Gene annotation
Transcriptome id Sobic.002G418700.1
Synonym
Functional annotation expressed protein
UniProt C5X5K4
Pfam PF12274
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g46890.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.002G418700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
2 Sobic.006G194500 expressed protein -
3 Sobic.001G117300 expressed protein -
4 Sobic.003G312200 signal recognition particle 54 kDa protein, putative, expressed K03106: SRP54, signal recognition particle subunit SRP54
5 Sobic.007G077400 dehydrogenase, putative, expressed K07512: MECR, mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase
6 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
7 Sobic.009G228700 expressed protein -
8 Sobic.001G085100 expressed protein -
9 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
10 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
11 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase
12 Sobic.007G162800 expressed protein -
13 Sobic.007G097900 OsFBL45 - F-box domain and LRR containing protein, expressed -
14 Sobic.006G263900 ubiquinone biosynthesis protein COQ4, putative, expressed K18586: ubiquinone biosynthesis protein COQ4
15 Sobic.009G238800 expressed protein -
16 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
17 Sobic.004G068500 CUE domain containing protein, expressed -
18 Sobic.003G299000 protein of unknown function DUF1421 domain containing protein, expressed -
19 Sobic.001G206900 vacuolar protein-sorting protein bro1, putative, expressed K12200: PDCD6IP, ALIX, programmed cell death 6-interacting protein
20 Sobic.001G376800 - K13116: DDX41, ATP-dependent RNA helicase DDX41


Gene co-expression network
sample Sobic002G418700 Sobic002G418700 Sobic001G323000 Sobic001G323000 Sobic002G418700--Sobic001G323000 Sobic006G194500 Sobic006G194500 Sobic002G418700--Sobic006G194500 Sobic001G117300 Sobic001G117300 Sobic002G418700--Sobic001G117300 Sobic003G312200 Sobic003G312200 Sobic002G418700--Sobic003G312200 Sobic007G077400 Sobic007G077400 Sobic002G418700--Sobic007G077400 Sobic001G143500 Sobic001G143500 Sobic002G418700--Sobic001G143500 Sobic009G228700 Sobic009G228700 Sobic002G418700--Sobic009G228700 Sobic001G085100 Sobic001G085100 Sobic002G418700--Sobic001G085100 Sobic004G059000 Sobic004G059000 Sobic002G418700--Sobic004G059000 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic001G323000--Sobic003G312200 Sobic006G148200 Sobic006G148200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G323000--Sobic001G085100 Sobic006G194500--Sobic001G323000 Sobic006G194500--Sobic009G228700 Sobic010G130000 Sobic010G130000 Sobic006G194500--Sobic010G130000 Sobic009G138100 Sobic009G138100 Sobic006G194500--Sobic009G138100 Sobic002G352600 Sobic002G352600 Sobic006G194500--Sobic002G352600 Sobic006G194500--Sobic006G148200 Sobic001G466700 Sobic001G466700 Sobic006G194500--Sobic001G466700 Sobic006G194500--Sobic002G418700 Sobic006G249700 Sobic006G249700 Sobic006G194500--Sobic006G249700 Sobic001G117300--Sobic002G418700 Sobic001G117300--Sobic001G323000 Sobic001G117300--Sobic006G194500 Sobic001G117300--Sobic006G249700 Sobic001G117300--Sobic001G466700 Sobic001G117300--Sobic001G143500 Sobic001G117300--Sobic009G138100 Sobic006G217700 Sobic006G217700 Sobic001G117300--Sobic006G217700 Sobic007G162800 Sobic007G162800 Sobic001G117300--Sobic007G162800 Sobic003G312200--Sobic006G034000 Sobic001G091300 Sobic001G091300 Sobic003G312200--Sobic001G091300 Sobic003G312200--Sobic001G323000 Sobic003G312200--Sobic001G206900 Sobic003G312200--Sobic009G228700 Sobic001G261436 Sobic001G261436 Sobic003G312200--Sobic001G261436 Sobic003G312200--Sobic001G085100 Sobic003G312200--Sobic010G130000 Sobic005G074500 Sobic005G074500 Sobic003G312200--Sobic005G074500 Sobic007G184500 Sobic007G184500 Sobic007G077400--Sobic007G184500 Sobic006G182200 Sobic006G182200 Sobic007G077400--Sobic006G182200 Sobic001G033500 Sobic001G033500 Sobic007G077400--Sobic001G033500 Sobic003G051200 Sobic003G051200 Sobic007G077400--Sobic003G051200 Sobic004G353000 Sobic004G353000 Sobic007G077400--Sobic004G353000 Sobic007G077400--Sobic002G418700 Sobic007G077400--Sobic001G323000 Sobic007G077400--Sobic010G130000 Sobic007G077400--Sobic001G466700 Sobic006G252700 Sobic006G252700 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic004G350100 Sobic004G350100 Sobic001G143500--Sobic004G350100 Sobic003G401100 Sobic003G401100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G143500--Sobic006G267300 Sobic004G066200 Sobic004G066200 Sobic009G228700--Sobic004G066200 Sobic009G228700--Sobic009G207000 Sobic009G228700--Sobic001G091300 Sobic009G228700--Sobic001G323000 Sobic001G356600 Sobic001G356600 Sobic009G228700--Sobic001G356600 Sobic009G228700--Sobic006G249700 Sobic009G228700--Sobic006G148200 Sobic009G228700--Sobic003G312200 Sobic001G124200 Sobic001G124200 Sobic009G228700--Sobic001G124200 Sobic006G101700 Sobic006G101700 Sobic001G085100--Sobic006G101700 Sobic001G085100--Sobic001G261436 Sobic001G085100--Sobic006G148200 Sobic007G167900 Sobic007G167900 Sobic001G085100--Sobic007G167900 Sobic001G085100--Sobic001G206900 Sobic001G047400 Sobic001G047400 Sobic001G085100--Sobic001G047400 Sobic001G085100--Sobic004G066200 Sobic001G085100--Sobic001G091300 Sobic003G012200 Sobic003G012200 Sobic001G085100--Sobic003G012200 Sobic004G305600 Sobic004G305600 Sobic004G059000--Sobic004G305600 Sobic001G061700 Sobic001G061700 Sobic004G059000--Sobic001G061700 Sobic003G250500 Sobic003G250500 Sobic004G059000--Sobic003G250500 Sobic007G019800 Sobic007G019800 Sobic004G059000--Sobic007G019800 Sobic004G253000 Sobic004G253000 Sobic004G059000--Sobic004G253000 Sobic001G131800 Sobic001G131800 Sobic004G059000--Sobic001G131800 Sobic002G256300 Sobic002G256300 Sobic004G059000--Sobic002G256300 Sobic002G365100 Sobic002G365100 Sobic004G059000--Sobic002G365100 Sobic003G405700 Sobic003G405700 Sobic004G059000--Sobic003G405700
Octagon: transcription factors


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