Gene annotation
Transcriptome id Sobic.003G199200.1,Sobic.003G199200.2,Sobic.003G199200.3
Synonym Sb03g026140
Functional annotation aspartic proteinase-like protein 2 precursor, putative, expressed
UniProt A0A1W0VY76 , A0A1W0VY66 , C5XPE3
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF375 PTHR13683:SF375 PTHR13683
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity GO:0004190aspartic-type endopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G05840 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os02g27360.2,LOC_Os02g27360.1 : aspartic proteinase-like protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020319 , Zm00025a020317 , Zm00025a033622 , Zm00025a028509
Brachypodium KQJ99261
Barley -
Wheat TraesCS2A02G275000 , TraesCS2D02G273200 , TraesCS2B02G291900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G393700 expressed protein -
2 Sobic.003G389300 cyclin-related protein, putative, expressed -
3 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
4 Sobic.010G017800 LMBR1 integral membrane protein, putative, expressed K14617: LMBR1 domain-containing protein 1
5 Sobic.002G327000 villin protein, putative, expressed -
6 Sobic.002G137400 protein binding protein, putative, expressed -
7 Sobic.001G163400 roothairless 1, putative, expressed -
8 Sobic.003G227100 adaptin, putative, expressed -
9 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -
10 Sobic.001G103300 calcium-transporting ATPase 3, endoplasmic reticulum-type, putative, expressed K05853: P-type Ca2+ transporter type 2A
11 Sobic.007G120500 Sec1 family transport protein, putative, expressed K12479: vacuolar protein sorting-associated protein 45
12 Sobic.001G335900 vacuolar protein sorting-associated protein 52, putative, expressed -
13 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
14 Sobic.001G426600 SH3 domain containing protein, expressed -
15 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
16 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
17 Sobic.006G138000 expressed protein -
18 Sobic.009G105900 amino acid permease family protein, putative, expressed K14427: SLC12A4_6, solute carrier family 12 (potassium/chloride transporter), member 4/6
19 Sobic.009G126000 mannosylglycoprotein endo-beta-mannosidase, putative, expressed K18577: mannosylglycoprotein endo-beta-mannosidase
20 Sobic.009G045200 double-stranded RNA binding motif containing protein, expressed -


Gene co-expression network
sample Sobic003G199200 Sobic003G199200 Sobic001G393700 Sobic001G393700 Sobic003G199200--Sobic001G393700 Sobic003G389300 Sobic003G389300 Sobic003G199200--Sobic003G389300 Sobic006G056200 Sobic006G056200 Sobic003G199200--Sobic006G056200 Sobic010G017800 Sobic010G017800 Sobic003G199200--Sobic010G017800 Sobic002G327000 Sobic002G327000 Sobic003G199200--Sobic002G327000 Sobic002G137400 Sobic002G137400 Sobic003G199200--Sobic002G137400 Sobic001G163400 Sobic001G163400 Sobic003G199200--Sobic001G163400 Sobic003G227100 Sobic003G227100 Sobic003G199200--Sobic003G227100 Sobic003G240700 Sobic003G240700 Sobic003G199200--Sobic003G240700 Sobic002G430300 Sobic002G430300 Sobic001G393700--Sobic002G430300 Sobic001G145400 Sobic001G145400 Sobic001G393700--Sobic001G145400 Sobic010G099800 Sobic010G099800 Sobic001G393700--Sobic010G099800 Sobic005G114800 Sobic005G114800 Sobic001G393700--Sobic005G114800 Sobic006G224800 Sobic006G224800 Sobic001G393700--Sobic006G224800 Sobic001G103300 Sobic001G103300 Sobic001G393700--Sobic001G103300 Sobic003G405500 Sobic003G405500 Sobic001G393700--Sobic003G405500 Sobic001G393700--Sobic003G240700 Sobic009G045200 Sobic009G045200 Sobic001G393700--Sobic009G045200 Sobic008G040700 Sobic008G040700 Sobic003G389300--Sobic008G040700 Sobic003G389300--Sobic003G199200 Sobic001G015800 Sobic001G015800 Sobic003G389300--Sobic001G015800 Sobic003G389300--Sobic001G163400 Sobic004G344901 Sobic004G344901 Sobic003G389300--Sobic004G344901 Sobic001G119800 Sobic001G119800 Sobic003G389300--Sobic001G119800 Sobic001G051700 Sobic001G051700 Sobic003G389300--Sobic001G051700 Sobic003G389300--Sobic003G227100 Sobic006G281000 Sobic006G281000 Sobic003G389300--Sobic006G281000 Sobic004G039600 Sobic004G039600 Sobic006G056200--Sobic004G039600 Sobic008G055900 Sobic008G055900 Sobic006G056200--Sobic008G055900 Sobic008G129600 Sobic008G129600 Sobic006G056200--Sobic008G129600 Sobic003G099300 Sobic003G099300 Sobic006G056200--Sobic003G099300 Sobic009G226400 Sobic009G226400 Sobic006G056200--Sobic009G226400 Sobic008G103300 Sobic008G103300 Sobic006G056200--Sobic008G103300 Sobic001G369000 Sobic001G369000 Sobic006G056200--Sobic001G369000 SobicK004100 SobicK004100 Sobic006G056200--SobicK004100 Sobic002G029300 Sobic002G029300 Sobic006G056200--Sobic002G029300 Sobic002G313500 Sobic002G313500 Sobic010G017800--Sobic002G313500 Sobic001G518400 Sobic001G518400 Sobic010G017800--Sobic001G518400 Sobic008G139700 Sobic008G139700 Sobic010G017800--Sobic008G139700 Sobic001G335900 Sobic001G335900 Sobic010G017800--Sobic001G335900 Sobic009G229600 Sobic009G229600 Sobic010G017800--Sobic009G229600 Sobic004G325400 Sobic004G325400 Sobic010G017800--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic010G017800--Sobic005G216300 Sobic001G371200 Sobic001G371200 Sobic010G017800--Sobic001G371200 Sobic003G340900 Sobic003G340900 Sobic010G017800--Sobic003G340900 Sobic002G327000--Sobic004G344901 Sobic003G144300 Sobic003G144300 Sobic002G327000--Sobic003G144300 Sobic009G105900 Sobic009G105900 Sobic002G327000--Sobic009G105900 Sobic008G124800 Sobic008G124800 Sobic002G327000--Sobic008G124800 Sobic001G426600 Sobic001G426600 Sobic002G327000--Sobic001G426600 Sobic002G327000--Sobic003G227100 Sobic003G337300 Sobic003G337300 Sobic002G327000--Sobic003G337300 Sobic002G327000--Sobic001G163400 Sobic002G327000--Sobic001G051700 Sobic001G415300 Sobic001G415300 Sobic002G137400--Sobic001G415300 Sobic004G002100 Sobic004G002100 Sobic002G137400--Sobic004G002100 Sobic010G004100 Sobic010G004100 Sobic002G137400--Sobic010G004100 Sobic002G137400--Sobic003G337300 Sobic003G331400 Sobic003G331400 Sobic002G137400--Sobic003G331400 Sobic001G281100 Sobic001G281100 Sobic002G137400--Sobic001G281100 Sobic004G004300 Sobic004G004300 Sobic002G137400--Sobic004G004300 Sobic001G534800 Sobic001G534800 Sobic002G137400--Sobic001G534800 Sobic002G031100 Sobic002G031100 Sobic002G137400--Sobic002G031100 Sobic001G163400--Sobic004G344901 Sobic001G163400--Sobic003G337300 Sobic001G163400--Sobic001G015800 Sobic006G131000 Sobic006G131000 Sobic001G163400--Sobic006G131000 Sobic001G163400--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic001G163400--Sobic001G096000 Sobic001G163400--Sobic001G415300 Sobic001G124200 Sobic001G124200 Sobic001G163400--Sobic001G124200 Sobic006G163800 Sobic006G163800 Sobic001G163400--Sobic006G163800 Sobic003G227100--Sobic006G224800 Sobic005G110499 Sobic005G110499 Sobic003G227100--Sobic005G110499 Sobic003G227100--Sobic003G240700 Sobic003G227100--Sobic001G369000 Sobic003G050900 Sobic003G050900 Sobic003G227100--Sobic003G050900 Sobic004G261600 Sobic004G261600 Sobic003G227100--Sobic004G261600 Sobic003G227100--Sobic008G040700 Sobic003G227100--Sobic006G056200 Sobic003G209200 Sobic003G209200 Sobic003G227100--Sobic003G209200 Sobic003G240700--Sobic001G369000 Sobic003G240700--Sobic001G335900 Sobic001G170100 Sobic001G170100 Sobic003G240700--Sobic001G170100 Sobic006G138000 Sobic006G138000 Sobic003G240700--Sobic006G138000 Sobic003G314700 Sobic003G314700 Sobic003G240700--Sobic003G314700 Sobic003G293000 Sobic003G293000 Sobic003G240700--Sobic003G293000 Sobic009G049400 Sobic009G049400 Sobic003G240700--Sobic009G049400 Sobic003G240700--Sobic001G426600 Sobic003G240700--Sobic003G227100
Octagon: transcription factors


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