Gene annotation
Transcriptome id Sobic.007G128600.1,Sobic.007G128600.2
Synonym
Functional annotation CC-NBS-LRR protein, putative, expressed
UniProt A0A1B6PHJ0 , A0A1Z5R9K1
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF625
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g24170.1 : CC-NBS-LRR protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G006430.2 , HORVU3Hr1G006430.3 , HORVU3Hr1G006430.1 , HORVU3Hr1G006430.6 , HORVU3Hr1G006430.4 , HORVU3Hr1G006430.5
Wheat TraesCS7D02G537100 , TraesCS3A02G047600 , TraesCS3B02G035100 , TraesCS3D02G039500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G313400 expressed protein -
2 Sobic.010G188400 copine-1, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
3 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
4 Sobic.001G411800 - -
5 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
6 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
7 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -
8 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
9 Sobic.002G398100 RGH1A, putative, expressed -
10 Sobic.001G322700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@5-oxoprolinase, putative, expressed K01469: OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
11 Sobic.006G157700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolase family 3 protein, putative, expressed -
12 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -
13 Sobic.001G017600 protein of unknown function containing protein, expressed -
14 Sobic.003G241500 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
15 Sobic.007G202600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pumilio domain-containing protein PPD1, putative, expressed K17943: pumilio RNA-binding family
16 Sobic.003G061800 glutaryl-CoA dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
17 Sobic.002G188500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
18 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
19 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
20 Sobic.001G394600 expressed protein -


Gene co-expression network
sample Sobic007G128600 Sobic007G128600 Sobic003G313400 Sobic003G313400 Sobic007G128600--Sobic003G313400 Sobic010G188400 Sobic010G188400 Sobic007G128600--Sobic010G188400 Sobic009G057300 Sobic009G057300 Sobic007G128600--Sobic009G057300 Sobic001G411800 Sobic001G411800 Sobic007G128600--Sobic001G411800 Sobic004G339100 Sobic004G339100 Sobic007G128600--Sobic004G339100 Sobic004G127700 Sobic004G127700 Sobic007G128600--Sobic004G127700 Sobic001G328000 Sobic001G328000 Sobic007G128600--Sobic001G328000 Sobic003G428400 Sobic003G428400 Sobic007G128600--Sobic003G428400 Sobic002G398100 Sobic002G398100 Sobic007G128600--Sobic002G398100 Sobic004G358400 Sobic004G358400 Sobic003G313400--Sobic004G358400 Sobic007G203500 Sobic007G203500 Sobic003G313400--Sobic007G203500 Sobic004G002400 Sobic004G002400 Sobic003G313400--Sobic004G002400 Sobic003G331400 Sobic003G331400 Sobic003G313400--Sobic003G331400 Sobic004G354400 Sobic004G354400 Sobic003G313400--Sobic004G354400 Sobic004G002100 Sobic004G002100 Sobic003G313400--Sobic004G002100 Sobic009G229600 Sobic009G229600 Sobic003G313400--Sobic009G229600 Sobic005G026200 Sobic005G026200 Sobic003G313400--Sobic005G026200 Sobic006G245400 Sobic006G245400 Sobic003G313400--Sobic006G245400 Sobic010G274500 Sobic010G274500 Sobic010G188400--Sobic010G274500 Sobic007G202600 Sobic007G202600 Sobic010G188400--Sobic007G202600 Sobic008G147700 Sobic008G147700 Sobic010G188400--Sobic008G147700 Sobic001G120300 Sobic001G120300 Sobic010G188400--Sobic001G120300 Sobic001G427100 Sobic001G427100 Sobic010G188400--Sobic001G427100 Sobic003G145900 Sobic003G145900 Sobic010G188400--Sobic003G145900 Sobic003G305200 Sobic003G305200 Sobic010G188400--Sobic003G305200 Sobic009G148300 Sobic009G148300 Sobic010G188400--Sobic009G148300 Sobic002G303000 Sobic002G303000 Sobic010G188400--Sobic002G303000 Sobic003G061800 Sobic003G061800 Sobic009G057300--Sobic003G061800 Sobic001G474500 Sobic001G474500 Sobic009G057300--Sobic001G474500 Sobic007G068100 Sobic007G068100 Sobic009G057300--Sobic007G068100 Sobic001G325200 Sobic001G325200 Sobic009G057300--Sobic001G325200 Sobic003G388251 Sobic003G388251 Sobic009G057300--Sobic003G388251 Sobic003G329400 Sobic003G329400 Sobic009G057300--Sobic003G329400 Sobic003G354400 Sobic003G354400 Sobic009G057300--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G057300--Sobic001G334600 Sobic001G322700 Sobic001G322700 Sobic009G057300--Sobic001G322700 Sobic001G411800--Sobic006G245400 Sobic004G113400 Sobic004G113400 Sobic001G411800--Sobic004G113400 Sobic002G179900 Sobic002G179900 Sobic001G411800--Sobic002G179900 Sobic002G270500 Sobic002G270500 Sobic001G411800--Sobic002G270500 Sobic001G534800 Sobic001G534800 Sobic001G411800--Sobic001G534800 Sobic004G052900 Sobic004G052900 Sobic001G411800--Sobic004G052900 Sobic005G003300 Sobic005G003300 Sobic001G411800--Sobic005G003300 Sobic001G411800--Sobic004G339100 Sobic004G355000 Sobic004G355000 Sobic001G411800--Sobic004G355000 Sobic004G339100--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic004G339100--Sobic009G010600 Sobic004G329400 Sobic004G329400 Sobic004G339100--Sobic004G329400 Sobic007G024700 Sobic007G024700 Sobic004G339100--Sobic007G024700 Sobic003G287100 Sobic003G287100 Sobic004G339100--Sobic003G287100 Sobic008G099800 Sobic008G099800 Sobic004G339100--Sobic008G099800 Sobic004G339100--Sobic001G534800 Sobic004G135400 Sobic004G135400 Sobic004G339100--Sobic004G135400 Sobic004G277200 Sobic004G277200 Sobic004G339100--Sobic004G277200 Sobic003G233600 Sobic003G233600 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic002G308500 Sobic002G308500 Sobic004G127700--Sobic002G308500 Sobic004G127700--Sobic004G339100 Sobic004G127700--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic004G127700--Sobic001G111150 Sobic009G139900 Sobic009G139900 Sobic004G127700--Sobic009G139900 Sobic004G127700--Sobic009G057300 Sobic004G136300 Sobic004G136300 Sobic004G127700--Sobic004G136300 Sobic009G220800 Sobic009G220800 Sobic001G328000--Sobic009G220800 Sobic002G114800 Sobic002G114800 Sobic001G328000--Sobic002G114800 Sobic007G092600 Sobic007G092600 Sobic001G328000--Sobic007G092600 Sobic001G328000--Sobic007G128600 Sobic005G024900 Sobic005G024900 Sobic001G328000--Sobic005G024900 Sobic003G106300 Sobic003G106300 Sobic001G328000--Sobic003G106300 Sobic001G540100 Sobic001G540100 Sobic001G328000--Sobic001G540100 Sobic009G177400 Sobic009G177400 Sobic001G328000--Sobic009G177400 Sobic005G075600 Sobic005G075600 Sobic001G328000--Sobic005G075600 Sobic003G428400--Sobic007G068100 Sobic003G428400--Sobic001G474500 Sobic003G428400--Sobic001G325200 Sobic001G015500 Sobic001G015500 Sobic003G428400--Sobic001G015500 Sobic010G205200 Sobic010G205200 Sobic003G428400--Sobic010G205200 Sobic001G069900 Sobic001G069900 Sobic003G428400--Sobic001G069900 Sobic003G428400--Sobic009G057300 Sobic001G438600 Sobic001G438600 Sobic003G428400--Sobic001G438600 Sobic010G112300 Sobic010G112300 Sobic003G428400--Sobic010G112300 Sobic002G398100--Sobic004G002100 Sobic002G137400 Sobic002G137400 Sobic002G398100--Sobic002G137400 Sobic002G398100--Sobic004G113400 Sobic001G415300 Sobic001G415300 Sobic002G398100--Sobic001G415300 Sobic008G167800 Sobic008G167800 Sobic002G398100--Sobic008G167800 Sobic002G398100--Sobic001G534800 Sobic010G004100 Sobic010G004100 Sobic002G398100--Sobic010G004100 Sobic002G430000 Sobic002G430000 Sobic002G398100--Sobic002G430000 Sobic004G125900 Sobic004G125900 Sobic002G398100--Sobic004G125900
Octagon: transcription factors


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