Gene annotation
Transcriptome id Sobic.001G427200.1
Synonym Sb01g040140, JOSL
Functional annotation josephin, putative, expressed
UniProt C5WQ53
Pfam PF02099
Panther DB PTHR13291 PTHR13291:SF0
NCBI CDD KOG2934; Uncharacterized conserved protein, contains Josephin domain
KEGG Orthology K15235; josephin
Gene Ontology GO:0008242; omega peptidase activity


Orthologs (automatic annotation)
TAIR AT2G29640 : JOSEPHIN-like protein
RAP-DB (Rice) LOC_Os03g15850.1 : josephin, putative, expressed
MaizeGDB (Corn) Zm00025a001723
Brachypodium KQK22434 , PNT77694 , KQK22433
Barley HORVU4Hr1G061050.1 , HORVU4Hr1G061050.2
Wheat TraesCS4A02G090700 , TraesCS4D02G214600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G436300 expressed protein -
2 Sobic.003G217400 zinc finger, C3HC4 type family protein, expressed -
3 Sobic.004G174100 expressed protein -
4 Sobic.003G077900 vacuolar protein sorting-associating protein 4B, putative, expressed K12196: vacuolar protein-sorting-associated protein 4
5 Sobic.002G251700 no apical meristem protein, putative, expressed -
6 Sobic.010G090900 membrane-anchored ubiquitin-fold protein, putative, expressed -
7 Sobic.003G116900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
8 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
10 Sobic.002G320100 expressed protein -
11 Sobic.009G099500 expressed protein -
12 Sobic.004G293000 MSP domain containing protein, expressed -
13 Sobic.002G130700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed -
14 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
15 Sobic.009G210600 GTPase-activating protein, putative, expressed -
16 Sobic.001G427500 B4-BTB2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
17 Sobic.002G431600 protein kinase APK1B, chloroplast precursor, putative, expressed -
18 Sobic.002G339500 diacylglycerol kinase, putative, expressed K04718: sphingosine kinase
19 Sobic.007G007000 DUF250 domain containing protein, putative, expressed K15356: VRG4, GDP-mannose transporter
20 Sobic.004G348900 expressed protein -


Gene co-expression network
sample Sobic001G427200 Sobic001G427200 Sobic003G436300 Sobic003G436300 Sobic001G427200--Sobic003G436300 Sobic003G217400 Sobic003G217400 Sobic001G427200--Sobic003G217400 Sobic004G174100 Sobic004G174100 Sobic001G427200--Sobic004G174100 Sobic003G077900 Sobic003G077900 Sobic001G427200--Sobic003G077900 Sobic002G251700 Sobic002G251700 Sobic001G427200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G427200--Sobic010G090900 Sobic003G116900 Sobic003G116900 Sobic001G427200--Sobic003G116900 Sobic005G044800 Sobic005G044800 Sobic001G427200--Sobic005G044800 Sobic003G299000 Sobic003G299000 Sobic001G427200--Sobic003G299000 Sobic006G034000 Sobic006G034000 Sobic003G436300--Sobic006G034000 Sobic001G085100 Sobic001G085100 Sobic003G436300--Sobic001G085100 Sobic010G020300 Sobic010G020300 Sobic003G436300--Sobic010G020300 Sobic001G057800 Sobic001G057800 Sobic003G436300--Sobic001G057800 Sobic003G436300--Sobic003G116900 Sobic003G312200 Sobic003G312200 Sobic003G436300--Sobic003G312200 Sobic001G323000 Sobic001G323000 Sobic003G436300--Sobic001G323000 Sobic004G348900 Sobic004G348900 Sobic003G436300--Sobic004G348900 Sobic001G296900 Sobic001G296900 Sobic003G436300--Sobic001G296900 Sobic003G261500 Sobic003G261500 Sobic003G217400--Sobic003G261500 Sobic003G217400--Sobic003G077900 Sobic009G004600 Sobic009G004600 Sobic003G217400--Sobic009G004600 Sobic002G400000 Sobic002G400000 Sobic003G217400--Sobic002G400000 Sobic001G314500 Sobic001G314500 Sobic003G217400--Sobic001G314500 Sobic010G000900 Sobic010G000900 Sobic003G217400--Sobic010G000900 Sobic009G198500 Sobic009G198500 Sobic003G217400--Sobic009G198500 Sobic001G051200 Sobic001G051200 Sobic003G217400--Sobic001G051200 Sobic007G168600 Sobic007G168600 Sobic003G217400--Sobic007G168600 Sobic004G174100--Sobic001G427200 Sobic006G242000 Sobic006G242000 Sobic004G174100--Sobic006G242000 Sobic002G130700 Sobic002G130700 Sobic004G174100--Sobic002G130700 Sobic005G064800 Sobic005G064800 Sobic004G174100--Sobic005G064800 Sobic001G022600 Sobic001G022600 Sobic004G174100--Sobic001G022600 Sobic002G193400 Sobic002G193400 Sobic004G174100--Sobic002G193400 Sobic008G142600 Sobic008G142600 Sobic004G174100--Sobic008G142600 Sobic004G293000 Sobic004G293000 Sobic004G174100--Sobic004G293000 Sobic004G253900 Sobic004G253900 Sobic004G174100--Sobic004G253900 Sobic003G077900--Sobic002G400000 Sobic003G077900--Sobic007G168600 Sobic003G077900--Sobic003G217400 Sobic010G188100 Sobic010G188100 Sobic003G077900--Sobic010G188100 Sobic004G060600 Sobic004G060600 Sobic003G077900--Sobic004G060600 Sobic001G220400 Sobic001G220400 Sobic003G077900--Sobic001G220400 Sobic003G077900--Sobic004G348900 Sobic009G219900 Sobic009G219900 Sobic003G077900--Sobic009G219900 Sobic004G130900 Sobic004G130900 Sobic003G077900--Sobic004G130900 Sobic006G225600 Sobic006G225600 Sobic002G251700--Sobic006G225600 Sobic003G295400 Sobic003G295400 Sobic002G251700--Sobic003G295400 Sobic004G234900 Sobic004G234900 Sobic002G251700--Sobic004G234900 Sobic001G098200 Sobic001G098200 Sobic002G251700--Sobic001G098200 Sobic010G009400 Sobic010G009400 Sobic002G251700--Sobic010G009400 Sobic002G251700--Sobic003G077900 Sobic002G251700--Sobic003G217400 Sobic007G007000 Sobic007G007000 Sobic002G251700--Sobic007G007000 Sobic002G251700--Sobic010G000900 Sobic004G301900 Sobic004G301900 Sobic010G090900--Sobic004G301900 Sobic010G090900--Sobic001G051200 Sobic010G090900--Sobic001G098200 Sobic001G123000 Sobic001G123000 Sobic010G090900--Sobic001G123000 Sobic006G119800 Sobic006G119800 Sobic010G090900--Sobic006G119800 Sobic004G119100 Sobic004G119100 Sobic010G090900--Sobic004G119100 Sobic003G250500 Sobic003G250500 Sobic010G090900--Sobic003G250500 Sobic001G263000 Sobic001G263000 Sobic010G090900--Sobic001G263000 Sobic002G092300 Sobic002G092300 Sobic010G090900--Sobic002G092300 Sobic003G116900--Sobic003G436300 Sobic001G270400 Sobic001G270400 Sobic003G116900--Sobic001G270400 Sobic004G337200 Sobic004G337200 Sobic003G116900--Sobic004G337200 Sobic008G074700 Sobic008G074700 Sobic003G116900--Sobic008G074700 Sobic003G116900--Sobic006G034000 Sobic002G105200 Sobic002G105200 Sobic003G116900--Sobic002G105200 Sobic003G116900--Sobic010G020300 Sobic003G365000 Sobic003G365000 Sobic003G116900--Sobic003G365000 Sobic007G024700 Sobic007G024700 Sobic003G116900--Sobic007G024700 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic003G012200 Sobic003G012200 Sobic005G044800--Sobic003G012200 Sobic003G372000 Sobic003G372000 Sobic005G044800--Sobic003G372000 Sobic006G244700 Sobic006G244700 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic004G127700 Sobic004G127700 Sobic005G044800--Sobic004G127700 Sobic002G116900 Sobic002G116900 Sobic005G044800--Sobic002G116900 Sobic003G273600 Sobic003G273600 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700 Sobic003G299000--Sobic003G077900 Sobic003G299000--Sobic004G348900 Sobic001G206900 Sobic001G206900 Sobic003G299000--Sobic001G206900 Sobic003G299000--Sobic003G436300 Sobic004G227300 Sobic004G227300 Sobic003G299000--Sobic004G227300 Sobic001G417900 Sobic001G417900 Sobic003G299000--Sobic001G417900 Sobic002G418700 Sobic002G418700 Sobic003G299000--Sobic002G418700 Sobic003G299000--Sobic003G217400 Sobic002G242200 Sobic002G242200 Sobic003G299000--Sobic002G242200
Octagon: transcription factors


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