Gene annotation
Transcriptome id Sobic.009G126000.2,Sobic.009G126000.1
Synonym Sb09g019350
Functional annotation mannosylglycoprotein endo-beta-mannosidase, putative, expressed
UniProt A0A1Z5R2C3 , C5YXI8
Pfam PF02837 PF00703 PF02836 PF00703
Panther DB PTHR10066 PTHR10066:SF56
NCBI CDD -
KEGG Orthology K18577; mannosylglycoprotein endo-beta-mannosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G09010 : glycoside hydrolase family 2 protein
RAP-DB (Rice) LOC_Os05g32530.1 : mannosylglycoprotein endo-beta-mannosidase, putative, expressed
MaizeGDB (Corn) Zm00025a043569
Brachypodium KQK06487
Barley HORVU1Hr1G063090.13 , HORVU1Hr1G063090.12 , HORVU1Hr1G063090.11 , HORVU1Hr1G063090.10 , HORVU1Hr1G063090.9 , HORVU1Hr1G063090.8 , HORVU1Hr1G063090.3 , HORVU1Hr1G063090.2 , HORVU1Hr1G063090.1 , HORVU1Hr1G063090.7 , HORVU1Hr1G063090.6 , HORVU1Hr1G063090.5 , HORVU1Hr1G063090.4
Wheat TraesCS1A02G244700 , TraesCS1A02G244700 , TraesCS1A02G244700 , TraesCS1D02G244400 , TraesCS1D02G244400 , TraesCS1B02G255900 , TraesCS1B02G255900 , TraesCS1B02G255900 , TraesCS1B02G255900
Populus PNT06260 , PNT06261 , PNT06262 , PNT06263


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cDNA sequences
Sobic.009G126000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
2 Sobic.002G127400 glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.009G213100 beta-galactosidase 8 precursor, putative, expressed K12309: GLB1, beta-galactosidase
4 Sobic.009G055400 expressed protein -
5 Sobic.005G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized PPR-repeat protein, putative, expressed -
6 Sobic.003G347300 TBC domain containing protein, expressed -
7 Sobic.010G099800 growth regulator related protein, putative, expressed -
8 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
9 Sobic.009G045200 double-stranded RNA binding motif containing protein, expressed -
10 Sobic.001G393700 expressed protein -
11 Sobic.006G173200 beige/BEACH domain containing protein, expressed -
12 Sobic.003G131200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
13 Sobic.001G507900 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
14 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
15 Sobic.003G199200 aspartic proteinase-like protein 2 precursor, putative, expressed -
16 Sobic.006G138000 expressed protein -
17 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
18 Sobic.001G018100 "qTGW3/GL3.3/TGW3(Ortholog in rice:Hu et al., 2018/Xia et al., 2018/Ying et al., 2018 )"(PubMedID : 31659830)@CGMC_GSK.5 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
19 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
20 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1


Gene co-expression network
sample Sobic009G126000 Sobic009G126000 Sobic010G106900 Sobic010G106900 Sobic009G126000--Sobic010G106900 Sobic002G127400 Sobic002G127400 Sobic009G126000--Sobic002G127400 Sobic009G213100 Sobic009G213100 Sobic009G126000--Sobic009G213100 Sobic009G055400 Sobic009G055400 Sobic009G126000--Sobic009G055400 Sobic005G059400 Sobic005G059400 Sobic009G126000--Sobic005G059400 Sobic003G347300 Sobic003G347300 Sobic009G126000--Sobic003G347300 Sobic010G099800 Sobic010G099800 Sobic009G126000--Sobic010G099800 Sobic005G216300 Sobic005G216300 Sobic009G126000--Sobic005G216300 Sobic009G045200 Sobic009G045200 Sobic009G126000--Sobic009G045200 Sobic010G147833 Sobic010G147833 Sobic010G106900--Sobic010G147833 Sobic003G126600 Sobic003G126600 Sobic010G106900--Sobic003G126600 Sobic002G260900 Sobic002G260900 Sobic010G106900--Sobic002G260900 Sobic001G017600 Sobic001G017600 Sobic010G106900--Sobic001G017600 Sobic008G133400 Sobic008G133400 Sobic010G106900--Sobic008G133400 Sobic008G083000 Sobic008G083000 Sobic010G106900--Sobic008G083000 Sobic007G203500 Sobic007G203500 Sobic010G106900--Sobic007G203500 Sobic002G392700 Sobic002G392700 Sobic010G106900--Sobic002G392700 Sobic002G301500 Sobic002G301500 Sobic010G106900--Sobic002G301500 Sobic001G338800 Sobic001G338800 Sobic002G127400--Sobic001G338800 Sobic003G294600 Sobic003G294600 Sobic002G127400--Sobic003G294600 Sobic003G435500 Sobic003G435500 Sobic002G127400--Sobic003G435500 Sobic002G127400--Sobic005G216300 Sobic001G335900 Sobic001G335900 Sobic002G127400--Sobic001G335900 Sobic001G518400 Sobic001G518400 Sobic002G127400--Sobic001G518400 Sobic009G142000 Sobic009G142000 Sobic002G127400--Sobic009G142000 Sobic010G138900 Sobic010G138900 Sobic002G127400--Sobic010G138900 Sobic003G314700 Sobic003G314700 Sobic002G127400--Sobic003G314700 Sobic002G409800 Sobic002G409800 Sobic009G213100--Sobic002G409800 Sobic002G076000 Sobic002G076000 Sobic009G213100--Sobic002G076000 Sobic001G507900 Sobic001G507900 Sobic009G213100--Sobic001G507900 Sobic009G213100--Sobic001G017600 Sobic009G062900 Sobic009G062900 Sobic009G213100--Sobic009G062900 Sobic003G070100 Sobic003G070100 Sobic009G213100--Sobic003G070100 Sobic002G079100 Sobic002G079100 Sobic009G213100--Sobic002G079100 Sobic006G215050 Sobic006G215050 Sobic009G213100--Sobic006G215050 Sobic006G217200 Sobic006G217200 Sobic009G213100--Sobic006G217200 Sobic001G366800 Sobic001G366800 Sobic009G055400--Sobic001G366800 Sobic006G056000 Sobic006G056000 Sobic009G055400--Sobic006G056000 Sobic009G096100 Sobic009G096100 Sobic009G055400--Sobic009G096100 Sobic004G232000 Sobic004G232000 Sobic009G055400--Sobic004G232000 Sobic003G131200 Sobic003G131200 Sobic009G055400--Sobic003G131200 Sobic009G055400--Sobic009G126000 Sobic009G055400--Sobic009G213100 Sobic002G192500 Sobic002G192500 Sobic009G055400--Sobic002G192500 Sobic009G253400 Sobic009G253400 Sobic009G055400--Sobic009G253400 Sobic001G334100 Sobic001G334100 Sobic005G059400--Sobic001G334100 Sobic003G259600 Sobic003G259600 Sobic005G059400--Sobic003G259600 Sobic002G218700 Sobic002G218700 Sobic005G059400--Sobic002G218700 Sobic001G347100 Sobic001G347100 Sobic005G059400--Sobic001G347100 Sobic006G180700 Sobic006G180700 Sobic005G059400--Sobic006G180700 Sobic005G199200 Sobic005G199200 Sobic005G059400--Sobic005G199200 Sobic004G036700 Sobic004G036700 Sobic005G059400--Sobic004G036700 Sobic002G132600 Sobic002G132600 Sobic005G059400--Sobic002G132600 Sobic003G184400 Sobic003G184400 Sobic005G059400--Sobic003G184400 Sobic003G347300--Sobic002G218700 Sobic001G021500 Sobic001G021500 Sobic003G347300--Sobic001G021500 Sobic002G033700 Sobic002G033700 Sobic003G347300--Sobic002G033700 Sobic003G347300--Sobic009G126000 Sobic006G254500 Sobic006G254500 Sobic003G347300--Sobic006G254500 Sobic009G030300 Sobic009G030300 Sobic003G347300--Sobic009G030300 Sobic009G013700 Sobic009G013700 Sobic003G347300--Sobic009G013700 Sobic009G123500 Sobic009G123500 Sobic003G347300--Sobic009G123500 Sobic008G086200 Sobic008G086200 Sobic003G347300--Sobic008G086200 Sobic001G393700 Sobic001G393700 Sobic010G099800--Sobic001G393700 Sobic003G240700 Sobic003G240700 Sobic010G099800--Sobic003G240700 Sobic001G474400 Sobic001G474400 Sobic010G099800--Sobic001G474400 Sobic010G099800--Sobic009G045200 Sobic003G405500 Sobic003G405500 Sobic010G099800--Sobic003G405500 Sobic010G278600 Sobic010G278600 Sobic010G099800--Sobic010G278600 Sobic010G099800--Sobic001G335900 Sobic001G051700 Sobic001G051700 Sobic010G099800--Sobic001G051700 Sobic002G430300 Sobic002G430300 Sobic010G099800--Sobic002G430300 Sobic003G099300 Sobic003G099300 Sobic005G216300--Sobic003G099300 Sobic007G027700 Sobic007G027700 Sobic005G216300--Sobic007G027700 Sobic004G039600 Sobic004G039600 Sobic005G216300--Sobic004G039600 Sobic001G369000 Sobic001G369000 Sobic005G216300--Sobic001G369000 Sobic005G216300--Sobic001G335900 Sobic001G426600 Sobic001G426600 Sobic005G216300--Sobic001G426600 Sobic001G142100 Sobic001G142100 Sobic005G216300--Sobic001G142100 Sobic005G216300--Sobic003G126600 Sobic006G208500 Sobic006G208500 Sobic005G216300--Sobic006G208500 Sobic009G045200--Sobic001G051700 Sobic003G416700 Sobic003G416700 Sobic009G045200--Sobic003G416700 Sobic009G045200--Sobic001G393700 Sobic006G224800 Sobic006G224800 Sobic009G045200--Sobic006G224800 Sobic009G045200--Sobic010G099800 Sobic007G187600 Sobic007G187600 Sobic009G045200--Sobic007G187600 Sobic009G045200--Sobic002G430300 Sobic009G045200--Sobic006G180700 Sobic009G045200--Sobic001G335900
Octagon: transcription factors


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