Gene annotation
Transcriptome id Sobic.009G055400.1
Synonym Sb09g004670
Functional annotation expressed protein
UniProt C5Z0P0
Pfam -
Panther DB PTHR34121 PTHR34121:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13560 : -
RAP-DB (Rice) LOC_Os05g06980.1 : expressed protein
MaizeGDB (Corn) Zm00025a042938
Brachypodium KQK07347
Barley HORVU3Hr1G024990.3 , HORVU3Hr1G024990.5 , HORVU3Hr1G024990.6
Wheat TraesCS1A02G108300 , TraesCS1A02G108300 , TraesCS1D02G110700 , TraesCS1D02G110700 , TraesCS1B02G130500 , TraesCS3B02G151400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
2 Sobic.006G056000 OsFBL16 - F-box domain and LRR containing protein, expressed -
3 Sobic.009G096100 endoribonuclease Dicer, putative, expressed -
4 Sobic.004G232000 TLD family protein, putative, expressed -
5 Sobic.003G131200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
6 Sobic.009G126000 mannosylglycoprotein endo-beta-mannosidase, putative, expressed K18577: mannosylglycoprotein endo-beta-mannosidase
7 Sobic.009G213100 beta-galactosidase 8 precursor, putative, expressed K12309: GLB1, beta-galactosidase
8 Sobic.002G192500 ES43 protein, putative, expressed -
9 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
10 Sobic.009G081500 per1-like family protein, putative, expressed -
11 Sobic.002G127400 glycosyl hydrolase family 10 protein, putative, expressed -
12 Sobic.002G409800 xylose isomerase, putative, expressed K01805: xylose isomerase
13 Sobic.009G235200 ribosomal RNA large subunit methyltransferase J, putative, expressed K14857: SPB1, AdoMet-dependent rRNA methyltransferase SPB1
14 Sobic.001G507900 methyltransferase, putative, expressed K00599: methyltransferase-like protein 6
15 Sobic.010G106900 NAD binding domain of 6-phosphogluconate dehydrogenase containing protein, expressed -
16 Sobic.004G149800 transcriptional derepression of gliadins and low-molecular-weight glutenins (LMWgs) by active demethylation of their promoters(PubMedID : 23184965)@hhH-GPD superfamily base excision DNA repair protein, expressed -
17 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
18 Sobic.006G047100 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
19 Sobic.001G138400 crooked neck, putative, expressed K12869: CRN, CRNKL1, CLF1, crooked neck
20 Sobic.004G036700 arginine N-methyltransferase 5, putative, expressed K02516: PRMT5, type II protein arginine methyltransferase


Gene co-expression network
sample Sobic009G055400 Sobic009G055400 Sobic001G366800 Sobic001G366800 Sobic009G055400--Sobic001G366800 Sobic006G056000 Sobic006G056000 Sobic009G055400--Sobic006G056000 Sobic009G096100 Sobic009G096100 Sobic009G055400--Sobic009G096100 Sobic004G232000 Sobic004G232000 Sobic009G055400--Sobic004G232000 Sobic003G131200 Sobic003G131200 Sobic009G055400--Sobic003G131200 Sobic009G126000 Sobic009G126000 Sobic009G055400--Sobic009G126000 Sobic009G213100 Sobic009G213100 Sobic009G055400--Sobic009G213100 Sobic002G192500 Sobic002G192500 Sobic009G055400--Sobic002G192500 Sobic009G253400 Sobic009G253400 Sobic009G055400--Sobic009G253400 Sobic001G366800--Sobic009G055400 Sobic001G215900 Sobic001G215900 Sobic001G366800--Sobic001G215900 Sobic002G301500 Sobic002G301500 Sobic001G366800--Sobic002G301500 Sobic004G134100 Sobic004G134100 Sobic001G366800--Sobic004G134100 Sobic006G177300 Sobic006G177300 Sobic001G366800--Sobic006G177300 Sobic004G247300 Sobic004G247300 Sobic001G366800--Sobic004G247300 Sobic002G393200 Sobic002G393200 Sobic001G366800--Sobic002G393200 Sobic010G138500 Sobic010G138500 Sobic001G366800--Sobic010G138500 Sobic010G242900 Sobic010G242900 Sobic001G366800--Sobic010G242900 Sobic003G353600 Sobic003G353600 Sobic006G056000--Sobic003G353600 Sobic002G076000 Sobic002G076000 Sobic006G056000--Sobic002G076000 Sobic005G084100 Sobic005G084100 Sobic006G056000--Sobic005G084100 Sobic004G111000 Sobic004G111000 Sobic006G056000--Sobic004G111000 Sobic002G079100 Sobic002G079100 Sobic006G056000--Sobic002G079100 Sobic001G138400 Sobic001G138400 Sobic006G056000--Sobic001G138400 Sobic004G285000 Sobic004G285000 Sobic006G056000--Sobic004G285000 Sobic006G047100 Sobic006G047100 Sobic006G056000--Sobic006G047100 Sobic006G210000 Sobic006G210000 Sobic006G056000--Sobic006G210000 Sobic008G056900 Sobic008G056900 Sobic009G096100--Sobic008G056900 Sobic009G096100--Sobic002G192500 Sobic010G157700 Sobic010G157700 Sobic009G096100--Sobic010G157700 Sobic001G485600 Sobic001G485600 Sobic009G096100--Sobic001G485600 Sobic009G096100--Sobic006G056000 Sobic007G043900 Sobic007G043900 Sobic009G096100--Sobic007G043900 Sobic002G344500 Sobic002G344500 Sobic009G096100--Sobic002G344500 Sobic002G380100 Sobic002G380100 Sobic009G096100--Sobic002G380100 Sobic007G077700 Sobic007G077700 Sobic009G096100--Sobic007G077700 Sobic001G087100 Sobic001G087100 Sobic004G232000--Sobic001G087100 Sobic004G232000--Sobic007G043900 Sobic009G030300 Sobic009G030300 Sobic004G232000--Sobic009G030300 Sobic004G232000--Sobic002G076000 Sobic002G259800 Sobic002G259800 Sobic004G232000--Sobic002G259800 Sobic004G232000--Sobic005G084100 Sobic001G043400 Sobic001G043400 Sobic004G232000--Sobic001G043400 Sobic009G040800 Sobic009G040800 Sobic004G232000--Sobic009G040800 Sobic005G009200 Sobic005G009200 Sobic004G232000--Sobic005G009200 Sobic010G099800 Sobic010G099800 Sobic003G131200--Sobic010G099800 Sobic003G131200--Sobic002G393200 Sobic002G218700 Sobic002G218700 Sobic003G131200--Sobic002G218700 Sobic006G173200 Sobic006G173200 Sobic003G131200--Sobic006G173200 Sobic003G131200--Sobic009G055400 Sobic001G170100 Sobic001G170100 Sobic003G131200--Sobic001G170100 Sobic003G131200--Sobic009G126000 Sobic003G131200--Sobic004G232000 Sobic010G147833 Sobic010G147833 Sobic003G131200--Sobic010G147833 Sobic010G106900 Sobic010G106900 Sobic009G126000--Sobic010G106900 Sobic002G127400 Sobic002G127400 Sobic009G126000--Sobic002G127400 Sobic009G126000--Sobic009G213100 Sobic009G126000--Sobic009G055400 Sobic005G059400 Sobic005G059400 Sobic009G126000--Sobic005G059400 Sobic003G347300 Sobic003G347300 Sobic009G126000--Sobic003G347300 Sobic009G126000--Sobic010G099800 Sobic005G216300 Sobic005G216300 Sobic009G126000--Sobic005G216300 Sobic009G045200 Sobic009G045200 Sobic009G126000--Sobic009G045200 Sobic002G409800 Sobic002G409800 Sobic009G213100--Sobic002G409800 Sobic009G213100--Sobic002G076000 Sobic001G507900 Sobic001G507900 Sobic009G213100--Sobic001G507900 Sobic001G017600 Sobic001G017600 Sobic009G213100--Sobic001G017600 Sobic009G062900 Sobic009G062900 Sobic009G213100--Sobic009G062900 Sobic003G070100 Sobic003G070100 Sobic009G213100--Sobic003G070100 Sobic009G213100--Sobic002G079100 Sobic006G215050 Sobic006G215050 Sobic009G213100--Sobic006G215050 Sobic006G217200 Sobic006G217200 Sobic009G213100--Sobic006G217200 Sobic002G192500--Sobic009G096100 Sobic002G192500--Sobic006G056000 Sobic002G192500--Sobic006G047100 Sobic006G111200 Sobic006G111200 Sobic002G192500--Sobic006G111200 Sobic010G050700 Sobic010G050700 Sobic002G192500--Sobic010G050700 Sobic002G192500--Sobic007G043900 Sobic002G192500--Sobic008G056900 Sobic002G192500--Sobic001G087100 Sobic002G192500--Sobic001G485600 Sobic009G253400--Sobic002G218700 Sobic010G170900 Sobic010G170900 Sobic009G253400--Sobic010G170900 Sobic001G261585 Sobic001G261585 Sobic009G253400--Sobic001G261585 Sobic008G007000 Sobic008G007000 Sobic009G253400--Sobic008G007000 Sobic002G183300 Sobic002G183300 Sobic009G253400--Sobic002G183300 Sobic009G253400--Sobic009G055400 Sobic009G253400--Sobic003G347300 Sobic001G372900 Sobic001G372900 Sobic009G253400--Sobic001G372900 Sobic002G132600 Sobic002G132600 Sobic009G253400--Sobic002G132600
Octagon: transcription factors


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