Gene annotation
Transcriptome id Sobic.002G320100.1
Synonym Sb02g034860
Functional annotation expressed protein
UniProt A0A1B6QEJ9
Pfam PF03647
Panther DB PTHR12668 PTHR12668:SF14
NCBI CDD KOG4267; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G50740 : Transmembrane proteins 14C
RAP-DB (Rice) LOC_Os03g38790.1 : expressed protein
MaizeGDB (Corn) Zm00025a014800
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G320100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G034300 peptidyl-prolyl isomerase, putative, expressed -
2 Sobic.010G176500 expressed protein -
3 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
4 Sobic.004G358600 cation efflux family protein, putative, expressed K14692: SLC30A5_7, ZNT5_7, MTP, solute carrier family 30 (zinc transporter), member 5/7
5 Sobic.010G080200 emp24/gp25L/p24 family protein, putative, expressed -
6 Sobic.010G269100 zinc finger family protein, putative, expressed -
7 Sobic.003G012200 tRNA synthetases class II domain containing protein, expressed K01876: aspartyl-tRNA synthetase
8 Sobic.001G427200 josephin, putative, expressed K15235: josephin
9 Sobic.009G149500 coiled-coil domain-containing protein 47 precursor, putative, expressed -
10 Sobic.004G348900 expressed protein -
11 Sobic.003G436300 expressed protein -
12 Sobic.005G155700 methyltransferase, putative, expressed -
13 Sobic.009G238800 expressed protein -
14 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
15 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
16 Sobic.002G039000 ML domain protein, putative, expressed -
17 Sobic.007G077400 dehydrogenase, putative, expressed K07512: MECR, mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase
18 Sobic.001G199100 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
19 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
20 Sobic.004G119100 expressed protein -


Gene co-expression network
sample Sobic002G320100 Sobic002G320100 Sobic005G034300 Sobic005G034300 Sobic002G320100--Sobic005G034300 Sobic010G176500 Sobic010G176500 Sobic002G320100--Sobic010G176500 Sobic010G002400 Sobic010G002400 Sobic002G320100--Sobic010G002400 Sobic004G358600 Sobic004G358600 Sobic002G320100--Sobic004G358600 Sobic010G080200 Sobic010G080200 Sobic002G320100--Sobic010G080200 Sobic010G269100 Sobic010G269100 Sobic002G320100--Sobic010G269100 Sobic003G012200 Sobic003G012200 Sobic002G320100--Sobic003G012200 Sobic001G427200 Sobic001G427200 Sobic002G320100--Sobic001G427200 Sobic009G149500 Sobic009G149500 Sobic002G320100--Sobic009G149500 Sobic001G199100 Sobic001G199100 Sobic005G034300--Sobic001G199100 Sobic002G008800 Sobic002G008800 Sobic005G034300--Sobic002G008800 Sobic001G382600 Sobic001G382600 Sobic005G034300--Sobic001G382600 Sobic004G277200 Sobic004G277200 Sobic005G034300--Sobic004G277200 Sobic001G033500 Sobic001G033500 Sobic005G034300--Sobic001G033500 Sobic010G228500 Sobic010G228500 Sobic005G034300--Sobic010G228500 Sobic004G135400 Sobic004G135400 Sobic005G034300--Sobic004G135400 Sobic010G020400 Sobic010G020400 Sobic005G034300--Sobic010G020400 Sobic004G275700 Sobic004G275700 Sobic005G034300--Sobic004G275700 Sobic001G218800 Sobic001G218800 Sobic010G176500--Sobic001G218800 Sobic007G039400 Sobic007G039400 Sobic010G176500--Sobic007G039400 Sobic001G291800 Sobic001G291800 Sobic010G176500--Sobic001G291800 Sobic002G092300 Sobic002G092300 Sobic010G176500--Sobic002G092300 Sobic002G256200 Sobic002G256200 Sobic010G176500--Sobic002G256200 Sobic008G103300 Sobic008G103300 Sobic010G176500--Sobic008G103300 Sobic001G482900 Sobic001G482900 Sobic010G176500--Sobic001G482900 Sobic003G099300 Sobic003G099300 Sobic010G176500--Sobic003G099300 Sobic006G233300 Sobic006G233300 Sobic010G176500--Sobic006G233300 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic010G002400--Sobic004G275700 Sobic001G201500 Sobic001G201500 Sobic010G002400--Sobic001G201500 Sobic010G193900 Sobic010G193900 Sobic010G002400--Sobic010G193900 Sobic005G155700 Sobic005G155700 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic002G308500 Sobic002G308500 Sobic010G002400--Sobic002G308500 Sobic010G002400--Sobic003G012200 Sobic006G176600 Sobic006G176600 Sobic010G002400--Sobic006G176600 Sobic005G044800 Sobic005G044800 Sobic004G358600--Sobic005G044800 Sobic004G358600--Sobic003G012200 Sobic001G000200 Sobic001G000200 Sobic004G358600--Sobic001G000200 Sobic010G205800 Sobic010G205800 Sobic004G358600--Sobic010G205800 Sobic004G358600--Sobic010G002400 Sobic008G004600 Sobic008G004600 Sobic004G358600--Sobic008G004600 Sobic002G361300 Sobic002G361300 Sobic004G358600--Sobic002G361300 Sobic003G372000 Sobic003G372000 Sobic004G358600--Sobic003G372000 Sobic009G199200 Sobic009G199200 Sobic004G358600--Sobic009G199200 Sobic001G051200 Sobic001G051200 Sobic010G080200--Sobic001G051200 Sobic009G238800 Sobic009G238800 Sobic010G080200--Sobic009G238800 Sobic002G281300 Sobic002G281300 Sobic010G080200--Sobic002G281300 Sobic006G217700 Sobic006G217700 Sobic010G080200--Sobic006G217700 Sobic010G080200--Sobic005G155700 Sobic010G080200--Sobic001G033500 Sobic001G057800 Sobic001G057800 Sobic010G080200--Sobic001G057800 Sobic002G202400 Sobic002G202400 Sobic010G080200--Sobic002G202400 Sobic010G205300 Sobic010G205300 Sobic010G080200--Sobic010G205300 Sobic010G269100--Sobic003G099300 Sobic010G269100--Sobic002G256200 Sobic008G092300 Sobic008G092300 Sobic010G269100--Sobic008G092300 Sobic006G056200 Sobic006G056200 Sobic010G269100--Sobic006G056200 Sobic010G239800 Sobic010G239800 Sobic010G269100--Sobic010G239800 Sobic002G268400 Sobic002G268400 Sobic010G269100--Sobic002G268400 Sobic006G278700 Sobic006G278700 Sobic010G269100--Sobic006G278700 Sobic010G085200 Sobic010G085200 Sobic010G269100--Sobic010G085200 Sobic009G033900 Sobic009G033900 Sobic010G269100--Sobic009G033900 Sobic003G012200--Sobic001G199100 Sobic003G344900 Sobic003G344900 Sobic003G012200--Sobic003G344900 Sobic010G000900 Sobic010G000900 Sobic003G012200--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G012200--Sobic001G085100 Sobic004G348300 Sobic004G348300 Sobic003G012200--Sobic004G348300 Sobic009G075800 Sobic009G075800 Sobic003G012200--Sobic009G075800 Sobic003G012200--Sobic004G275700 Sobic009G259400 Sobic009G259400 Sobic003G012200--Sobic009G259400 Sobic001G047400 Sobic001G047400 Sobic003G012200--Sobic001G047400 Sobic003G436300 Sobic003G436300 Sobic001G427200--Sobic003G436300 Sobic003G217400 Sobic003G217400 Sobic001G427200--Sobic003G217400 Sobic004G174100 Sobic004G174100 Sobic001G427200--Sobic004G174100 Sobic003G077900 Sobic003G077900 Sobic001G427200--Sobic003G077900 Sobic002G251700 Sobic002G251700 Sobic001G427200--Sobic002G251700 Sobic010G090900 Sobic010G090900 Sobic001G427200--Sobic010G090900 Sobic003G116900 Sobic003G116900 Sobic001G427200--Sobic003G116900 Sobic001G427200--Sobic005G044800 Sobic003G299000 Sobic003G299000 Sobic001G427200--Sobic003G299000 Sobic001G206900 Sobic001G206900 Sobic009G149500--Sobic001G206900 Sobic009G149500--Sobic010G020400 Sobic007G188300 Sobic007G188300 Sobic009G149500--Sobic007G188300 Sobic009G149500--Sobic010G223300 Sobic001G014800 Sobic001G014800 Sobic009G149500--Sobic001G014800 Sobic009G192000 Sobic009G192000 Sobic009G149500--Sobic009G192000 Sobic004G181900 Sobic004G181900 Sobic009G149500--Sobic004G181900 Sobic004G010900 Sobic004G010900 Sobic009G149500--Sobic004G010900 Sobic009G149500--Sobic003G338500
Octagon: transcription factors


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