Gene annotation
Transcriptome id Sobic.004G127700.1
Synonym FUC95A
Functional annotation alpha-1,2-fucosidase, putative, expressed
UniProt A0A194YP96
Pfam PF14498
Panther DB PTHR31084 PTHR31084:SF5
NCBI CDD -
KEGG Orthology K15923; AXY8, FUC95A, alpha-L-fucosidase 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34260 : 1,2-alpha-L-fucosidases
RAP-DB (Rice) LOC_Os10g19880.1 : alpha-1,2-fucosidase, putative, expressed
MaizeGDB (Corn) Zm00025a003967
Brachypodium PNT75165 , PNT75167 , PNT75166 , PNT75169 , PNT75168 , KQK16350 , KQK16351 , KQJ96581 , KQJ96582 , PNT75176 , PNT75174 , PNT75175 , PNT75172 , PNT75173 , PNT75170 , PNT75171
Barley HORVU4Hr1G069280.1 , HORVU4Hr1G069280.6 , HORVU4Hr1G069280.3 , HORVU4Hr1G069280.2 , HORVU4Hr1G069280.5 , HORVU4Hr1G069280.4 , HORVU4Hr1G069280.8
Wheat TraesCS4D02G253400 , TraesCS4D02G253400 , TraesCS4D02G253400 , TraesCS4D02G253400 , TraesCS4D02G253400 , TraesCS4A02G051000 , TraesCS4A02G051000 , TraesCS4D02G253500 , TraesCS4B02G253300 , TraesCS4B02G253300 , TraesCS4B02G253300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G233600 aspartyl aminopeptidase, putative, expressed K01267: aspartyl aminopeptidase
2 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
3 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
4 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
5 Sobic.001G120300 phytanoyl-CoA dioxygenase, putative, expressed K00477: phytanoyl-CoA hydroxylase
6 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
7 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
8 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
9 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
10 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
11 Sobic.001G000200 TBC domain containing protein, expressed -
12 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
13 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
14 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
15 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
16 Sobic.001G394600 expressed protein -
17 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
18 Sobic.008G088851 - -
19 Sobic.010G205800 palmitoyltransferase TIP1, putative, expressed K18932: palmitoyltransferase
20 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -


Gene co-expression network
sample Sobic004G127700 Sobic004G127700 Sobic003G233600 Sobic003G233600 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic002G308500 Sobic002G308500 Sobic004G127700--Sobic002G308500 Sobic004G339100 Sobic004G339100 Sobic004G127700--Sobic004G339100 Sobic001G120300 Sobic001G120300 Sobic004G127700--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic004G127700--Sobic001G111150 Sobic009G139900 Sobic009G139900 Sobic004G127700--Sobic009G139900 Sobic009G057300 Sobic009G057300 Sobic004G127700--Sobic009G057300 Sobic004G136300 Sobic004G136300 Sobic004G127700--Sobic004G136300 Sobic003G233600--Sobic004G127700 Sobic002G166300 Sobic002G166300 Sobic003G233600--Sobic002G166300 Sobic009G199200 Sobic009G199200 Sobic003G233600--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic003G233600--Sobic010G205800 Sobic001G079200 Sobic001G079200 Sobic003G233600--Sobic001G079200 Sobic001G000200 Sobic001G000200 Sobic003G233600--Sobic001G000200 Sobic004G296400 Sobic004G296400 Sobic003G233600--Sobic004G296400 Sobic003G273600 Sobic003G273600 Sobic003G233600--Sobic003G273600 Sobic003G233600--Sobic004G136300 Sobic007G024700 Sobic007G024700 Sobic009G094300--Sobic007G024700 Sobic004G113400 Sobic004G113400 Sobic009G094300--Sobic004G113400 Sobic002G270500 Sobic002G270500 Sobic009G094300--Sobic002G270500 Sobic004G329400 Sobic004G329400 Sobic009G094300--Sobic004G329400 Sobic005G157000 Sobic005G157000 Sobic009G094300--Sobic005G157000 Sobic004G052900 Sobic004G052900 Sobic009G094300--Sobic004G052900 Sobic001G270400 Sobic001G270400 Sobic009G094300--Sobic001G270400 Sobic001G248300 Sobic001G248300 Sobic009G094300--Sobic001G248300 Sobic001G207400 Sobic001G207400 Sobic009G094300--Sobic001G207400 Sobic008G124800 Sobic008G124800 Sobic002G308500--Sobic008G124800 Sobic003G233400 Sobic003G233400 Sobic002G308500--Sobic003G233400 Sobic008G099800 Sobic008G099800 Sobic002G308500--Sobic008G099800 Sobic010G228500 Sobic010G228500 Sobic002G308500--Sobic010G228500 Sobic001G404600 Sobic001G404600 Sobic002G308500--Sobic001G404600 Sobic007G019300 Sobic007G019300 Sobic002G308500--Sobic007G019300 Sobic001G137000 Sobic001G137000 Sobic002G308500--Sobic001G137000 Sobic003G312100 Sobic003G312100 Sobic002G308500--Sobic003G312100 Sobic001G426600 Sobic001G426600 Sobic002G308500--Sobic001G426600 Sobic004G339100--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G339100--Sobic009G010600 Sobic004G339100--Sobic004G329400 Sobic004G339100--Sobic007G024700 Sobic003G287100 Sobic003G287100 Sobic004G339100--Sobic003G287100 Sobic004G339100--Sobic008G099800 Sobic001G534800 Sobic001G534800 Sobic004G339100--Sobic001G534800 Sobic004G135400 Sobic004G135400 Sobic004G339100--Sobic004G135400 Sobic004G277200 Sobic004G277200 Sobic004G339100--Sobic004G277200 Sobic003G354400 Sobic003G354400 Sobic001G120300--Sobic003G354400 Sobic001G394600 Sobic001G394600 Sobic001G120300--Sobic001G394600 Sobic001G120300--Sobic004G127700 Sobic010G084000 Sobic010G084000 Sobic001G120300--Sobic010G084000 Sobic001G123000 Sobic001G123000 Sobic001G120300--Sobic001G123000 Sobic001G120300--Sobic010G205800 Sobic001G120300--Sobic001G000200 Sobic004G183600 Sobic004G183600 Sobic001G120300--Sobic004G183600 Sobic002G092300 Sobic002G092300 Sobic001G120300--Sobic002G092300 Sobic010G130200 Sobic010G130200 Sobic001G111150--Sobic010G130200 Sobic007G068100 Sobic007G068100 Sobic001G111150--Sobic007G068100 Sobic001G111150--Sobic009G057300 Sobic001G111150--Sobic003G354400 Sobic010G001500 Sobic010G001500 Sobic001G111150--Sobic010G001500 Sobic003G388251 Sobic003G388251 Sobic001G111150--Sobic003G388251 Sobic001G474500 Sobic001G474500 Sobic001G111150--Sobic001G474500 Sobic001G111150--Sobic004G127700 Sobic004G124200 Sobic004G124200 Sobic001G111150--Sobic004G124200 Sobic009G139900--Sobic004G136300 Sobic009G139900--Sobic002G166300 Sobic010G138000 Sobic010G138000 Sobic009G139900--Sobic010G138000 Sobic009G139900--Sobic003G233600 Sobic009G139900--Sobic004G127700 Sobic009G143700 Sobic009G143700 Sobic009G139900--Sobic009G143700 Sobic009G139900--Sobic003G273600 Sobic007G054800 Sobic007G054800 Sobic009G139900--Sobic007G054800 Sobic001G333100 Sobic001G333100 Sobic009G139900--Sobic001G333100 Sobic003G061800 Sobic003G061800 Sobic009G057300--Sobic003G061800 Sobic009G057300--Sobic001G474500 Sobic009G057300--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic009G057300--Sobic001G325200 Sobic009G057300--Sobic003G388251 Sobic003G329400 Sobic003G329400 Sobic009G057300--Sobic003G329400 Sobic009G057300--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G057300--Sobic001G334600 Sobic001G322700 Sobic001G322700 Sobic009G057300--Sobic001G322700 Sobic004G136300--Sobic010G138000 Sobic004G136300--Sobic009G139900 Sobic009G133500 Sobic009G133500 Sobic004G136300--Sobic009G133500 Sobic003G164200 Sobic003G164200 Sobic004G136300--Sobic003G164200 Sobic005G096400 Sobic005G096400 Sobic004G136300--Sobic005G096400 Sobic010G139600 Sobic010G139600 Sobic004G136300--Sobic010G139600 Sobic004G136300--Sobic003G233600 Sobic006G041600 Sobic006G041600 Sobic004G136300--Sobic006G041600 Sobic003G155900 Sobic003G155900 Sobic004G136300--Sobic003G155900
Octagon: transcription factors


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