Gene annotation
Transcriptome id Sobic.002G398100.1
Synonym Sb02g041280
Functional annotation RGH1A, putative, expressed
UniProt A0A1B6QFW5
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF537
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g13430.1 : RGH1A, putative, expressed
MaizeGDB (Corn) Zm00025a015323
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G002100 G-protein alpha subunit, putative, expressed -
2 Sobic.002G137400 protein binding protein, putative, expressed -
3 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
4 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
5 Sobic.008G167800 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
6 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
7 Sobic.010G004100 expressed protein -
8 Sobic.002G430000 expressed protein K08518: STXBP5, syntaxin-binding protein 5
9 Sobic.004G125900 ethylene-responsive protein related, putative, expressed -
10 Sobic.007G128600 CC-NBS-LRR protein, putative, expressed -
11 Sobic.009G094300 emp24/gp25L/p24 family protein, putative, expressed -
12 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
13 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.008G099800 expressed protein -
15 Sobic.004G329400 formin, putative, expressed -
16 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
17 Sobic.001G411800 - -
18 Sobic.002G270500 UBX domain-containing protein, putative, expressed -
19 Sobic.007G024700 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1


Gene co-expression network
sample Sobic002G398100 Sobic002G398100 Sobic004G002100 Sobic004G002100 Sobic002G398100--Sobic004G002100 Sobic002G137400 Sobic002G137400 Sobic002G398100--Sobic002G137400 Sobic004G113400 Sobic004G113400 Sobic002G398100--Sobic004G113400 Sobic001G415300 Sobic001G415300 Sobic002G398100--Sobic001G415300 Sobic008G167800 Sobic008G167800 Sobic002G398100--Sobic008G167800 Sobic001G534800 Sobic001G534800 Sobic002G398100--Sobic001G534800 Sobic010G004100 Sobic010G004100 Sobic002G398100--Sobic010G004100 Sobic002G430000 Sobic002G430000 Sobic002G398100--Sobic002G430000 Sobic004G125900 Sobic004G125900 Sobic002G398100--Sobic004G125900 Sobic004G002100--Sobic002G137400 Sobic004G002100--Sobic001G534800 Sobic002G031100 Sobic002G031100 Sobic004G002100--Sobic002G031100 Sobic004G002100--Sobic001G415300 Sobic001G281100 Sobic001G281100 Sobic004G002100--Sobic001G281100 Sobic004G002400 Sobic004G002400 Sobic004G002100--Sobic004G002400 Sobic001G413900 Sobic001G413900 Sobic004G002100--Sobic001G413900 Sobic006G126100 Sobic006G126100 Sobic004G002100--Sobic006G126100 Sobic004G004300 Sobic004G004300 Sobic004G002100--Sobic004G004300 Sobic002G137400--Sobic001G415300 Sobic002G137400--Sobic004G002100 Sobic002G137400--Sobic010G004100 Sobic003G337300 Sobic003G337300 Sobic002G137400--Sobic003G337300 Sobic003G331400 Sobic003G331400 Sobic002G137400--Sobic003G331400 Sobic002G137400--Sobic001G281100 Sobic002G137400--Sobic004G004300 Sobic002G137400--Sobic001G534800 Sobic002G137400--Sobic002G031100 Sobic009G010600 Sobic009G010600 Sobic004G113400--Sobic009G010600 Sobic003G408600 Sobic003G408600 Sobic004G113400--Sobic003G408600 Sobic004G329400 Sobic004G329400 Sobic004G113400--Sobic004G329400 Sobic001G058700 Sobic001G058700 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic001G178700 Sobic001G178700 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic004G113400--Sobic001G534800 Sobic004G113400--Sobic002G430000 Sobic001G415300--Sobic002G137400 Sobic001G415300--Sobic004G004300 Sobic001G415300--Sobic001G281100 Sobic001G085300 Sobic001G085300 Sobic001G415300--Sobic001G085300 Sobic001G415300--Sobic003G337300 Sobic001G415300--Sobic006G126100 Sobic001G415300--Sobic001G534800 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900 Sobic009G094300 Sobic009G094300 Sobic008G167800--Sobic009G094300 Sobic008G167800--Sobic004G329400 Sobic003G014500 Sobic003G014500 Sobic008G167800--Sobic003G014500 Sobic008G167800--Sobic004G113400 Sobic010G112300 Sobic010G112300 Sobic008G167800--Sobic010G112300 Sobic008G167800--Sobic008G099800 Sobic003G259100 Sobic003G259100 Sobic008G167800--Sobic003G259100 Sobic001G050600 Sobic001G050600 Sobic008G167800--Sobic001G050600 Sobic009G165400 Sobic009G165400 Sobic008G167800--Sobic009G165400 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic001G534800--Sobic004G004300 Sobic004G135400 Sobic004G135400 Sobic001G534800--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic001G534800--Sobic005G003300 Sobic005G026200 Sobic005G026200 Sobic001G534800--Sobic005G026200 Sobic006G012500 Sobic006G012500 Sobic001G534800--Sobic006G012500 Sobic001G534800--Sobic004G113400 Sobic001G065000 Sobic001G065000 Sobic001G534800--Sobic001G065000 Sobic007G163100 Sobic007G163100 Sobic010G004100--Sobic007G163100 Sobic010G004100--Sobic001G117200 Sobic010G004100--Sobic002G137400 Sobic010G004100--Sobic003G337300 Sobic003G104000 Sobic003G104000 Sobic010G004100--Sobic003G104000 Sobic010G004100--Sobic004G113400 Sobic010G004100--Sobic003G408600 Sobic010G004100--Sobic004G004300 Sobic010G004100--Sobic001G415300 Sobic001G207400 Sobic001G207400 Sobic002G430000--Sobic001G207400 Sobic002G430000--Sobic001G117200 Sobic004G355000 Sobic004G355000 Sobic002G430000--Sobic004G355000 Sobic008G098900 Sobic008G098900 Sobic002G430000--Sobic008G098900 Sobic001G016700 Sobic001G016700 Sobic002G430000--Sobic001G016700 Sobic002G430000--Sobic004G113400 Sobic010G139600 Sobic010G139600 Sobic002G430000--Sobic010G139600 Sobic008G092600 Sobic008G092600 Sobic002G430000--Sobic008G092600 Sobic003G110000 Sobic003G110000 Sobic002G430000--Sobic003G110000 Sobic004G125900--Sobic001G415300 Sobic002G270500 Sobic002G270500 Sobic004G125900--Sobic002G270500 Sobic009G126900 Sobic009G126900 Sobic004G125900--Sobic009G126900 Sobic006G271200 Sobic006G271200 Sobic004G125900--Sobic006G271200 Sobic004G125900--Sobic003G331400 Sobic009G000200 Sobic009G000200 Sobic004G125900--Sobic009G000200 Sobic001G107600 Sobic001G107600 Sobic004G125900--Sobic001G107600 Sobic004G125900--Sobic002G031100 Sobic006G034000 Sobic006G034000 Sobic004G125900--Sobic006G034000
Octagon: transcription factors


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