Gene annotation
Transcriptome id Sobic.002G392700.1
Synonym XK-2, XK2, Sb02g040810
Functional annotation FGGY family of carbohydrate kinases, putative, expressed
UniProt C5X3D5
Pfam PF00370 PF02782
Panther DB PTHR10196 PTHR10196:SF57
NCBI CDD -
KEGG Orthology K00854; xylB, xylulokinase
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G49650 : xylulose kinase-2
RAP-DB (Rice) LOC_Os07g44660.1 : FGGY family of carbohydrate kinases, putative, expressed
MaizeGDB (Corn) Zm00025a014156 , Zm00025a024340 , Zm00025a015264
Brachypodium KQK14981
Barley HORVU2Hr1G025980.1 , HORVU2Hr1G025980.2 , HORVU2Hr1G025980.3 , HORVU2Hr1G025980.4 , HORVU2Hr1G025980.5
Wheat TraesCS2B02G172100 , TraesCS2A02G146800 , TraesCS2D02G151400 , TraesCS2D02G151400
Populus -


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cDNA sequences
Sobic.002G392700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
2 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
3 Sobic.001G389800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
4 Sobic.002G409800 xylose isomerase, putative, expressed K01805: xylose isomerase
5 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
6 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
7 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
8 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
11 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
12 Sobic.009G050900 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed K10532: heparan-alpha-glucosaminide N-acetyltransferase
13 Sobic.008G088830 - -
14 Sobic.006G114500 per1-like family protein, putative, expressed -
15 Sobic.001G394600 expressed protein -
16 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
17 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
18 Sobic.002G076000 transporter-related, putative, expressed -
19 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
20 Sobic.001G201400 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1


Gene co-expression network
sample Sobic002G392700 Sobic002G392700 Sobic002G189400 Sobic002G189400 Sobic002G392700--Sobic002G189400 Sobic010G106900 Sobic010G106900 Sobic002G392700--Sobic010G106900 Sobic001G389800 Sobic001G389800 Sobic002G392700--Sobic001G389800 Sobic002G409800 Sobic002G409800 Sobic002G392700--Sobic002G409800 Sobic006G281500 Sobic006G281500 Sobic002G392700--Sobic006G281500 Sobic010G017800 Sobic010G017800 Sobic002G392700--Sobic010G017800 Sobic004G325400 Sobic004G325400 Sobic002G392700--Sobic004G325400 Sobic010G249300 Sobic010G249300 Sobic002G392700--Sobic010G249300 Sobic002G317300 Sobic002G317300 Sobic002G392700--Sobic002G317300 Sobic010G228500 Sobic010G228500 Sobic002G189400--Sobic010G228500 Sobic004G339100 Sobic004G339100 Sobic002G189400--Sobic004G339100 Sobic006G083600 Sobic006G083600 Sobic002G189400--Sobic006G083600 Sobic009G148300 Sobic009G148300 Sobic002G189400--Sobic009G148300 Sobic007G202600 Sobic007G202600 Sobic002G189400--Sobic007G202600 Sobic004G113400 Sobic004G113400 Sobic002G189400--Sobic004G113400 Sobic004G127700 Sobic004G127700 Sobic002G189400--Sobic004G127700 Sobic008G099800 Sobic008G099800 Sobic002G189400--Sobic008G099800 Sobic002G111600 Sobic002G111600 Sobic002G189400--Sobic002G111600 Sobic010G147833 Sobic010G147833 Sobic010G106900--Sobic010G147833 Sobic003G126600 Sobic003G126600 Sobic010G106900--Sobic003G126600 Sobic002G260900 Sobic002G260900 Sobic010G106900--Sobic002G260900 Sobic001G017600 Sobic001G017600 Sobic010G106900--Sobic001G017600 Sobic008G133400 Sobic008G133400 Sobic010G106900--Sobic008G133400 Sobic008G083000 Sobic008G083000 Sobic010G106900--Sobic008G083000 Sobic007G203500 Sobic007G203500 Sobic010G106900--Sobic007G203500 Sobic010G106900--Sobic002G392700 Sobic002G301500 Sobic002G301500 Sobic010G106900--Sobic002G301500 Sobic001G389800--Sobic002G301500 Sobic001G389800--Sobic002G392700 Sobic009G178300 Sobic009G178300 Sobic001G389800--Sobic009G178300 Sobic010G043600 Sobic010G043600 Sobic001G389800--Sobic010G043600 Sobic001G389800--Sobic010G106900 Sobic004G030100 Sobic004G030100 Sobic001G389800--Sobic004G030100 Sobic009G199200 Sobic009G199200 Sobic001G389800--Sobic009G199200 Sobic001G389800--Sobic007G203500 Sobic001G389800--Sobic010G249300 Sobic009G213100 Sobic009G213100 Sobic002G409800--Sobic009G213100 Sobic003G158300 Sobic003G158300 Sobic002G409800--Sobic003G158300 Sobic002G076000 Sobic002G076000 Sobic002G409800--Sobic002G076000 Sobic002G409800--Sobic002G392700 Sobic002G409800--Sobic002G189400 Sobic002G409800--Sobic001G017600 Sobic010G083000 Sobic010G083000 Sobic002G409800--Sobic010G083000 Sobic009G055400 Sobic009G055400 Sobic002G409800--Sobic009G055400 Sobic001G507900 Sobic001G507900 Sobic002G409800--Sobic001G507900 Sobic001G263000 Sobic001G263000 Sobic006G281500--Sobic001G263000 Sobic009G227900 Sobic009G227900 Sobic006G281500--Sobic009G227900 Sobic009G081500 Sobic009G081500 Sobic006G281500--Sobic009G081500 Sobic006G281500--Sobic002G317300 Sobic005G105500 Sobic005G105500 Sobic006G281500--Sobic005G105500 Sobic002G259400 Sobic002G259400 Sobic006G281500--Sobic002G259400 Sobic007G188600 Sobic007G188600 Sobic006G281500--Sobic007G188600 Sobic003G119400 Sobic003G119400 Sobic006G281500--Sobic003G119400 Sobic010G085200 Sobic010G085200 Sobic006G281500--Sobic010G085200 Sobic002G313500 Sobic002G313500 Sobic010G017800--Sobic002G313500 Sobic001G518400 Sobic001G518400 Sobic010G017800--Sobic001G518400 Sobic008G139700 Sobic008G139700 Sobic010G017800--Sobic008G139700 Sobic001G335900 Sobic001G335900 Sobic010G017800--Sobic001G335900 Sobic009G229600 Sobic009G229600 Sobic010G017800--Sobic009G229600 Sobic010G017800--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic010G017800--Sobic005G216300 Sobic001G371200 Sobic001G371200 Sobic010G017800--Sobic001G371200 Sobic003G340900 Sobic003G340900 Sobic010G017800--Sobic003G340900 Sobic009G257800 Sobic009G257800 Sobic004G325400--Sobic009G257800 Sobic007G027700 Sobic007G027700 Sobic004G325400--Sobic007G027700 Sobic007G009400 Sobic007G009400 Sobic004G325400--Sobic007G009400 Sobic003G401100 Sobic003G401100 Sobic004G325400--Sobic003G401100 Sobic001G143500 Sobic001G143500 Sobic004G325400--Sobic001G143500 Sobic004G021200 Sobic004G021200 Sobic004G325400--Sobic004G021200 Sobic003G401000 Sobic003G401000 Sobic004G325400--Sobic003G401000 Sobic004G072100 Sobic004G072100 Sobic004G325400--Sobic004G072100 Sobic008G127400 Sobic008G127400 Sobic004G325400--Sobic008G127400 Sobic004G185600 Sobic004G185600 Sobic010G249300--Sobic004G185600 Sobic010G146600 Sobic010G146600 Sobic010G249300--Sobic010G146600 Sobic010G249300--Sobic002G317300 Sobic010G249300--Sobic008G083000 Sobic001G291100 Sobic001G291100 Sobic010G249300--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic002G317300--Sobic009G199200 Sobic002G317300--Sobic010G249300 Sobic002G317300--Sobic010G146600 Sobic002G317300--Sobic001G281600 Sobic006G032900 Sobic006G032900 Sobic002G317300--Sobic006G032900 Sobic002G166300 Sobic002G166300 Sobic002G317300--Sobic002G166300 Sobic002G317300--Sobic008G083000 Sobic007G067700 Sobic007G067700 Sobic002G317300--Sobic007G067700 Sobic010G279700 Sobic010G279700 Sobic002G317300--Sobic010G279700
Octagon: transcription factors


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