Gene annotation
Transcriptome id Sobic.001G322700.1
Synonym OXP1, Sb01g031300
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
5-oxoprolinase, putative, expressed
UniProt C5WUM9
Pfam PF05378 PF01968 PF02538
Panther DB PTHR11365 PTHR11365:SF2
NCBI CDD -
KEGG Orthology K01469; OPLAH, OXP1, 5-oxoprolinase (ATP-hydrolysing)
Gene Ontology GO:0016787; hydrolase activity GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G37830 : oxoprolinase 1
RAP-DB (Rice) LOC_Os01g73514.1 : 5-oxoprolinase, putative, expressed
MaizeGDB (Corn) Zm00025a003062
Brachypodium KQJ97492
Barley HORVU6Hr1G076190.2 , HORVU6Hr1G076190.1
Wheat TraesCS6A02G308800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G329400 dihydropyrimidinase, putative, expressed K01464: DPYS, dht, dihydropyrimidinase
2 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
3 Sobic.007G068100 aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
4 Sobic.009G057300 acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
5 Sobic.004G101900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@citrate synthase, putative, expressed K01647: CS, citrate synthase
6 Sobic.010G107000 phosphatidylinositol-4-phosphate 5-Kinase family protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
7 Sobic.003G149200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
8 Sobic.001G015500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
9 Sobic.002G304000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nitrilase, putative, expressed K01431: UPB1, beta-ureidopropionase
10 Sobic.003G354400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyl-coenzyme A oxidase, putative, expressed K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase
11 Sobic.003G388251 - K01166: ribonuclease T2
12 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
14 Sobic.003G428400 beta-galactosidase, putative, expressed K01190: beta-galactosidase
15 Sobic.003G148800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K09699: DBT, 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
16 Sobic.003G138200 expressed protein -
17 Sobic.001G301700 MYB family transcription factor, putative, expressed K09522: DnaJ homolog subfamily C member 2
18 Sobic.006G030700 receptor kinase, putative, expressed -
19 Sobic.008G062200 dehydrogenase E1 component domain containing protein, expressed K00166: BCKDHA, 2-oxoisovalerate dehydrogenase E1 component alpha subunit
20 Sobic.001G512800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase


Gene co-expression network
sample Sobic001G322700 Sobic001G322700 Sobic003G329400 Sobic003G329400 Sobic001G322700--Sobic003G329400 Sobic001G325200 Sobic001G325200 Sobic001G322700--Sobic001G325200 Sobic007G068100 Sobic007G068100 Sobic001G322700--Sobic007G068100 Sobic009G057300 Sobic009G057300 Sobic001G322700--Sobic009G057300 Sobic004G101900 Sobic004G101900 Sobic001G322700--Sobic004G101900 Sobic010G107000 Sobic010G107000 Sobic001G322700--Sobic010G107000 Sobic003G149200 Sobic003G149200 Sobic001G322700--Sobic003G149200 Sobic001G015500 Sobic001G015500 Sobic001G322700--Sobic001G015500 Sobic002G304000 Sobic002G304000 Sobic001G322700--Sobic002G304000 Sobic003G329400--Sobic001G322700 Sobic008G062200 Sobic008G062200 Sobic003G329400--Sobic008G062200 Sobic003G329400--Sobic001G325200 Sobic003G329400--Sobic010G107000 Sobic003G329400--Sobic002G304000 Sobic003G329400--Sobic007G068100 Sobic009G226300 Sobic009G226300 Sobic003G329400--Sobic009G226300 Sobic003G148800 Sobic003G148800 Sobic003G329400--Sobic003G148800 Sobic003G354400 Sobic003G354400 Sobic003G329400--Sobic003G354400 Sobic001G325200--Sobic007G068100 Sobic001G325200--Sobic009G226300 Sobic001G325200--Sobic003G148800 Sobic004G321800 Sobic004G321800 Sobic001G325200--Sobic004G321800 Sobic001G325200--Sobic004G101900 Sobic001G325200--Sobic002G304000 Sobic009G054500 Sobic009G054500 Sobic001G325200--Sobic009G054500 Sobic001G325200--Sobic001G015500 Sobic003G355600 Sobic003G355600 Sobic001G325200--Sobic003G355600 Sobic007G068100--Sobic001G325200 Sobic001G474500 Sobic001G474500 Sobic007G068100--Sobic001G474500 Sobic003G388251 Sobic003G388251 Sobic007G068100--Sobic003G388251 Sobic007G068100--Sobic003G148800 Sobic007G068100--Sobic009G057300 Sobic007G068100--Sobic004G101900 Sobic003G428400 Sobic003G428400 Sobic007G068100--Sobic003G428400 Sobic007G068100--Sobic009G226300 Sobic007G068100--Sobic004G321800 Sobic003G061800 Sobic003G061800 Sobic009G057300--Sobic003G061800 Sobic009G057300--Sobic001G474500 Sobic009G057300--Sobic007G068100 Sobic009G057300--Sobic001G325200 Sobic009G057300--Sobic003G388251 Sobic009G057300--Sobic003G329400 Sobic009G057300--Sobic003G354400 Sobic001G334600 Sobic001G334600 Sobic009G057300--Sobic001G334600 Sobic009G057300--Sobic001G322700 Sobic004G101900--Sobic002G304000 Sobic002G215700 Sobic002G215700 Sobic004G101900--Sobic002G215700 Sobic004G101900--Sobic001G325200 Sobic004G101900--Sobic009G226300 Sobic004G101900--Sobic009G054500 Sobic004G101900--Sobic008G062200 Sobic004G101900--Sobic003G148800 Sobic004G124200 Sobic004G124200 Sobic004G101900--Sobic004G124200 Sobic004G101900--Sobic001G015500 Sobic009G211400 Sobic009G211400 Sobic010G107000--Sobic009G211400 Sobic010G107000--Sobic001G325200 Sobic009G193700 Sobic009G193700 Sobic010G107000--Sobic009G193700 Sobic010G107000--Sobic003G355600 Sobic003G219600 Sobic003G219600 Sobic010G107000--Sobic003G219600 Sobic001G150200 Sobic001G150200 Sobic010G107000--Sobic001G150200 Sobic009G029600 Sobic009G029600 Sobic010G107000--Sobic009G029600 Sobic010G107000--Sobic009G226300 Sobic003G138200 Sobic003G138200 Sobic010G107000--Sobic003G138200 Sobic003G149200--Sobic001G322700 Sobic006G091700 Sobic006G091700 Sobic003G149200--Sobic006G091700 Sobic005G215900 Sobic005G215900 Sobic003G149200--Sobic005G215900 Sobic006G030700 Sobic006G030700 Sobic003G149200--Sobic006G030700 Sobic009G161000 Sobic009G161000 Sobic003G149200--Sobic009G161000 Sobic005G216000 Sobic005G216000 Sobic003G149200--Sobic005G216000 Sobic001G249300 Sobic001G249300 Sobic003G149200--Sobic001G249300 Sobic003G087200 Sobic003G087200 Sobic003G149200--Sobic003G087200 Sobic003G149200--Sobic004G101900 Sobic001G069900 Sobic001G069900 Sobic001G015500--Sobic001G069900 Sobic001G015500--Sobic001G325200 Sobic001G015500--Sobic006G091700 Sobic001G015500--Sobic003G087200 Sobic001G015500--Sobic004G101900 Sobic005G178100 Sobic005G178100 Sobic001G015500--Sobic005G178100 Sobic001G015500--Sobic004G124200 Sobic001G150600 Sobic001G150600 Sobic001G015500--Sobic001G150600 Sobic007G186200 Sobic007G186200 Sobic001G015500--Sobic007G186200 Sobic002G304000--Sobic009G226300 Sobic002G304000--Sobic009G054500 Sobic002G304000--Sobic004G101900 Sobic002G304000--Sobic003G148800 Sobic002G304000--Sobic002G215700 Sobic002G304000--Sobic008G062200 Sobic002G304000--Sobic001G325200 Sobic002G304000--Sobic003G355600 Sobic003G105800 Sobic003G105800 Sobic002G304000--Sobic003G105800
Octagon: transcription factors


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