Gene annotation
Transcriptome id Sobic.001G117300.1
Synonym Sb01g010350
Functional annotation expressed protein
UniProt C5WN36
Pfam PF09790
Panther DB PTHR31220 PTHR31220:SF2
NCBI CDD KOG4688; Putative beta-catenin-Tcf/Lef signaling pathway component DRCTNNB1A
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64090 : -
RAP-DB (Rice) LOC_Os11g06860.1 : expressed protein
MaizeGDB (Corn) Zm00025a056283 , Zm00025a039528 , Zm00025a023209
Brachypodium KQJ89216
Barley HORVU4Hr1G019850.3 , HORVU4Hr1G019850.2 , HORVU4Hr1G019850.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G117300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G418700 expressed protein -
2 Sobic.001G323000 UBX domain-containing protein, putative, expressed K18726: FAF2, FAS-associated factor 2
3 Sobic.006G194500 expressed protein -
4 Sobic.006G249700 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
5 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
6 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
7 Sobic.009G138100 disease resistance protein RGA3, putative, expressed -
8 Sobic.006G217700 gamma-soluble NSF attachment protein, putative, expressed -
9 Sobic.007G162800 expressed protein -
10 Sobic.001G124200 ethylene receptor, putative, expressed K14509: ETR, ethylene receptor
11 Sobic.002G143900 OsFBL19 - F-box domain and LRR containing protein, expressed K10273: F-box and leucine-rich repeat protein 7
12 Sobic.002G378800 GRAM domain containing protein, expressed -
13 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
14 Sobic.007G077400 dehydrogenase, putative, expressed K07512: MECR, mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase
15 Sobic.009G238800 expressed protein -
16 Sobic.010G129600 dual specificity protein phosphatase, putative, expressed K04459: DUSP, dual specificity MAP kinase phosphatase
17 Sobic.001G096000 CWF19-like 2, cell cycle control, putative, expressed -
18 Sobic.004G059000 serine/threonine-protein kinase HT1, putative, expressed -
19 Sobic.009G228700 expressed protein -
20 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase


Gene co-expression network
sample Sobic001G117300 Sobic001G117300 Sobic002G418700 Sobic002G418700 Sobic001G117300--Sobic002G418700 Sobic001G323000 Sobic001G323000 Sobic001G117300--Sobic001G323000 Sobic006G194500 Sobic006G194500 Sobic001G117300--Sobic006G194500 Sobic006G249700 Sobic006G249700 Sobic001G117300--Sobic006G249700 Sobic001G466700 Sobic001G466700 Sobic001G117300--Sobic001G466700 Sobic001G143500 Sobic001G143500 Sobic001G117300--Sobic001G143500 Sobic009G138100 Sobic009G138100 Sobic001G117300--Sobic009G138100 Sobic006G217700 Sobic006G217700 Sobic001G117300--Sobic006G217700 Sobic007G162800 Sobic007G162800 Sobic001G117300--Sobic007G162800 Sobic002G418700--Sobic001G323000 Sobic002G418700--Sobic006G194500 Sobic002G418700--Sobic001G117300 Sobic003G312200 Sobic003G312200 Sobic002G418700--Sobic003G312200 Sobic007G077400 Sobic007G077400 Sobic002G418700--Sobic007G077400 Sobic002G418700--Sobic001G143500 Sobic009G228700 Sobic009G228700 Sobic002G418700--Sobic009G228700 Sobic001G085100 Sobic001G085100 Sobic002G418700--Sobic001G085100 Sobic004G059000 Sobic004G059000 Sobic002G418700--Sobic004G059000 Sobic001G206900 Sobic001G206900 Sobic001G323000--Sobic001G206900 Sobic006G034000 Sobic006G034000 Sobic001G323000--Sobic006G034000 Sobic001G323000--Sobic009G228700 Sobic001G057800 Sobic001G057800 Sobic001G323000--Sobic001G057800 Sobic001G323000--Sobic003G312200 Sobic006G148200 Sobic006G148200 Sobic001G323000--Sobic006G148200 Sobic009G207000 Sobic009G207000 Sobic001G323000--Sobic009G207000 Sobic010G000900 Sobic010G000900 Sobic001G323000--Sobic010G000900 Sobic001G323000--Sobic001G085100 Sobic006G194500--Sobic001G323000 Sobic006G194500--Sobic009G228700 Sobic010G130000 Sobic010G130000 Sobic006G194500--Sobic010G130000 Sobic006G194500--Sobic009G138100 Sobic002G352600 Sobic002G352600 Sobic006G194500--Sobic002G352600 Sobic006G194500--Sobic006G148200 Sobic006G194500--Sobic001G466700 Sobic006G194500--Sobic002G418700 Sobic006G194500--Sobic006G249700 Sobic006G249700--Sobic009G228700 Sobic006G249700--Sobic009G207000 Sobic004G348300 Sobic004G348300 Sobic006G249700--Sobic004G348300 Sobic006G249700--Sobic003G312200 Sobic006G249700--Sobic002G352600 Sobic004G275700 Sobic004G275700 Sobic006G249700--Sobic004G275700 Sobic006G249700--Sobic001G323000 Sobic006G249700--Sobic006G148200 Sobic006G249700--Sobic009G138100 Sobic006G252700 Sobic006G252700 Sobic001G466700--Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic001G466700--Sobic003G081000 Sobic001G466700--Sobic001G143500 Sobic002G388200 Sobic002G388200 Sobic001G466700--Sobic002G388200 Sobic001G371200 Sobic001G371200 Sobic001G466700--Sobic001G371200 Sobic004G021100 Sobic004G021100 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic009G056800 Sobic009G056800 Sobic001G466700--Sobic009G056800 Sobic007G118200 Sobic007G118200 Sobic001G466700--Sobic007G118200 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic004G350100 Sobic004G350100 Sobic001G143500--Sobic004G350100 Sobic003G401100 Sobic003G401100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G143500--Sobic006G267300 Sobic010G278200 Sobic010G278200 Sobic009G138100--Sobic010G278200 Sobic009G138100--Sobic010G130000 Sobic003G248200 Sobic003G248200 Sobic009G138100--Sobic003G248200 Sobic001G124200 Sobic001G124200 Sobic009G138100--Sobic001G124200 Sobic006G033200 Sobic006G033200 Sobic009G138100--Sobic006G033200 Sobic009G138100--Sobic009G228700 Sobic004G066200 Sobic004G066200 Sobic009G138100--Sobic004G066200 Sobic009G219000 Sobic009G219000 Sobic009G138100--Sobic009G219000 Sobic009G138100--Sobic001G323000 Sobic010G017000 Sobic010G017000 Sobic006G217700--Sobic010G017000 Sobic009G238800 Sobic009G238800 Sobic006G217700--Sobic009G238800 Sobic006G217700--Sobic001G323000 Sobic010G016400 Sobic010G016400 Sobic006G217700--Sobic010G016400 Sobic004G054300 Sobic004G054300 Sobic006G217700--Sobic004G054300 Sobic004G132300 Sobic004G132300 Sobic006G217700--Sobic004G132300 Sobic006G217700--Sobic001G057800 Sobic001G033500 Sobic001G033500 Sobic006G217700--Sobic001G033500 Sobic007G148800 Sobic007G148800 Sobic006G217700--Sobic007G148800 Sobic001G096000 Sobic001G096000 Sobic007G162800--Sobic001G096000 Sobic009G226400 Sobic009G226400 Sobic007G162800--Sobic009G226400 Sobic007G184500 Sobic007G184500 Sobic007G162800--Sobic007G184500 Sobic003G006400 Sobic003G006400 Sobic007G162800--Sobic003G006400 Sobic003G214300 Sobic003G214300 Sobic007G162800--Sobic003G214300 Sobic007G162800--Sobic002G418700 Sobic007G162800--Sobic001G143500 Sobic009G131900 Sobic009G131900 Sobic007G162800--Sobic009G131900 Sobic008G004400 Sobic008G004400 Sobic007G162800--Sobic008G004400
Octagon: transcription factors


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