Gene annotation
Transcriptome id Sobic.007G077400.2,Sobic.007G077400.1
Synonym Sb07g006220
Functional annotation dehydrogenase, putative, expressed
UniProt C5YIW0
Pfam PF00107 PF08240
Panther DB PTHR11695:SF496 PTHR11695
NCBI CDD KOG0025; Zn2+-binding dehydrogenase (nuclear receptor binding factor-1)
KEGG Orthology K07512; MECR, mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase
Gene Ontology GO:0008270; zinc ion binding GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G45770 : Polyketide synthase, enoylreductase family protein
RAP-DB (Rice) LOC_Os11g01154.4,LOC_Os11g01154.1 : dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a029903
Brachypodium -
Barley HORVU5Hr1G049050.3 , HORVU5Hr1G049050.2 , HORVU5Hr1G049050.1 , HORVU5Hr1G049050.6 , HORVU5Hr1G049050.5 , HORVU5Hr1G049050.4
Wheat TraesCS5A02G156900 , TraesCS5D02G162300 , TraesCS5B02G155100
Populus -


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cDNA sequences
Sobic.007G077400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G184500 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
2 Sobic.006G182200 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
4 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
5 Sobic.004G353000 ABC transporter, ATP-binding protein, putative, expressed K06158: ATP-binding cassette, subfamily F, member 3
6 Sobic.002G418700 expressed protein -
7 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
8 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
9 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
10 Sobic.010G235200 oral cancer overexpressed protein 1, putative, expressed -
11 Sobic.008G110600 expressed protein -
12 Sobic.006G278700 expressed protein -
13 Sobic.009G058500 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
14 Sobic.002G283600 AGAP005770-PA, putative, expressed -
15 Sobic.003G187200 phox domain-containing protein, putative, expressed -
16 Sobic.009G207000 protein of unknown function DUF502 domain containing protein, expressed -
17 Sobic.004G339100 endoribonuclease, putative, expressed K06927: diphthine-ammonia ligase
18 Sobic.010G232900 surp module family protein, putative, expressed -
19 Sobic.001G091300 HTH DNA-binding protein, putative, expressed -
20 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE


Gene co-expression network
sample Sobic007G077400 Sobic007G077400 Sobic007G184500 Sobic007G184500 Sobic007G077400--Sobic007G184500 Sobic006G182200 Sobic006G182200 Sobic007G077400--Sobic006G182200 Sobic001G033500 Sobic001G033500 Sobic007G077400--Sobic001G033500 Sobic003G051200 Sobic003G051200 Sobic007G077400--Sobic003G051200 Sobic004G353000 Sobic004G353000 Sobic007G077400--Sobic004G353000 Sobic002G418700 Sobic002G418700 Sobic007G077400--Sobic002G418700 Sobic001G323000 Sobic001G323000 Sobic007G077400--Sobic001G323000 Sobic010G130000 Sobic010G130000 Sobic007G077400--Sobic010G130000 Sobic001G466700 Sobic001G466700 Sobic007G077400--Sobic001G466700 Sobic001G360200 Sobic001G360200 Sobic007G184500--Sobic001G360200 Sobic007G184500--Sobic001G033500 Sobic007G184500--Sobic007G077400 Sobic006G044600 Sobic006G044600 Sobic007G184500--Sobic006G044600 Sobic009G058500 Sobic009G058500 Sobic007G184500--Sobic009G058500 Sobic006G278700 Sobic006G278700 Sobic007G184500--Sobic006G278700 Sobic007G184500--Sobic004G353000 Sobic004G178200 Sobic004G178200 Sobic007G184500--Sobic004G178200 Sobic010G073100 Sobic010G073100 Sobic007G184500--Sobic010G073100 Sobic004G274200 Sobic004G274200 Sobic006G182200--Sobic004G274200 Sobic001G473600 Sobic001G473600 Sobic006G182200--Sobic001G473600 Sobic001G016000 Sobic001G016000 Sobic006G182200--Sobic001G016000 Sobic006G182200--Sobic004G353000 Sobic006G182200--Sobic001G360200 Sobic010G116600 Sobic010G116600 Sobic006G182200--Sobic010G116600 Sobic006G182200--Sobic001G466700 Sobic004G339100 Sobic004G339100 Sobic006G182200--Sobic004G339100 Sobic002G283600 Sobic002G283600 Sobic006G182200--Sobic002G283600 Sobic001G283200 Sobic001G283200 Sobic001G033500--Sobic001G283200 Sobic001G033500--Sobic007G184500 Sobic006G148200 Sobic006G148200 Sobic001G033500--Sobic006G148200 Sobic007G118000 Sobic007G118000 Sobic001G033500--Sobic007G118000 Sobic001G085100 Sobic001G085100 Sobic001G033500--Sobic001G085100 Sobic001G033500--Sobic010G073100 Sobic001G458700 Sobic001G458700 Sobic001G033500--Sobic001G458700 Sobic002G113800 Sobic002G113800 Sobic001G033500--Sobic002G113800 Sobic003G012200 Sobic003G012200 Sobic001G033500--Sobic003G012200 Sobic003G248500 Sobic003G248500 Sobic003G051200--Sobic003G248500 Sobic004G283000 Sobic004G283000 Sobic003G051200--Sobic004G283000 Sobic001G390500 Sobic001G390500 Sobic003G051200--Sobic001G390500 Sobic002G378200 Sobic002G378200 Sobic003G051200--Sobic002G378200 Sobic007G111100 Sobic007G111100 Sobic003G051200--Sobic007G111100 Sobic002G365100 Sobic002G365100 Sobic003G051200--Sobic002G365100 Sobic002G388200 Sobic002G388200 Sobic003G051200--Sobic002G388200 Sobic001G083600 Sobic001G083600 Sobic003G051200--Sobic001G083600 Sobic001G371200 Sobic001G371200 Sobic003G051200--Sobic001G371200 Sobic006G200700 Sobic006G200700 Sobic004G353000--Sobic006G200700 Sobic009G143800 Sobic009G143800 Sobic004G353000--Sobic009G143800 Sobic004G353000--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic004G353000--Sobic007G183900 Sobic002G371300 Sobic002G371300 Sobic004G353000--Sobic002G371300 Sobic002G371700 Sobic002G371700 Sobic004G353000--Sobic002G371700 Sobic009G044800 Sobic009G044800 Sobic004G353000--Sobic009G044800 Sobic004G353000--Sobic001G473600 Sobic001G291800 Sobic001G291800 Sobic004G353000--Sobic001G291800 Sobic002G418700--Sobic001G323000 Sobic006G194500 Sobic006G194500 Sobic002G418700--Sobic006G194500 Sobic001G117300 Sobic001G117300 Sobic002G418700--Sobic001G117300 Sobic003G312200 Sobic003G312200 Sobic002G418700--Sobic003G312200 Sobic002G418700--Sobic007G077400 Sobic001G143500 Sobic001G143500 Sobic002G418700--Sobic001G143500 Sobic009G228700 Sobic009G228700 Sobic002G418700--Sobic009G228700 Sobic002G418700--Sobic001G085100 Sobic004G059000 Sobic004G059000 Sobic002G418700--Sobic004G059000 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic001G323000--Sobic003G312200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G323000--Sobic001G085100 Sobic006G033200 Sobic006G033200 Sobic010G130000--Sobic006G033200 Sobic010G278200 Sobic010G278200 Sobic010G130000--Sobic010G278200 Sobic009G138100 Sobic009G138100 Sobic010G130000--Sobic009G138100 Sobic010G130000--Sobic006G034000 Sobic010G130000--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic010G130000--Sobic001G124200 Sobic001G390800 Sobic001G390800 Sobic010G130000--Sobic001G390800 Sobic010G130000--Sobic001G085100 Sobic008G124900 Sobic008G124900 Sobic010G130000--Sobic008G124900 Sobic006G252700 Sobic006G252700 Sobic001G466700--Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic001G466700--Sobic003G081000 Sobic001G466700--Sobic001G143500 Sobic001G466700--Sobic002G388200 Sobic001G466700--Sobic001G371200 Sobic004G021100 Sobic004G021100 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic009G056800 Sobic009G056800 Sobic001G466700--Sobic009G056800 Sobic007G118200 Sobic007G118200 Sobic001G466700--Sobic007G118200
Octagon: transcription factors


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