Gene annotation
Transcriptome id Sobic.010G043600.2,Sobic.010G043600.1,Sobic.010G043600.3
Synonym Sb10g003840, iqd9
Functional annotation IQ calmodulin-binding motif domain containing protein, expressed
UniProt C5Z4E0
Pfam -
Panther DB PTHR32295 PTHR32295:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33990 : IQ-domain 9
RAP-DB (Rice) LOC_Os06g06160.1,LOC_Os06g06160.5,LOC_Os06g06160.4 : IQ calmodulin-binding motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a027521 , Zm00025a016653 , Zm00025a049988
Brachypodium KQK19564 , KQK19565 , KQK19566
Barley HORVU7Hr1G023980.1 , HORVU7Hr1G024060.1 , HORVU7Hr1G023980.2 , HORVU7Hr1G023980.3 , HORVU7Hr1G023980.4
Wheat TraesCS7D02G107600 , TraesCS7D02G107600 , TraesCS7A02G112000 , TraesCS7A02G112000 , TraesCS7B02G010100 , TraesCS7B02G010100
Populus -


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cDNA sequences
Sobic.010G043600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
2 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
3 Sobic.002G301500 amidase, putative, expressed K01426: E3.5.1.4, amidase
4 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
6 Sobic.001G389800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
7 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.001G291100 tetraspanin family protein, putative, expressed -
9 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.003G328700 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
11 Sobic.010G058500 vesicle-associated membrane protein, putative, expressed K08515: vesicle-associated membrane protein 7
12 Sobic.003G314100 AGAP000951-PA, putative, expressed -
13 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.009G117300 protein kinase APK1B, chloroplast precursor, putative, expressed -
15 Sobic.009G117400 protein kinase domain containing protein, expressed -
16 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
17 Sobic.001G275900 calcium-transporting ATPase, plasma membrane-type, putative, expressed -
18 Sobic.007G090427 - -
19 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
20 Sobic.002G270300 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins


Gene co-expression network
sample Sobic010G043600 Sobic010G043600 Sobic001G372000 Sobic001G372000 Sobic010G043600--Sobic001G372000 Sobic001G467000 Sobic001G467000 Sobic010G043600--Sobic001G467000 Sobic002G301500 Sobic002G301500 Sobic010G043600--Sobic002G301500 Sobic010G249300 Sobic010G249300 Sobic010G043600--Sobic010G249300 Sobic007G203500 Sobic007G203500 Sobic010G043600--Sobic007G203500 Sobic001G389800 Sobic001G389800 Sobic010G043600--Sobic001G389800 Sobic001G464100 Sobic001G464100 Sobic010G043600--Sobic001G464100 Sobic001G291100 Sobic001G291100 Sobic010G043600--Sobic001G291100 Sobic002G317300 Sobic002G317300 Sobic010G043600--Sobic002G317300 Sobic001G372000--Sobic001G467000 Sobic004G150400 Sobic004G150400 Sobic001G372000--Sobic004G150400 Sobic010G145900 Sobic010G145900 Sobic001G372000--Sobic010G145900 Sobic006G209500 Sobic006G209500 Sobic001G372000--Sobic006G209500 Sobic001G512600 Sobic001G512600 Sobic001G372000--Sobic001G512600 Sobic002G132300 Sobic002G132300 Sobic001G372000--Sobic002G132300 Sobic001G372000--Sobic001G291100 Sobic001G478300 Sobic001G478300 Sobic001G372000--Sobic001G478300 Sobic003G305400 Sobic003G305400 Sobic001G372000--Sobic003G305400 Sobic001G467000--Sobic001G372000 Sobic003G045400 Sobic003G045400 Sobic001G467000--Sobic003G045400 Sobic001G467000--Sobic004G150400 Sobic001G467000--Sobic001G512600 Sobic001G467000--Sobic001G464100 Sobic002G313500 Sobic002G313500 Sobic001G467000--Sobic002G313500 Sobic001G028400 Sobic001G028400 Sobic001G467000--Sobic001G028400 Sobic010G211300 Sobic010G211300 Sobic001G467000--Sobic010G211300 Sobic001G467000--Sobic001G291100 Sobic010G256800 Sobic010G256800 Sobic002G301500--Sobic010G256800 Sobic010G021000 Sobic010G021000 Sobic002G301500--Sobic010G021000 Sobic010G256932 Sobic010G256932 Sobic002G301500--Sobic010G256932 Sobic002G301500--Sobic001G389800 Sobic010G106900 Sobic010G106900 Sobic002G301500--Sobic010G106900 Sobic010G084000 Sobic010G084000 Sobic002G301500--Sobic010G084000 Sobic001G366800 Sobic001G366800 Sobic002G301500--Sobic001G366800 Sobic002G301500--Sobic010G249300 Sobic002G301500--Sobic007G203500 Sobic004G185600 Sobic004G185600 Sobic010G249300--Sobic004G185600 Sobic010G146600 Sobic010G146600 Sobic010G249300--Sobic010G146600 Sobic010G249300--Sobic002G317300 Sobic008G083000 Sobic008G083000 Sobic010G249300--Sobic008G083000 Sobic010G249300--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G249300--Sobic001G281600 Sobic006G047100 Sobic006G047100 Sobic010G249300--Sobic006G047100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic010G017800 Sobic010G017800 Sobic007G203500--Sobic010G017800 Sobic003G126600 Sobic003G126600 Sobic007G203500--Sobic003G126600 Sobic003G401000 Sobic003G401000 Sobic007G203500--Sobic003G401000 Sobic006G052500 Sobic006G052500 Sobic007G203500--Sobic006G052500 Sobic001G539016 Sobic001G539016 Sobic007G203500--Sobic001G539016 Sobic003G313400 Sobic003G313400 Sobic007G203500--Sobic003G313400 Sobic009G257800 Sobic009G257800 Sobic007G203500--Sobic009G257800 Sobic009G229600 Sobic009G229600 Sobic007G203500--Sobic009G229600 Sobic007G203500--Sobic010G106900 Sobic001G389800--Sobic002G301500 Sobic002G392700 Sobic002G392700 Sobic001G389800--Sobic002G392700 Sobic009G178300 Sobic009G178300 Sobic001G389800--Sobic009G178300 Sobic001G389800--Sobic010G043600 Sobic001G389800--Sobic010G106900 Sobic004G030100 Sobic004G030100 Sobic001G389800--Sobic004G030100 Sobic009G199200 Sobic009G199200 Sobic001G389800--Sobic009G199200 Sobic001G389800--Sobic007G203500 Sobic001G389800--Sobic010G249300 Sobic001G464100--Sobic001G467000 Sobic001G371200 Sobic001G371200 Sobic001G464100--Sobic001G371200 Sobic003G154700 Sobic003G154700 Sobic001G464100--Sobic003G154700 Sobic001G464100--Sobic001G291100 Sobic001G119300 Sobic001G119300 Sobic001G464100--Sobic001G119300 Sobic001G464100--Sobic002G313500 Sobic001G464100--Sobic001G281600 Sobic001G464100--Sobic003G045400 Sobic001G464100--Sobic010G249300 Sobic009G157200 Sobic009G157200 Sobic001G291100--Sobic009G157200 Sobic001G291100--Sobic001G281600 Sobic004G119000 Sobic004G119000 Sobic001G291100--Sobic004G119000 Sobic010G056200 Sobic010G056200 Sobic001G291100--Sobic010G056200 Sobic001G291100--Sobic001G119300 Sobic001G291100--Sobic004G150400 Sobic001G107500 Sobic001G107500 Sobic001G291100--Sobic001G107500 Sobic006G088100 Sobic006G088100 Sobic001G291100--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic001G291100--Sobic004G083700 Sobic002G317300--Sobic009G199200 Sobic002G317300--Sobic010G249300 Sobic002G317300--Sobic010G146600 Sobic002G317300--Sobic001G281600 Sobic006G032900 Sobic006G032900 Sobic002G317300--Sobic006G032900 Sobic002G166300 Sobic002G166300 Sobic002G317300--Sobic002G166300 Sobic002G317300--Sobic008G083000 Sobic007G067700 Sobic007G067700 Sobic002G317300--Sobic007G067700 Sobic010G279700 Sobic010G279700 Sobic002G317300--Sobic010G279700
Octagon: transcription factors


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