Gene annotation
Transcriptome id Sobic.009G081500.2,Sobic.009G081500.1
Synonym Sb09g007170
Functional annotation per1-like family protein, putative, expressed
UniProt A0A1B6P7D2
Pfam PF04080
Panther DB PTHR13148 PTHR13148:SF2
NCBI CDD KOG2970; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16560 : Per1-like family protein
RAP-DB (Rice) LOC_Os05g13330.1 : per1-like family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056265 , Zm00025a011052
Brachypodium KQK14402 , KQK14403
Barley HORVU4Hr1G088840.2 , HORVU4Hr1G088840.1
Wheat TraesCS5D02G519700
Populus -


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cDNA sequences
Sobic.009G081500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
2 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
3 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
4 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
5 Sobic.006G251600 exosome complex exonuclease rrp4, putative, expressed K03679: RRP4, exosome complex component RRP4
6 Sobic.007G188600 tRNA synthetase class II core domain containing protein, expressed K01880: GARS, glycyl-tRNA synthetase
7 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
8 Sobic.001G004200 uncharacterized protein yeiN, putative, expressed K16329: pseudouridylate synthase
9 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
10 Sobic.009G055400 expressed protein -
11 Sobic.003G445000 pectinacetylesterase domain containing protein, expressed -
12 Sobic.004G173100 exosome complex exonuclease, putative, expressed K03678: RRP45, exosome complex component RRP45
13 Sobic.001G432300 imidazole glycerol phosphate synthase hisHF, chloroplast precursor, putative, expressed K01663: imidazole glycerol-phosphate synthase
14 Sobic.002G365900 WD repeat-containing protein 12, putative, expressed K14863: WDR12, ribosome biogenesis protein
15 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -
16 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
17 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
18 Sobic.003G099300 expressed protein K18749: LSM14, RAP55, protein LSM14
19 Sobic.001G008500 metallo-beta-lactamase, putative, expressed K14403: CPSF3, cleavage and polyadenylation specificity factor subunit 3
20 Sobic.004G249300 proteasome subunit, putative, expressed K15030: translation initiation factor 3 subunit M


Gene co-expression network
sample Sobic009G081500 Sobic009G081500 Sobic008G083400 Sobic008G083400 Sobic009G081500--Sobic008G083400 Sobic006G281500 Sobic006G281500 Sobic009G081500--Sobic006G281500 Sobic009G151800 Sobic009G151800 Sobic009G081500--Sobic009G151800 Sobic001G460500 Sobic001G460500 Sobic009G081500--Sobic001G460500 Sobic006G251600 Sobic006G251600 Sobic009G081500--Sobic006G251600 Sobic007G188600 Sobic007G188600 Sobic009G081500--Sobic007G188600 Sobic002G423500 Sobic002G423500 Sobic009G081500--Sobic002G423500 Sobic001G004200 Sobic001G004200 Sobic009G081500--Sobic001G004200 Sobic006G208400 Sobic006G208400 Sobic009G081500--Sobic006G208400 Sobic008G083400--Sobic006G251600 Sobic001G432300 Sobic001G432300 Sobic008G083400--Sobic001G432300 Sobic001G371100 Sobic001G371100 Sobic008G083400--Sobic001G371100 Sobic004G249300 Sobic004G249300 Sobic008G083400--Sobic004G249300 Sobic008G083400--Sobic009G081500 Sobic002G110400 Sobic002G110400 Sobic008G083400--Sobic002G110400 Sobic007G171200 Sobic007G171200 Sobic008G083400--Sobic007G171200 Sobic001G008500 Sobic001G008500 Sobic008G083400--Sobic001G008500 Sobic003G407800 Sobic003G407800 Sobic008G083400--Sobic003G407800 Sobic001G263000 Sobic001G263000 Sobic006G281500--Sobic001G263000 Sobic009G227900 Sobic009G227900 Sobic006G281500--Sobic009G227900 Sobic006G281500--Sobic009G081500 Sobic002G317300 Sobic002G317300 Sobic006G281500--Sobic002G317300 Sobic005G105500 Sobic005G105500 Sobic006G281500--Sobic005G105500 Sobic002G259400 Sobic002G259400 Sobic006G281500--Sobic002G259400 Sobic006G281500--Sobic007G188600 Sobic003G119400 Sobic003G119400 Sobic006G281500--Sobic003G119400 Sobic010G085200 Sobic010G085200 Sobic006G281500--Sobic010G085200 Sobic009G151800--Sobic009G081500 Sobic009G151800--Sobic001G460500 Sobic002G264300 Sobic002G264300 Sobic009G151800--Sobic002G264300 Sobic003G259600 Sobic003G259600 Sobic009G151800--Sobic003G259600 Sobic004G075200 Sobic004G075200 Sobic009G151800--Sobic004G075200 Sobic002G356600 Sobic002G356600 Sobic009G151800--Sobic002G356600 Sobic004G356200 Sobic004G356200 Sobic009G151800--Sobic004G356200 Sobic005G031000 Sobic005G031000 Sobic009G151800--Sobic005G031000 Sobic006G157000 Sobic006G157000 Sobic009G151800--Sobic006G157000 Sobic005G163700 Sobic005G163700 Sobic001G460500--Sobic005G163700 Sobic001G460500--Sobic002G423500 Sobic002G014400 Sobic002G014400 Sobic001G460500--Sobic002G014400 Sobic004G208500 Sobic004G208500 Sobic001G460500--Sobic004G208500 Sobic010G081700 Sobic010G081700 Sobic001G460500--Sobic010G081700 Sobic004G047200 Sobic004G047200 Sobic001G460500--Sobic004G047200 Sobic002G412700 Sobic002G412700 Sobic001G460500--Sobic002G412700 Sobic001G251600 Sobic001G251600 Sobic001G460500--Sobic001G251600 Sobic003G099300 Sobic003G099300 Sobic001G460500--Sobic003G099300 Sobic009G071700 Sobic009G071700 Sobic006G251600--Sobic009G071700 Sobic002G365900 Sobic002G365900 Sobic006G251600--Sobic002G365900 Sobic006G225400 Sobic006G225400 Sobic006G251600--Sobic006G225400 Sobic006G251600--Sobic001G008500 Sobic006G251600--Sobic008G083400 Sobic006G198600 Sobic006G198600 Sobic006G251600--Sobic006G198600 Sobic010G205900 Sobic010G205900 Sobic006G251600--Sobic010G205900 Sobic004G173100 Sobic004G173100 Sobic006G251600--Sobic004G173100 Sobic006G251600--Sobic001G371100 Sobic007G188600--Sobic006G198600 Sobic007G188600--Sobic006G281500 Sobic002G402500 Sobic002G402500 Sobic007G188600--Sobic002G402500 Sobic007G188600--Sobic002G423500 Sobic010G161525 Sobic010G161525 Sobic007G188600--Sobic010G161525 Sobic007G188600--Sobic006G251600 Sobic007G188600--Sobic006G157000 Sobic007G188600--Sobic009G081500 Sobic007G188600--Sobic008G083400 Sobic002G423500--Sobic005G163700 Sobic002G423500--Sobic004G047200 Sobic002G423500--Sobic002G014400 Sobic002G423500--Sobic001G460500 Sobic004G326600 Sobic004G326600 Sobic002G423500--Sobic004G326600 Sobic004G215700 Sobic004G215700 Sobic002G423500--Sobic004G215700 Sobic001G522000 Sobic001G522000 Sobic002G423500--Sobic001G522000 Sobic006G041100 Sobic006G041100 Sobic002G423500--Sobic006G041100 Sobic001G467100 Sobic001G467100 Sobic002G423500--Sobic001G467100 Sobic002G408900 Sobic002G408900 Sobic001G004200--Sobic002G408900 Sobic003G405500 Sobic003G405500 Sobic001G004200--Sobic003G405500 Sobic001G004200--Sobic004G208500 Sobic001G474400 Sobic001G474400 Sobic001G004200--Sobic001G474400 Sobic002G125800 Sobic002G125800 Sobic001G004200--Sobic002G125800 Sobic001G015400 Sobic001G015400 Sobic001G004200--Sobic001G015400 Sobic002G199400 Sobic002G199400 Sobic001G004200--Sobic002G199400 Sobic004G283600 Sobic004G283600 Sobic001G004200--Sobic004G283600 Sobic010G179700 Sobic010G179700 Sobic001G004200--Sobic010G179700 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic008G017100 Sobic008G017100 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic001G408300 Sobic001G408300 Sobic006G208400--Sobic001G408300 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic002G427300 Sobic002G427300 Sobic006G208400--Sobic002G427300 Sobic003G314700 Sobic003G314700 Sobic006G208400--Sobic003G314700
Octagon: transcription factors


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