313500 Sobic003G118200--Sobic003G313500 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic009G143800 Sobic009G143800 Sobic004G353000--Sobic009G143800 Sobic010G116600 Sobic010G116600 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic004G353000--Sobic009G044800 Sobic001G473600 Sobic001G473600 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic004G178200--Sobic007G132100 Sobic004G178200--Sobic007G218000 Sobic006G136400 Sobic006G136400 Sobic004G178200--Sobic006G136400 Sobic004G178200--Sobic006G131000 Sobic006G126100 Sobic006G126100 Sobic004G178200--Sobic006G126100 Sobic004G178200--Sobic006G012500 Sobic004G178200--Sobic010G116600 Sobic002G303600 Sobic002G303600 Sobic004G178200--Sobic002G303600 Sobic004G178200--Sobic004G039600 Sobic010G118000--Sobic002G371300 Sobic010G118000--Sobic006G148100 Sobic009G255600 Sobic009G255600 Sobic010G118000--Sobic009G255600 Sobic003G266001 Sobic003G266001 Sobic010G118000--Sobic003G266001 Sobic010G266500 Sobic010G266500 Sobic010G118000--Sobic010G266500 Sobic010G118000--Sobic009G143800 Sobic010G118000--Sobic004G353000 Sobic007G225100 Sobic007G225100 Sobic010G118000--Sobic007G225100 Sobic008G014500 Sobic008G014500 Sobic010G118000--Sobic008G014500 Sobic007G218000--Sobic007G132100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic007G218000--Sobic006G131000 Sobic007G218000--Sobic009G044800 Sobic007G218000--Sobic010G204400 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic003G352200 Sobic003G352200 Sobic003G155900--Sobic003G352200 Sobic003G155900--Sobic007G163100 Sobic001G124200 Sobic001G124200 Sobic003G155900--Sobic001G124200 Sobic003G155900--Sobic006G012500 Sobic001G392300 Sobic001G392300 Sobic003G155900--Sobic001G392300 Sobic002G262900 Sobic002G262900 Sobic003G155900--Sobic002G262900 Sobic010G205800 Sobic010G205800 Sobic003G155900--Sobic010G205800 Sobic003G422900 Sobic003G422900 Sobic003G155900--Sobic003G422900 Sobic002G045600 Sobic002G045600 Sobic003G155900--Sobic002G045600
Octagon: transcription factors


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