Gene annotation
Transcriptome id Sobic.003G313400.1,Sobic.003G313400.2
Synonym Sb03g036130
Functional annotation expressed protein
UniProt A0A1W0VZR9 , C5XLL4
Pfam PF04576
Panther DB PTHR31448 PTHR31448:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G08800 : Protein of unknown function, DUF593
RAP-DB (Rice) LOC_Os01g56790.1 : expressed protein
MaizeGDB (Corn) Zm00025a027339
Brachypodium KQK10013 , KQK10012 , KQK10011 , KQK10016 , KQK10015 , KQK10014
Barley HORVU3Hr1G075790.8 , HORVU3Hr1G075790.7 , HORVU3Hr1G075790.1 , HORVU3Hr1G075790.3 , HORVU3Hr1G075790.2
Wheat TraesCS3D02G309900 , TraesCS3D02G309900 , TraesCS3D02G309900 , TraesCS3B02G343400 , TraesCS3B02G343400 , TraesCS3B02G343400 , TraesCS3A02G321400 , TraesCS3A02G321400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G358400 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
2 Sobic.007G203500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor, putative, expressed -
3 Sobic.004G002400 expressed protein -
4 Sobic.003G331400 expressed protein -
5 Sobic.004G354400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
6 Sobic.004G002100 G-protein alpha subunit, putative, expressed -
7 Sobic.009G229600 tRNA-binding arm, putative, expressed -
8 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
9 Sobic.006G245400 -(PubMedID : 34525227)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
10 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
11 Sobic.003G370200 ion channel DMI1, chloroplast precursor, putative, expressed -
12 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
13 Sobic.003G427600 villin protein, putative, expressed -
14 Sobic.007G128600 CC-NBS-LRR protein, putative, expressed -
15 Sobic.008G123500 auxilin, putative, expressed -
16 Sobic.001G281100 START domain containing protein, expressed -
17 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
18 Sobic.003G036900 glycine-rich protein, putative, expressed -
19 Sobic.003G126600 rab GDP dissociation inhibitor alpha, putative, expressed -
20 Sobic.001G411800 - -


Gene co-expression network
sample Sobic003G313400 Sobic003G313400 Sobic004G358400 Sobic004G358400 Sobic003G313400--Sobic004G358400 Sobic007G203500 Sobic007G203500 Sobic003G313400--Sobic007G203500 Sobic004G002400 Sobic004G002400 Sobic003G313400--Sobic004G002400 Sobic003G331400 Sobic003G331400 Sobic003G313400--Sobic003G331400 Sobic004G354400 Sobic004G354400 Sobic003G313400--Sobic004G354400 Sobic004G002100 Sobic004G002100 Sobic003G313400--Sobic004G002100 Sobic009G229600 Sobic009G229600 Sobic003G313400--Sobic009G229600 Sobic005G026200 Sobic005G026200 Sobic003G313400--Sobic005G026200 Sobic006G245400 Sobic006G245400 Sobic003G313400--Sobic006G245400 Sobic004G004300 Sobic004G004300 Sobic004G358400--Sobic004G004300 Sobic004G358400--Sobic005G026200 Sobic001G281100 Sobic001G281100 Sobic004G358400--Sobic001G281100 Sobic010G275500 Sobic010G275500 Sobic004G358400--Sobic010G275500 Sobic001G534800 Sobic001G534800 Sobic004G358400--Sobic001G534800 Sobic004G358400--Sobic003G331400 Sobic004G344901 Sobic004G344901 Sobic004G358400--Sobic004G344901 Sobic001G196500 Sobic001G196500 Sobic004G358400--Sobic001G196500 Sobic001G251200 Sobic001G251200 Sobic004G358400--Sobic001G251200 Sobic010G017800 Sobic010G017800 Sobic007G203500--Sobic010G017800 Sobic003G126600 Sobic003G126600 Sobic007G203500--Sobic003G126600 Sobic003G401000 Sobic003G401000 Sobic007G203500--Sobic003G401000 Sobic006G052500 Sobic006G052500 Sobic007G203500--Sobic006G052500 Sobic001G539016 Sobic001G539016 Sobic007G203500--Sobic001G539016 Sobic007G203500--Sobic003G313400 Sobic009G257800 Sobic009G257800 Sobic007G203500--Sobic009G257800 Sobic007G203500--Sobic009G229600 Sobic010G106900 Sobic010G106900 Sobic007G203500--Sobic010G106900 Sobic004G002400--Sobic001G281100 Sobic004G039600 Sobic004G039600 Sobic004G002400--Sobic004G039600 Sobic003G187500 Sobic003G187500 Sobic004G002400--Sobic003G187500 Sobic007G132100 Sobic007G132100 Sobic004G002400--Sobic007G132100 Sobic006G126100 Sobic006G126100 Sobic004G002400--Sobic006G126100 Sobic001G124200 Sobic001G124200 Sobic004G002400--Sobic001G124200 Sobic001G466700 Sobic001G466700 Sobic004G002400--Sobic001G466700 Sobic009G249200 Sobic009G249200 Sobic004G002400--Sobic009G249200 Sobic004G002400--Sobic001G534800 Sobic003G331400--Sobic004G344901 Sobic002G137400 Sobic002G137400 Sobic003G331400--Sobic002G137400 Sobic001G415300 Sobic001G415300 Sobic003G331400--Sobic001G415300 Sobic003G331400--Sobic004G358400 Sobic003G331400--Sobic004G004300 Sobic002G031100 Sobic002G031100 Sobic003G331400--Sobic002G031100 Sobic003G331400--Sobic005G026200 Sobic010G004100 Sobic010G004100 Sobic003G331400--Sobic010G004100 Sobic001G163400 Sobic001G163400 Sobic003G331400--Sobic001G163400 Sobic004G354400--Sobic003G313400 Sobic004G295800 Sobic004G295800 Sobic004G354400--Sobic004G295800 Sobic010G250200 Sobic010G250200 Sobic004G354400--Sobic010G250200 Sobic001G359400 Sobic001G359400 Sobic004G354400--Sobic001G359400 Sobic010G078100 Sobic010G078100 Sobic004G354400--Sobic010G078100 Sobic010G188400 Sobic010G188400 Sobic004G354400--Sobic010G188400 Sobic008G191100 Sobic008G191100 Sobic004G354400--Sobic008G191100 Sobic003G179600 Sobic003G179600 Sobic004G354400--Sobic003G179600 Sobic004G163300 Sobic004G163300 Sobic004G354400--Sobic004G163300 Sobic004G002100--Sobic002G137400 Sobic004G002100--Sobic001G534800 Sobic004G002100--Sobic002G031100 Sobic004G002100--Sobic001G415300 Sobic004G002100--Sobic001G281100 Sobic004G002100--Sobic004G002400 Sobic001G413900 Sobic001G413900 Sobic004G002100--Sobic001G413900 Sobic004G002100--Sobic006G126100 Sobic004G002100--Sobic004G004300 Sobic009G049400 Sobic009G049400 Sobic009G229600--Sobic009G049400 Sobic001G369000 Sobic001G369000 Sobic009G229600--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic009G229600--Sobic001G335900 Sobic003G427600 Sobic003G427600 Sobic009G229600--Sobic003G427600 Sobic003G270600 Sobic003G270600 Sobic009G229600--Sobic003G270600 Sobic006G202200 Sobic006G202200 Sobic009G229600--Sobic006G202200 Sobic001G518400 Sobic001G518400 Sobic009G229600--Sobic001G518400 Sobic009G229600--Sobic004G039600 Sobic007G120500 Sobic007G120500 Sobic009G229600--Sobic007G120500 Sobic005G026200--Sobic004G004300 Sobic005G026200--Sobic001G534800 Sobic005G026200--Sobic001G281100 Sobic005G003300 Sobic005G003300 Sobic005G026200--Sobic005G003300 Sobic002G397500 Sobic002G397500 Sobic005G026200--Sobic002G397500 Sobic010G053800 Sobic010G053800 Sobic005G026200--Sobic010G053800 Sobic003G072200 Sobic003G072200 Sobic005G026200--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic005G026200--Sobic001G065000 Sobic004G113400 Sobic004G113400 Sobic005G026200--Sobic004G113400 Sobic002G340100 Sobic002G340100 Sobic006G245400--Sobic002G340100 Sobic007G172400 Sobic007G172400 Sobic006G245400--Sobic007G172400 Sobic004G052900 Sobic004G052900 Sobic006G245400--Sobic004G052900 Sobic006G245400--Sobic004G113400 Sobic001G114000 Sobic001G114000 Sobic006G245400--Sobic001G114000 Sobic006G237400 Sobic006G237400 Sobic006G245400--Sobic006G237400 Sobic007G217000 Sobic007G217000 Sobic006G245400--Sobic007G217000 Sobic006G245400--Sobic001G065000 Sobic001G474600 Sobic001G474600 Sobic006G245400--Sobic001G474600
Octagon: transcription factors


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